RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 UBR5O95071 2799 aaPredicted RBP4.79□□□□□ -1.64
USP48-206ENST00000464577 NBPF19A0A087WUL8 3843 aa4.79□□□□□ -1.64
USP48-206ENST00000464577 FAM229BQ4G0N7 80 aa4.79□□□□□ -1.64
USP48-206ENST00000464577 ITPR3Q14573 2671 aa4.78□□□□□ -1.64
USP48-206ENST00000464577 H3BNG1 76 aa4.78□□□□□ -1.64
USP48-206ENST00000464577 KPRPQ5T749 579 aaPredicted RBP4.78□□□□□ -1.64
USP48-206ENST00000464577 Q8N377 158 aa4.78□□□□□ -1.64
USP48-206ENST00000464577 CACNA1AO00555 2505 aa4.78□□□□□ -1.64
USP48-206ENST00000464577 PIEZO1Q92508 2521 aa4.78□□□□□ -1.64
USP48-206ENST00000464577 FAM208BQ5VWN6 2430 aa4.78□□□□□ -1.64
USP48-206ENST00000464577 C3orf84H3BNL1 204 aa4.77□□□□□ -1.65
USP48-206ENST00000464577 HIGD2AQ9BW72 106 aa4.77□□□□□ -1.65
USP48-206ENST00000464577 Q6ZRP5 223 aa4.77□□□□□ -1.65
USP48-206ENST00000464577 WFDC10BQ8IUB3 73 aa4.77□□□□□ -1.65
USP48-206ENST00000464577 DHRS4-AS1Q9P1J3 65 aa4.77□□□□□ -1.65
USP48-206ENST00000464577 NKAPP1Q8N9T2 125 aa4.76□□□□□ -1.65
USP48-206ENST00000464577 PLA2G2DQ9UNK4 145 aa4.76□□□□□ -1.65
USP48-206ENST00000464577 ABCA12Q86UK0 2595 aa4.76□□□□□ -1.65
USP48-206ENST00000464577 SONP18583 2426 aaKnown RBP4.76□□□□□ -1.65
USP48-206ENST00000464577 FN1P02751 2386 aaKnown RBP4.76□□□□□ -1.65
USP48-206ENST00000464577 NIPBLQ6KC79 2804 aaeCLIP4.76□□□□□ -1.653e-6■■□□□ 13.7
USP48-206ENST00000464577 A0A1W2PNM2 257 aa4.76□□□□□ -1.65
USP48-206ENST00000464577 SMIM29Q86T20 159 aa4.76□□□□□ -1.65
USP48-206ENST00000464577 C7orf33Q8WU49 177 aa4.76□□□□□ -1.65
USP48-206ENST00000464577 BRK1Q8WUW1 75 aa4.76□□□□□ -1.65
USP48-206ENST00000464577 KRTAP17-1Q9BYP8 105 aa4.76□□□□□ -1.65
USP48-206ENST00000464577 ZNF462Q96JM2 2506 aa4.75□□□□□ -1.65
USP48-206ENST00000464577 SYCNQ0VAF6 134 aa4.75□□□□□ -1.65
USP48-206ENST00000464577 Q6ZRX8 168 aa4.75□□□□□ -1.65
USP48-206ENST00000464577 Q8NBF4 154 aa4.75□□□□□ -1.65
USP48-206ENST00000464577 ZCCHC13Q8WW36 166 aaKnown RBP4.75□□□□□ -1.65
USP48-206ENST00000464577 ANK3Q12955 4377 aaKnown RBP4.75□□□□□ -1.65
USP48-206ENST00000464577 CENPEQ02224 2701 aa4.75□□□□□ -1.65
USP48-206ENST00000464577 IGLV5-37A0A075B6J1 123 aa4.74□□□□□ -1.65
USP48-206ENST00000464577 hDV103S1A0JD37 113 aa4.74□□□□□ -1.65
USP48-206ENST00000464577 DEFB105AQ8NG35 78 aa4.74□□□□□ -1.65
USP48-206ENST00000464577 MPLKIPQ8TAP9 179 aa4.74□□□□□ -1.65
USP48-206ENST00000464577 SPRR4Q96PI1 79 aa4.74□□□□□ -1.65
USP48-206ENST00000464577 FAM30AQ9NZY2 134 aa4.74□□□□□ -1.65
USP48-206ENST00000464577 TLX1NBP0CAT3 122 aa4.74□□□□□ -1.65
USP48-206ENST00000464577 SPRR1AP35321 89 aa4.74□□□□□ -1.65
USP48-206ENST00000464577 SERTAD4-AS1Q5TG53 156 aa4.74□□□□□ -1.65
USP48-206ENST00000464577 NF1P21359 2839 aa4.73□□□□□ -1.65
USP48-206ENST00000464577 ETDCA0A1B0GVM5 59 aa4.73□□□□□ -1.65
USP48-206ENST00000464577 KRTAP4-16G5E9R7 235 aaPredicted RBP4.73□□□□□ -1.65
USP48-206ENST00000464577 C1orf137Q5JT78 98 aa4.73□□□□□ -1.65
USP48-206ENST00000464577 PKIGQ9Y2B9 76 aa4.73□□□□□ -1.65
USP48-206ENST00000464577 APCP25054 2843 aa4.73□□□□□ -1.65
USP48-206ENST00000464577 LINC01556Q5JQF7 62 aa4.73□□□□□ -1.65
USP48-206ENST00000464577 FLNAP21333 2647 aaKnown RBP4.72□□□□□ -1.65
USP48-206ENST00000464577 GCN1Q92616 2671 aaKnown RBP4.72□□□□□ -1.65
USP48-206ENST00000464577 DSCR10P59022 87 aa4.72□□□□□ -1.65
USP48-206ENST00000464577 Q1T7F1 81 aa4.72□□□□□ -1.65
USP48-206ENST00000464577 Q9BRP9 147 aa4.72□□□□□ -1.65
USP48-206ENST00000464577 ZFYVE26Q68DK2 2539 aa4.72□□□□□ -1.65
USP48-206ENST00000464577 C1orf195Q5TG92 126 aa4.71□□□□□ -1.65
USP48-206ENST00000464577 CYP4F30PQ9H0H9 118 aa4.71□□□□□ -1.65
USP48-206ENST00000464577 ZNF469Q96JG9 3925 aaPredicted RBP4.71□□□□□ -1.66
USP48-206ENST00000464577 IGLV1-50A0A075B6I6 118 aa4.71□□□□□ -1.66
USP48-206ENST00000464577 IGKV2D-24A0A075B6R9 120 aa4.71□□□□□ -1.66
USP48-206ENST00000464577 SETD2Q9BYW2 2564 aaPredicted RBP4.69□□□□□ -1.66
USP48-206ENST00000464577 C1orf64Q8NEQ6 169 aa4.69□□□□□ -1.66
USP48-206ENST00000464577 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.69□□□□□ -1.66
USP48-206ENST00000464577 HCG22E2RYF7 251 aa4.69□□□□□ -1.66
USP48-206ENST00000464577 K7EQZ3 153 aa4.69□□□□□ -1.66
USP48-206ENST00000464577 ST20-AS1Q8NBB2 130 aa4.69□□□□□ -1.66
USP48-206ENST00000464577 NBEAL2Q6ZNJ1 2754 aa4.69□□□□□ -1.66
USP48-206ENST00000464577 NDUFB1O75438 58 aa4.68□□□□□ -1.66
USP48-206ENST00000464577 PRR15Q8IV56 129 aa4.68□□□□□ -1.66
USP48-206ENST00000464577 CCDC168Q8NDH2 2452 aa4.68□□□□□ -1.66
USP48-206ENST00000464577 CUBNO60494 3623 aa4.68□□□□□ -1.66
USP48-206ENST00000464577 RPL37AP8A6NKH3 93 aa4.68□□□□□ -1.66
USP48-206ENST00000464577 USP24Q9UPU5 2620 aa4.67□□□□□ -1.66
USP48-206ENST00000464577 DNAH10OSP0CZ25 163 aa4.67□□□□□ -1.66
USP48-206ENST00000464577 MDFIQ99750 246 aa4.67□□□□□ -1.66
USP48-206ENST00000464577 KRTAP7-1Q8IUC3 87 aa4.66□□□□□ -1.66
USP48-206ENST00000464577 SMR3AQ99954 134 aa4.66□□□□□ -1.66
USP48-206ENST00000464577 V9GYY9 64 aa4.66□□□□□ -1.66
USP48-206ENST00000464577 FAM168BA1KXE4 195 aa4.66□□□□□ -1.66
USP48-206ENST00000464577 PSCAO43653 123 aa4.66□□□□□ -1.66
USP48-206ENST00000464577 MRPL55Q7Z7F7 128 aaKnown RBP4.66□□□□□ -1.66
USP48-206ENST00000464577 LINC00476Q8WZB0 136 aa4.66□□□□□ -1.66
USP48-206ENST00000464577 PDZD2O15018 2839 aa4.66□□□□□ -1.66
USP48-206ENST00000464577 RETNQ9HD89 108 aa4.65□□□□□ -1.66
USP48-206ENST00000464577 HIVEP2P31629 2446 aa4.65□□□□□ -1.67
USP48-206ENST00000464577 IGLV8-61A0A075B6I0 122 aa4.65□□□□□ -1.67
USP48-206ENST00000464577 MP68P56378 58 aa4.65□□□□□ -1.67
USP48-206ENST00000464577 UBE2BP63146 152 aa4.65□□□□□ -1.67
USP48-206ENST00000464577 MTORP42345 2549 aa4.64□□□□□ -1.67
USP48-206ENST00000464577 TRAV22A0A0B4J277 110 aa4.64□□□□□ -1.67
USP48-206ENST00000464577 REG3GQ6UW15 175 aa4.64□□□□□ -1.67
USP48-206ENST00000464577 DEFB131BA0A096LNP1 70 aa4.63□□□□□ -1.67
USP48-206ENST00000464577 H3BPC8 53 aa4.63□□□□□ -1.67
USP48-206ENST00000464577 IGFL1Q6UW32 110 aa4.63□□□□□ -1.67
USP48-206ENST00000464577 LRCOL1A6NCL2 159 aa4.63□□□□□ -1.67
USP48-206ENST00000464577 SPANXA2-OT1Q8N9U9 137 aa4.63□□□□□ -1.67
USP48-206ENST00000464577 KRTAP29-1A8MX34 341 aaPredicted RBP4.62□□□□□ -1.67
USP48-206ENST00000464577 ACANP16112 2415 aa4.62□□□□□ -1.67
USP48-206ENST00000464577 B9D2Q9BPU9 175 aa4.61□□□□□ -1.67
USP48-206ENST00000464577 LINC00588Q9Y4M8 146 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms