RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 A0A1B0GWB2 263 aa8.52□□□□□ -1.05
PHACTR4-203ENST00000463428 C1orf137Q5JT78 98 aa8.52□□□□□ -1.05
PHACTR4-203ENST00000463428 Q5VSD8 79 aa8.52□□□□□ -1.05
PHACTR4-203ENST00000463428 TRAV23DV6A0A075B6W5 121 aa8.51□□□□□ -1.05
PHACTR4-203ENST00000463428 BCE1O60756 84 aa8.51□□□□□ -1.05
PHACTR4-203ENST00000463428 HINT1P49773 126 aaPredicted RBP8.51□□□□□ -1.05
PHACTR4-203ENST00000463428 HERC2O95714 4834 aa8.5□□□□□ -1.05
PHACTR4-203ENST00000463428 M0R143 59 aa8.49□□□□□ -1.05
PHACTR4-203ENST00000463428 PLA2G1BP04054 148 aaKnown RBP8.49□□□□□ -1.05
PHACTR4-203ENST00000463428 IGLV7-43P04211 117 aa8.49□□□□□ -1.05
PHACTR4-203ENST00000463428 KRTAP13-1Q8IUC0 172 aa8.49□□□□□ -1.05
PHACTR4-203ENST00000463428 SMIM11BQ8TCY0 68 aa8.49□□□□□ -1.05
PHACTR4-203ENST00000463428 RAB37Q96AX2 223 aa8.49□□□□□ -1.05
PHACTR4-203ENST00000463428 NHP2Q9NX24 153 aaKnown RBP8.49□□□□□ -1.05
PHACTR4-203ENST00000463428 ZNF73O43830 326 aaPredicted RBP8.48□□□□□ -1.05
PHACTR4-203ENST00000463428 RPL13AP40429 203 aaKnown RBP8.48□□□□□ -1.05
PHACTR4-203ENST00000463428 PRO1854Q9UHT4 67 aa8.48□□□□□ -1.05
PHACTR4-203ENST00000463428 CBY1Q9Y3M2 126 aa8.48□□□□□ -1.05
PHACTR4-203ENST00000463428 K7ERJ3 54 aa8.47□□□□□ -1.05
PHACTR4-203ENST00000463428 KRTAP4-5Q9BYR2 181 aa8.47□□□□□ -1.05
PHACTR4-203ENST00000463428 B5MCH6 92 aa8.46□□□□□ -1.05
PHACTR4-203ENST00000463428 FAM19A1Q7Z5A9 133 aa8.46□□□□□ -1.05
PHACTR4-203ENST00000463428 H0Y9J4 135 aa8.46□□□□□ -1.06
PHACTR4-203ENST00000463428 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.06
PHACTR4-203ENST00000463428 C6orf99Q4VX62 202 aa8.46□□□□□ -1.06
PHACTR4-203ENST00000463428 ETDCA0A1B0GVM5 59 aa8.45□□□□□ -1.06
PHACTR4-203ENST00000463428 ZNF861PO60384 105 aa8.45□□□□□ -1.06
PHACTR4-203ENST00000463428 PRLHP81277 87 aa8.45□□□□□ -1.06
PHACTR4-203ENST00000463428 DIRC1Q969H9 104 aa8.45□□□□□ -1.06
PHACTR4-203ENST00000463428 SRRM2Q9UQ35 2752 aaKnown RBP8.44□□□□□ -1.06
PHACTR4-203ENST00000463428 TRBV7-6A0A0J9YX20 115 aa8.43□□□□□ -1.06
PHACTR4-203ENST00000463428 H7C2G1 150 aa8.43□□□□□ -1.06
PHACTR4-203ENST00000463428 UBE2AP49459 152 aa8.43□□□□□ -1.06
PHACTR4-203ENST00000463428 Q6ZRX8 168 aa8.43□□□□□ -1.06
PHACTR4-203ENST00000463428 PCP4L1A6NKN8 68 aa8.42□□□□□ -1.06
PHACTR4-203ENST00000463428 ELOF1P60002 83 aaKnown RBP8.42□□□□□ -1.06
PHACTR4-203ENST00000463428 SPINK6Q6UWN8 80 aa8.42□□□□□ -1.06
PHACTR4-203ENST00000463428 PKHD1L1Q86WI1 4243 aa8.42□□□□□ -1.06
PHACTR4-203ENST00000463428 COX7BP24311 80 aa8.41□□□□□ -1.06
PHACTR4-203ENST00000463428 Q9BRP9 147 aa8.41□□□□□ -1.06
PHACTR4-203ENST00000463428 TSPAN13O95857 204 aa8.4□□□□□ -1.06
PHACTR4-203ENST00000463428 BATFQ16520 125 aa8.4□□□□□ -1.06
PHACTR4-203ENST00000463428 SMCR5Q8TEV8 140 aa8.4□□□□□ -1.06
PHACTR4-203ENST00000463428 SNHG12Q9BXW3 62 aa8.4□□□□□ -1.06
PHACTR4-203ENST00000463428 Q1RN00 199 aa8.38□□□□□ -1.07
PHACTR4-203ENST00000463428 TRIAP1O43715 76 aa8.37□□□□□ -1.07
PHACTR4-203ENST00000463428 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
PHACTR4-203ENST00000463428 INAFM2P0DMQ5 153 aa8.37□□□□□ -1.07
PHACTR4-203ENST00000463428 HIGD2AQ9BW72 106 aa8.37□□□□□ -1.07
PHACTR4-203ENST00000463428 VAMP3Q15836 100 aa8.37□□□□□ -1.07
PHACTR4-203ENST00000463428 LINC00575Q6W349 94 aa8.35□□□□□ -1.07
PHACTR4-203ENST00000463428 DHRS4-AS1Q9P1J3 65 aa8.35□□□□□ -1.07
PHACTR4-203ENST00000463428 H0YGX0 51 aa8.34□□□□□ -1.07
PHACTR4-203ENST00000463428 FLG2Q5D862 2391 aaPredicted RBP8.34□□□□□ -1.07
PHACTR4-203ENST00000463428 TAX1BP3O14907 124 aa8.33□□□□□ -1.08
PHACTR4-203ENST00000463428 KRTAP1-4P0C5Y4 121 aa8.33□□□□□ -1.08
PHACTR4-203ENST00000463428 FAM218AQ96MZ4 157 aa8.33□□□□□ -1.08
PHACTR4-203ENST00000463428 PSMB2P49721 201 aa8.32□□□□□ -1.08
PHACTR4-203ENST00000463428 NAA38Q9BRA0 125 aaKnown RBP8.32□□□□□ -1.08
PHACTR4-203ENST00000463428 ABCA13Q86UQ4 5058 aa8.32□□□□□ -1.08
PHACTR4-203ENST00000463428 SPRR4Q96PI1 79 aa8.31□□□□□ -1.08
PHACTR4-203ENST00000463428 hADV29S1A0JD25 119 aa8.3□□□□□ -1.08
PHACTR4-203ENST00000463428 ST20-AS1Q8NBB2 130 aa8.3□□□□□ -1.08
PHACTR4-203ENST00000463428 C9orf118A6NHY6 69 aa8.29□□□□□ -1.08
PHACTR4-203ENST00000463428 COX6CP09669 75 aa8.29□□□□□ -1.08
PHACTR4-203ENST00000463428 COL5A1-AS1Q5SY13 56 aa8.29□□□□□ -1.08
PHACTR4-203ENST00000463428 CLEC2BQ92478 149 aa8.29□□□□□ -1.08
PHACTR4-203ENST00000463428 SLC25A20O43772 301 aa8.29□□□□□ -1.08
PHACTR4-203ENST00000463428 A0A1B0GX51 115 aa8.28□□□□□ -1.08
PHACTR4-203ENST00000463428 H3BUT2 72 aa8.28□□□□□ -1.08
PHACTR4-203ENST00000463428 LINC01547P58512 204 aaPredicted RBP8.28□□□□□ -1.08
PHACTR4-203ENST00000463428 ANAPC11Q9NYG5 84 aa8.28□□□□□ -1.08
PHACTR4-203ENST00000463428 SCGB1C2P0DMR2 95 aa8.27□□□□□ -1.09
PHACTR4-203ENST00000463428 LINC00483Q53H64 154 aa8.27□□□□□ -1.09
PHACTR4-203ENST00000463428 ZNF706Q9Y5V0 76 aaPredicted RBP8.27□□□□□ -1.09
PHACTR4-203ENST00000463428 SPRR1BP22528 89 aa8.26□□□□□ -1.09
PHACTR4-203ENST00000463428 LRP1Q07954 4544 aaKnown RBP8.25□□□□□ -1.09
PHACTR4-203ENST00000463428 IGLV5-48A0A075B6I7 105 aa8.25□□□□□ -1.09
PHACTR4-203ENST00000463428 LST1O00453 97 aa8.25□□□□□ -1.09
PHACTR4-203ENST00000463428 GAGE2AQ6NT46 116 aa8.25□□□□□ -1.09
PHACTR4-203ENST00000463428 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.25□□□□□ -1.09
PHACTR4-203ENST00000463428 Q6ZQY7 126 aa8.25□□□□□ -1.09
PHACTR4-203ENST00000463428 LINC01600Q96MT4 127 aa8.25□□□□□ -1.09
PHACTR4-203ENST00000463428 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
PHACTR4-203ENST00000463428 A0A087X002 238 aa8.23□□□□□ -1.09
PHACTR4-203ENST00000463428 A0A1W2PPM0 123 aa8.23□□□□□ -1.09
PHACTR4-203ENST00000463428 TCL1BO95988 128 aa8.23□□□□□ -1.09
PHACTR4-203ENST00000463428 FAM229BQ4G0N7 80 aa8.23□□□□□ -1.09
PHACTR4-203ENST00000463428 Q8N377 158 aa8.23□□□□□ -1.09
PHACTR4-203ENST00000463428 DEFB105AQ8NG35 78 aa8.22□□□□□ -1.09
PHACTR4-203ENST00000463428 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
PHACTR4-203ENST00000463428 TEX49A0A1B0GTD5 131 aa8.21□□□□□ -1.09
PHACTR4-203ENST00000463428 SNCGO76070 127 aa8.21□□□□□ -1.09
PHACTR4-203ENST00000463428 OXTP01178 125 aa8.21□□□□□ -1.09
PHACTR4-203ENST00000463428 TRACP01848 142 aa8.21□□□□□ -1.09
PHACTR4-203ENST00000463428 KRTAP13-2Q52LG2 175 aa8.21□□□□□ -1.09
PHACTR4-203ENST00000463428 SMIM29Q86T20 159 aa8.21□□□□□ -1.09
PHACTR4-203ENST00000463428 PRR26Q8N8Z3 221 aa8.21□□□□□ -1.09
PHACTR4-203ENST00000463428 KRTAP29-1A8MX34 341 aaPredicted RBP8.2□□□□□ -1.1
PHACTR4-203ENST00000463428 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms