RNA–Protein interactions for RNA: ENST00000463003.1

CHAMP1-202, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-202ENST00000463003 HMGA1P17096 107 aaKnown RBP0.14□□□□□ -2.39
CHAMP1-202ENST00000463003 PREX1Q8TCU6 1659 aa0.14□□□□□ -2.39
CHAMP1-202ENST00000463003 LRP1Q07954 4544 aaKnown RBP0.14□□□□□ -2.39
CHAMP1-202ENST00000463003 OTOGQ6ZRI0 2925 aa0.14□□□□□ -2.39
CHAMP1-202ENST00000463003 C2CD3Q4AC94 2353 aa0.13□□□□□ -2.39
CHAMP1-202ENST00000463003 STAB1Q9NY15 2570 aa0.13□□□□□ -2.39
CHAMP1-202ENST00000463003 CACNA1AO00555 2505 aa0.13□□□□□ -2.39
CHAMP1-202ENST00000463003 H0YGG7 62 aa0.13□□□□□ -2.39
CHAMP1-202ENST00000463003 ATXN8Q156A1 80 aa0.13□□□□□ -2.39
CHAMP1-202ENST00000463003 TNRC6CQ9HCJ0 1690 aaKnown RBP0.13□□□□□ -2.39
CHAMP1-202ENST00000463003 LTN1O94822 1766 aa0.13□□□□□ -2.39
CHAMP1-202ENST00000463003 DOPEY2Q9Y3R5 2298 aa0.13□□□□□ -2.39
CHAMP1-202ENST00000463003 CHD9Q3L8U1 2897 aa0.13□□□□□ -2.39
CHAMP1-202ENST00000463003 RICTORQ6R327 1708 aa0.13□□□□□ -2.39
CHAMP1-202ENST00000463003 PKDREJQ9NTG1 2253 aa0.12□□□□□ -2.39
CHAMP1-202ENST00000463003 RYR2Q92736 4967 aa0.12□□□□□ -2.39
CHAMP1-202ENST00000463003 SSPOA2VEC9 5147 aa0.12□□□□□ -2.39
CHAMP1-202ENST00000463003 ANK2Q01484 3957 aa0.12□□□□□ -2.39
CHAMP1-202ENST00000463003 NWD1Q149M9 1564 aa0.12□□□□□ -2.39
CHAMP1-202ENST00000463003 C3orf79P0CE67 100 aa0.12□□□□□ -2.39
CHAMP1-202ENST00000463003 QSER1Q2KHR3 1735 aa0.12□□□□□ -2.39
CHAMP1-202ENST00000463003 PDZD2O15018 2839 aa0.12□□□□□ -2.39
CHAMP1-202ENST00000463003 MAP3K1Q13233 1512 aa0.12□□□□□ -2.39
CHAMP1-202ENST00000463003 LMTK2Q8IWU2 1503 aa0.12□□□□□ -2.39
CHAMP1-202ENST00000463003 UGGT2Q9NYU1 1516 aa0.12□□□□□ -2.39
CHAMP1-202ENST00000463003 ZNF292O60281 2723 aa0.12□□□□□ -2.39
CHAMP1-202ENST00000463003 ARFGEF2Q9Y6D5 1785 aa0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 KMT2CQ8NEZ4 4911 aaKnown RBP0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 COL12A1Q99715 3063 aa0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 RYR1P21817 5038 aa0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 NEBP20929 6669 aa0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 BSNQ9UPA5 3926 aa0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 NBEAL2Q6ZNJ1 2754 aa0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 H0YAA0 97 aa0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 CRIP1P50238 77 aa0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 UBL5Q9BZL1 73 aa0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 IQGAP3Q86VI3 1631 aa0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 MAP1AP78559 2803 aaPredicted RBP0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 RNF213Q63HN8 5207 aa0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 DIP2AQ14689 1571 aa0.11□□□□□ -2.39
CHAMP1-202ENST00000463003 AKAP6Q13023 2319 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 KIAA1109Q2LD37 5005 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 AKAP13Q12802 2813 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 MYO5CQ9NQX4 1742 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 DSPP15924 2871 aaKnown RBP0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 UBR5O95071 2799 aaPredicted RBP0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 SCN11AQ9UI33 1791 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 DUOX2Q9NRD8 1548 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 COL7A1Q02388 2944 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 LCE6AA0A183 80 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 DEFB130BP0DP73 79 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 DEFB130AP0DP74 79 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 IAPPP10997 89 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 COX6B2Q6YFQ2 88 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 HERC1Q15751 4861 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 PLCH1Q4KWH8 1693 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 HRNRQ86YZ3 2850 aaPredicted RBP0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 PRRC2CQ9Y520 2896 aaKnown RBP0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 CFAP74Q9C0B2 1584 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 C4AP0C0L4 1744 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 C4BP0C0L5 1744 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 LRRIQ1Q96JM4 1722 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 CSMD3Q7Z407 3707 aa0.1□□□□□ -2.39
CHAMP1-202ENST00000463003 VWFP04275 2813 aa0.09□□□□□ -2.39
CHAMP1-202ENST00000463003 CHD6Q8TD26 2715 aa0.09□□□□□ -2.39
CHAMP1-202ENST00000463003 MAGI3Q5TCQ9 1506 aa0.09□□□□□ -2.39
CHAMP1-202ENST00000463003 TENM4Q6N022 2769 aa0.09□□□□□ -2.39
CHAMP1-202ENST00000463003 SPRR2DP22532 72 aa0.09□□□□□ -2.4
CHAMP1-202ENST00000463003 ABCA8O94911 1581 aa0.09□□□□□ -2.4
CHAMP1-202ENST00000463003 CELSR1Q9NYQ6 3014 aa0.09□□□□□ -2.4
CHAMP1-202ENST00000463003 NESP48681 1621 aa0.09□□□□□ -2.4
CHAMP1-202ENST00000463003 RYR3Q15413 4870 aa0.09□□□□□ -2.4
CHAMP1-202ENST00000463003 SPTBN1Q01082 2364 aaKnown RBP0.09□□□□□ -2.4
CHAMP1-202ENST00000463003 ANKHD1Q8IWZ3 2542 aaKnown RBP0.09□□□□□ -2.4
CHAMP1-202ENST00000463003 NSD1Q96L73 2696 aaPredicted RBP0.09□□□□□ -2.4
CHAMP1-202ENST00000463003 CHD8Q9HCK8 2581 aa0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 NCOR1O75376 2440 aa0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 HIVEP3Q5T1R4 2406 aa0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 WNK2Q9Y3S1 2297 aa0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 ITPR1Q14643 2758 aa0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 TEP1Q99973 2627 aaKnown RBP0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 ADAMTS12P58397 1594 aa0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 HFM1A2PYH4 1435 aa0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 ETDCA0A1B0GVM5 59 aa0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 LINC01549A6NIU2 74 aa0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 SPTBN4Q9H254 2564 aa0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 ABCA13Q86UQ4 5058 aa0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 HMCN2Q8NDA2 5059 aa0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 TNRC18O15417 2968 aaPredicted RBP0.08□□□□□ -2.4
CHAMP1-202ENST00000463003 TRANK1O15050 2925 aa0.07□□□□□ -2.4
CHAMP1-202ENST00000463003 TIAM2Q8IVF5 1701 aa0.07□□□□□ -2.4
CHAMP1-202ENST00000463003 TENM2Q9NT68 2774 aa0.07□□□□□ -2.4
CHAMP1-202ENST00000463003 NIPBLQ6KC79 2804 aaeCLIP0.07□□□□□ -2.41e-6■■■■■ 35.4
CHAMP1-202ENST00000463003 MUC12Q9UKN1 5478 aa0.07□□□□□ -2.4
CHAMP1-202ENST00000463003 RGPD8O14715 1765 aaPredicted RBP0.07□□□□□ -2.4
CHAMP1-202ENST00000463003 RGPD5Q99666 1765 aa0.07□□□□□ -2.4
CHAMP1-202ENST00000463003 ITPR3Q14573 2671 aa0.07□□□□□ -2.4
CHAMP1-202ENST00000463003 DEFB131BA0A096LNP1 70 aa0.07□□□□□ -2.4
CHAMP1-202ENST00000463003 MRPL33O75394 65 aaKnown RBP0.07□□□□□ -2.4
CHAMP1-202ENST00000463003 SFTA3P0C7M3 94 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms