RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 KRTDAPP60985 99 aa4.66□□□□□ -1.66
CDC42BPA-210ENST00000462553 LITAFQ99732 161 aa4.66□□□□□ -1.66
CDC42BPA-210ENST00000462553 TTTY13Q9BZ97 58 aa4.66□□□□□ -1.66
CDC42BPA-210ENST00000462553 A0A087X002 238 aa4.65□□□□□ -1.67
CDC42BPA-210ENST00000462553 SPRR1AP35321 89 aa4.65□□□□□ -1.67
CDC42BPA-210ENST00000462553 UBE2AP49459 152 aa4.65□□□□□ -1.67
CDC42BPA-210ENST00000462553 PRLHP81277 87 aa4.65□□□□□ -1.67
CDC42BPA-210ENST00000462553 ADAMTSL4-AS1Q5T5F5 129 aa4.65□□□□□ -1.67
CDC42BPA-210ENST00000462553 HIST3H2BBQ8N257 126 aa4.65□□□□□ -1.67
CDC42BPA-210ENST00000462553 TRBV10-3A0A0K0K1G6 114 aa4.64□□□□□ -1.67
CDC42BPA-210ENST00000462553 A0A0U1RQV1 116 aa4.64□□□□□ -1.67
CDC42BPA-210ENST00000462553 KRTAP4-16G5E9R7 235 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-210ENST00000462553 PRYO14603 147 aa4.64□□□□□ -1.67
CDC42BPA-210ENST00000462553 ANKRD39Q53RE8 183 aa4.64□□□□□ -1.67
CDC42BPA-210ENST00000462553 FAM19A1Q7Z5A9 133 aa4.64□□□□□ -1.67
CDC42BPA-210ENST00000462553 TSPAN13O95857 204 aa4.63□□□□□ -1.67
CDC42BPA-210ENST00000462553 KRTAP13-2Q52LG2 175 aa4.63□□□□□ -1.67
CDC42BPA-210ENST00000462553 ATOH7Q8N100 152 aa4.63□□□□□ -1.67
CDC42BPA-210ENST00000462553 HIST1H2BLQ99880 126 aa4.63□□□□□ -1.67
CDC42BPA-210ENST00000462553 KCNQ1DNQ9H478 68 aa4.63□□□□□ -1.67
CDC42BPA-210ENST00000462553 ANAPC11Q9NYG5 84 aa4.63□□□□□ -1.67
CDC42BPA-210ENST00000462553 TRBV10-2A0A0K0K1G8 114 aa4.62□□□□□ -1.67
CDC42BPA-210ENST00000462553 ZNF815PA8K554 130 aa4.62□□□□□ -1.67
CDC42BPA-210ENST00000462553 TIMM17BO60830 172 aa4.62□□□□□ -1.67
CDC42BPA-210ENST00000462553 NDUFC2O95298 119 aa4.62□□□□□ -1.67
CDC42BPA-210ENST00000462553 NPC2P61916 151 aa4.62□□□□□ -1.67
CDC42BPA-210ENST00000462553 LINC00337Q8N6G1 96 aa4.62□□□□□ -1.67
CDC42BPA-210ENST00000462553 SPANXB1Q9NS25 103 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-210ENST00000462553 IGLV6-57P01721 117 aa4.61□□□□□ -1.67
CDC42BPA-210ENST00000462553 LINC00308Q8TCZ7 52 aa4.61□□□□□ -1.67
CDC42BPA-210ENST00000462553 C20orf202A1L168 122 aa4.6□□□□□ -1.67
CDC42BPA-210ENST00000462553 DDTP30046 118 aa4.6□□□□□ -1.67
CDC42BPA-210ENST00000462553 FAM229BQ4G0N7 80 aa4.6□□□□□ -1.67
CDC42BPA-210ENST00000462553 SMCR5Q8TEV8 140 aa4.6□□□□□ -1.67
CDC42BPA-210ENST00000462553 MIEN1Q9BRT3 115 aa4.6□□□□□ -1.67
CDC42BPA-210ENST00000462553 B5MCH6 92 aa4.59□□□□□ -1.67
CDC42BPA-210ENST00000462553 CRYGAP11844 174 aa4.59□□□□□ -1.67
CDC42BPA-210ENST00000462553 PCP2Q8IVA1 136 aa4.59□□□□□ -1.67
CDC42BPA-210ENST00000462553 TYMSOSQ8TAI1 123 aa4.59□□□□□ -1.67
CDC42BPA-210ENST00000462553 SPRR4Q96PI1 79 aa4.59□□□□□ -1.67
CDC42BPA-210ENST00000462553 RETNLBQ9BQ08 111 aa4.59□□□□□ -1.67
CDC42BPA-210ENST00000462553 HIGD2AQ9BW72 106 aa4.59□□□□□ -1.67
CDC42BPA-210ENST00000462553 SPANXDQ9BXN6 97 aa4.59□□□□□ -1.67
CDC42BPA-210ENST00000462553 SPANXCQ9NY87 97 aa4.59□□□□□ -1.67
CDC42BPA-210ENST00000462553 ETDCA0A1B0GVM5 59 aa4.58□□□□□ -1.68
CDC42BPA-210ENST00000462553 S100A2P29034 98 aa4.58□□□□□ -1.68
CDC42BPA-210ENST00000462553 SNRPEP62304 92 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-210ENST00000462553 C3orf22Q8N5N4 141 aa4.58□□□□□ -1.68
CDC42BPA-210ENST00000462553 Q9BRP9 147 aa4.58□□□□□ -1.68
CDC42BPA-210ENST00000462553 TRAV23DV6A0A075B6W5 121 aa4.57□□□□□ -1.68
CDC42BPA-210ENST00000462553 C5orf52A6NGY3 159 aa4.57□□□□□ -1.68
CDC42BPA-210ENST00000462553 ERC2-IT1O76042 136 aa4.57□□□□□ -1.68
CDC42BPA-210ENST00000462553 S100A6P06703 90 aa4.57□□□□□ -1.68
CDC42BPA-210ENST00000462553 Q6ZRX8 168 aa4.57□□□□□ -1.68
CDC42BPA-210ENST00000462553 AKR1D1P51857 326 aa4.56□□□□□ -1.68
CDC42BPA-210ENST00000462553 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
CDC42BPA-210ENST00000462553 LINC00483Q53H64 154 aa4.56□□□□□ -1.68
CDC42BPA-210ENST00000462553 S100A7L2Q5SY68 101 aa4.56□□□□□ -1.68
CDC42BPA-210ENST00000462553 ZNF73O43830 326 aaPredicted RBP4.55□□□□□ -1.68
CDC42BPA-210ENST00000462553 SCGB1D4Q6XE38 83 aa4.55□□□□□ -1.68
CDC42BPA-210ENST00000462553 LINC00304Q8N9R0 145 aa4.55□□□□□ -1.68
CDC42BPA-210ENST00000462553 PPDPFQ9H3Y8 114 aa4.55□□□□□ -1.68
CDC42BPA-210ENST00000462553 IFITM1P13164 125 aa4.54□□□□□ -1.68
CDC42BPA-210ENST00000462553 ZNF706Q9Y5V0 76 aaPredicted RBP4.54□□□□□ -1.68
CDC42BPA-210ENST00000462553 S100A12P80511 92 aa4.53□□□□□ -1.68
CDC42BPA-210ENST00000462553 Q6ZVH6 145 aa4.53□□□□□ -1.68
CDC42BPA-210ENST00000462553 MUSTN1Q8IVN3 82 aa4.53□□□□□ -1.68
CDC42BPA-210ENST00000462553 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
CDC42BPA-210ENST00000462553 IGLV7-46A0A075B6I9 117 aa4.52□□□□□ -1.69
CDC42BPA-210ENST00000462553 OR13C6PQ8NH95 151 aa4.52□□□□□ -1.69
CDC42BPA-210ENST00000462553 CDIP1Q9H305 208 aa4.52□□□□□ -1.69
CDC42BPA-210ENST00000462553 HSBP1L1C9JCN9 74 aa4.51□□□□□ -1.69
CDC42BPA-210ENST00000462553 SCGB1D1O95968 90 aa4.51□□□□□ -1.69
CDC42BPA-210ENST00000462553 ELOF1P60002 83 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-210ENST00000462553 C6orf99Q4VX62 202 aa4.51□□□□□ -1.69
CDC42BPA-210ENST00000462553 GAGE2AQ6NT46 116 aa4.51□□□□□ -1.69
CDC42BPA-210ENST00000462553 LINC00518Q8N0U6 118 aa4.51□□□□□ -1.69
CDC42BPA-210ENST00000462553 ST20-AS1Q8NBB2 130 aa4.51□□□□□ -1.69
CDC42BPA-210ENST00000462553 COX8AP10176 69 aa4.5□□□□□ -1.69
CDC42BPA-210ENST00000462553 CTAG1AP78358 180 aa4.5□□□□□ -1.69
CDC42BPA-210ENST00000462553 JOSD1Q15040 202 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-210ENST00000462553 Q8NBF4 154 aa4.5□□□□□ -1.69
CDC42BPA-210ENST00000462553 COPS9Q8WXC6 57 aa4.5□□□□□ -1.69
CDC42BPA-210ENST00000462553 CBY1Q9Y3M2 126 aa4.5□□□□□ -1.69
CDC42BPA-210ENST00000462553 MOBPQ13875 183 aa4.49□□□□□ -1.69
CDC42BPA-210ENST00000462553 KRTAP4-1Q9BYQ7 146 aa4.49□□□□□ -1.69
CDC42BPA-210ENST00000462553 SPRR1BP22528 89 aa4.48□□□□□ -1.69
CDC42BPA-210ENST00000462553 COX7BP24311 80 aa4.48□□□□□ -1.69
CDC42BPA-210ENST00000462553 IGLV9-49A0A0B4J1Y8 123 aa4.47□□□□□ -1.69
CDC42BPA-210ENST00000462553 TRAV13-2A0A0B4J235 113 aa4.47□□□□□ -1.69
CDC42BPA-210ENST00000462553 TRBV7-6A0A0J9YX20 115 aa4.47□□□□□ -1.69
CDC42BPA-210ENST00000462553 A4D1N5 150 aa4.47□□□□□ -1.69
CDC42BPA-210ENST00000462553 A6NDN8 102 aa4.47□□□□□ -1.69
CDC42BPA-210ENST00000462553 DLEU1O43261 78 aa4.47□□□□□ -1.69
CDC42BPA-210ENST00000462553 HINT1P49773 126 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-210ENST00000462553 KRTAP13-3Q3SY46 172 aa4.47□□□□□ -1.69
CDC42BPA-210ENST00000462553 SMIM11BQ8TCY0 68 aa4.47□□□□□ -1.69
CDC42BPA-210ENST00000462553 DHRS4-AS1Q9P1J3 65 aa4.47□□□□□ -1.69
CDC42BPA-210ENST00000462553 PAM16Q9Y3D7 125 aa4.47□□□□□ -1.69
CDC42BPA-210ENST00000462553 A0A1B0GWB2 263 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms