RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 UBE2AP49459 152 aa7.17□□□□□ -1.26
CPNE1-221ENST00000462352 FAM19A1Q7Z5A9 133 aa7.17□□□□□ -1.26
CPNE1-221ENST00000462352 OR13C6PQ8NH95 151 aa7.17□□□□□ -1.26
CPNE1-221ENST00000462352 RPL28P46779 137 aaKnown RBP7.16□□□□□ -1.26
CPNE1-221ENST00000462352 PRLHP81277 87 aa7.16□□□□□ -1.26
CPNE1-221ENST00000462352 KRTAP13-1Q8IUC0 172 aa7.16□□□□□ -1.26
CPNE1-221ENST00000462352 DIRC1Q969H9 104 aa7.16□□□□□ -1.26
CPNE1-221ENST00000462352 C12orf57Q99622 126 aa7.16□□□□□ -1.26
CPNE1-221ENST00000462352 LRP1Q07954 4544 aaKnown RBP7.15□□□□□ -1.26
CPNE1-221ENST00000462352 TRAV23DV6A0A075B6W5 121 aa7.15□□□□□ -1.26
CPNE1-221ENST00000462352 A4D1N5 150 aa7.15□□□□□ -1.26
CPNE1-221ENST00000462352 H0Y9J4 135 aa7.15□□□□□ -1.26
CPNE1-221ENST00000462352 FAT3Q8TDW7 4589 aa7.15□□□□□ -1.27
CPNE1-221ENST00000462352 KRTAP4-16G5E9R7 235 aaPredicted RBP7.14□□□□□ -1.27
CPNE1-221ENST00000462352 PRO1933Q9H354 126 aa7.14□□□□□ -1.27
CPNE1-221ENST00000462352 UQCR10Q9UDW1 63 aa7.14□□□□□ -1.27
CPNE1-221ENST00000462352 ETDCA0A1B0GVM5 59 aa7.13□□□□□ -1.27
CPNE1-221ENST00000462352 A6NDN8 102 aa7.13□□□□□ -1.27
CPNE1-221ENST00000462352 ZNF73O43830 326 aaPredicted RBP7.13□□□□□ -1.27
CPNE1-221ENST00000462352 TAL2Q16559 108 aa7.13□□□□□ -1.27
CPNE1-221ENST00000462352 CBY1Q9Y3M2 126 aa7.13□□□□□ -1.27
CPNE1-221ENST00000462352 TRAV13-2A0A0B4J235 113 aa7.12□□□□□ -1.27
CPNE1-221ENST00000462352 KRTAP29-1A8MX34 341 aaPredicted RBP7.11□□□□□ -1.27
CPNE1-221ENST00000462352 B5MCH6 92 aa7.11□□□□□ -1.27
CPNE1-221ENST00000462352 OXTP01178 125 aa7.11□□□□□ -1.27
CPNE1-221ENST00000462352 HIGD2AQ9BW72 106 aa7.11□□□□□ -1.27
CPNE1-221ENST00000462352 CEND1Q8N111 149 aa7.1□□□□□ -1.27
CPNE1-221ENST00000462352 HINT1P49773 126 aaPredicted RBP7.09□□□□□ -1.27
CPNE1-221ENST00000462352 HSD52Q0P140 79 aa7.09□□□□□ -1.27
CPNE1-221ENST00000462352 Q6ZRX8 168 aa7.09□□□□□ -1.27
CPNE1-221ENST00000462352 A6NJY4 79 aa7.08□□□□□ -1.28
CPNE1-221ENST00000462352 TSTD3H0UI37 97 aa7.08□□□□□ -1.28
CPNE1-221ENST00000462352 KRTAP1-4P0C5Y4 121 aa7.08□□□□□ -1.28
CPNE1-221ENST00000462352 CFC1BP0CG36 223 aa7.08□□□□□ -1.28
CPNE1-221ENST00000462352 CFC1P0CG37 223 aa7.08□□□□□ -1.28
CPNE1-221ENST00000462352 C6orf99Q4VX62 202 aa7.08□□□□□ -1.28
CPNE1-221ENST00000462352 SMCR5Q8TEV8 140 aa7.08□□□□□ -1.28
CPNE1-221ENST00000462352 LINC01600Q96MT4 127 aa7.08□□□□□ -1.28
CPNE1-221ENST00000462352 FXYD2P54710 66 aa7.07□□□□□ -1.28
CPNE1-221ENST00000462352 SMIM11BQ8TCY0 68 aa7.07□□□□□ -1.28
CPNE1-221ENST00000462352 Q9BRP9 147 aa7.07□□□□□ -1.28
CPNE1-221ENST00000462352 TMEM238LA0A1B0GVL6 79 aa7.06□□□□□ -1.28
CPNE1-221ENST00000462352 RPL13AP40429 203 aaKnown RBP7.06□□□□□ -1.28
CPNE1-221ENST00000462352 RAB37Q96AX2 223 aa7.06□□□□□ -1.28
CPNE1-221ENST00000462352 A0A0B4J2C4 111 aa7.05□□□□□ -1.28
CPNE1-221ENST00000462352 TRBV7-6A0A0J9YX20 115 aa7.05□□□□□ -1.28
CPNE1-221ENST00000462352 COX7BP24311 80 aa7.05□□□□□ -1.28
CPNE1-221ENST00000462352 ELOF1P60002 83 aaKnown RBP7.05□□□□□ -1.28
CPNE1-221ENST00000462352 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
CPNE1-221ENST00000462352 ERC2-IT1O76042 136 aa7.04□□□□□ -1.28
CPNE1-221ENST00000462352 MT1HL1P0DM35 61 aa7.04□□□□□ -1.28
CPNE1-221ENST00000462352 A0A1B0GWB2 263 aa7.03□□□□□ -1.28
CPNE1-221ENST00000462352 PRR26Q8N8Z3 221 aa7.03□□□□□ -1.28
CPNE1-221ENST00000462352 SPRR4Q96PI1 79 aa7.03□□□□□ -1.28
CPNE1-221ENST00000462352 ANAPC11Q9NYG5 84 aa7.03□□□□□ -1.28
CPNE1-221ENST00000462352 ZNF706Q9Y5V0 76 aaPredicted RBP7.03□□□□□ -1.28
CPNE1-221ENST00000462352 TNXBP22105 4242 aa7.03□□□□□ -1.28
CPNE1-221ENST00000462352 H7C2G1 150 aa7.02□□□□□ -1.29
CPNE1-221ENST00000462352 KRTAP10-8P60410 259 aa7.02□□□□□ -1.29
CPNE1-221ENST00000462352 CTAG1AP78358 180 aa7.02□□□□□ -1.29
CPNE1-221ENST00000462352 NHP2Q9NX24 153 aaKnown RBP7.02□□□□□ -1.29
CPNE1-221ENST00000462352 DHRS4-AS1Q9P1J3 65 aa7.02□□□□□ -1.29
CPNE1-221ENST00000462352 A0A087X002 238 aa7.01□□□□□ -1.29
CPNE1-221ENST00000462352 PRO1854Q9UHT4 67 aa7.01□□□□□ -1.29
CPNE1-221ENST00000462352 CRYGAP11844 174 aa7□□□□□ -1.29
CPNE1-221ENST00000462352 VAMP3Q15836 100 aa7□□□□□ -1.29
CPNE1-221ENST00000462352 FAM229BQ4G0N7 80 aa7□□□□□ -1.29
CPNE1-221ENST00000462352 BVES-AS1Q5T3Y7 98 aa7□□□□□ -1.29
CPNE1-221ENST00000462352 K7ERJ3 54 aa6.99□□□□□ -1.29
CPNE1-221ENST00000462352 ST20-AS1Q8NBB2 130 aa6.99□□□□□ -1.29
CPNE1-221ENST00000462352 Q1RN00 199 aa6.98□□□□□ -1.29
CPNE1-221ENST00000462352 GAGE2AQ6NT46 116 aa6.98□□□□□ -1.29
CPNE1-221ENST00000462352 M0R143 59 aa6.97□□□□□ -1.29
CPNE1-221ENST00000462352 KRTAP13-2Q52LG2 175 aa6.97□□□□□ -1.29
CPNE1-221ENST00000462352 LINC00483Q53H64 154 aa6.97□□□□□ -1.29
CPNE1-221ENST00000462352 SLC25A20O43772 301 aa6.96□□□□□ -1.3
CPNE1-221ENST00000462352 LINC00575Q6W349 94 aa6.96□□□□□ -1.3
CPNE1-221ENST00000462352 HERC1Q15751 4861 aa6.95□□□□□ -1.3
CPNE1-221ENST00000462352 TYMSOSQ8TAI1 123 aa6.95□□□□□ -1.3
CPNE1-221ENST00000462352 hADV29S1A0JD25 119 aa6.94□□□□□ -1.3
CPNE1-221ENST00000462352 C3orf22Q8N5N4 141 aa6.94□□□□□ -1.3
CPNE1-221ENST00000462352 H0YGX0 51 aa6.93□□□□□ -1.3
CPNE1-221ENST00000462352 TRIAP1O43715 76 aa6.93□□□□□ -1.3
CPNE1-221ENST00000462352 TSPAN13O95857 204 aa6.93□□□□□ -1.3
CPNE1-221ENST00000462352 SPRR1BP22528 89 aa6.93□□□□□ -1.3
CPNE1-221ENST00000462352 PCP4L1A6NKN8 68 aa6.92□□□□□ -1.3
CPNE1-221ENST00000462352 LINC01547P58512 204 aaPredicted RBP6.92□□□□□ -1.3
CPNE1-221ENST00000462352 BATFQ16520 125 aa6.92□□□□□ -1.3
CPNE1-221ENST00000462352 DEFB105AQ8NG35 78 aa6.92□□□□□ -1.3
CPNE1-221ENST00000462352 IGLV5-48A0A075B6I7 105 aa6.91□□□□□ -1.3
CPNE1-221ENST00000462352 IGLV9-49A0A0B4J1Y8 123 aa6.91□□□□□ -1.3
CPNE1-221ENST00000462352 TEX49A0A1B0GTD5 131 aa6.91□□□□□ -1.3
CPNE1-221ENST00000462352 PSMB2P49721 201 aa6.91□□□□□ -1.3
CPNE1-221ENST00000462352 Q6ZQY7 126 aa6.91□□□□□ -1.3
CPNE1-221ENST00000462352 FAM218AQ96MZ4 157 aa6.91□□□□□ -1.3
CPNE1-221ENST00000462352 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.89□□□□□ -1.31
CPNE1-221ENST00000462352 SNCGO76070 127 aa6.88□□□□□ -1.31
CPNE1-221ENST00000462352 COX6CP09669 75 aa6.88□□□□□ -1.31
CPNE1-221ENST00000462352 MOBPQ13875 183 aa6.88□□□□□ -1.31
CPNE1-221ENST00000462352 Q8N377 158 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms