RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 KRTAP13-2Q52LG2 175 aa9.35□□□□□ -0.91
ERCC3-206ENST00000462306 SMCR5Q8TEV8 140 aa9.34□□□□□ -0.91
ERCC3-206ENST00000462306 TRAV23DV6A0A075B6W5 121 aa9.33□□□□□ -0.92
ERCC3-206ENST00000462306 HSBP1L1C9JCN9 74 aa9.32□□□□□ -0.92
ERCC3-206ENST00000462306 SCGB1D1O95968 90 aa9.32□□□□□ -0.92
ERCC3-206ENST00000462306 IFITM1P13164 125 aa9.32□□□□□ -0.92
ERCC3-206ENST00000462306 Q6ZVH6 145 aa9.32□□□□□ -0.92
ERCC3-206ENST00000462306 TYMSOSQ8TAI1 123 aa9.32□□□□□ -0.92
ERCC3-206ENST00000462306 SPRR4Q96PI1 79 aa9.32□□□□□ -0.92
ERCC3-206ENST00000462306 PPDPFQ9H3Y8 114 aa9.32□□□□□ -0.92
ERCC3-206ENST00000462306 ZNF73O43830 326 aaPredicted RBP9.31□□□□□ -0.92
ERCC3-206ENST00000462306 Q6ZRX8 168 aa9.31□□□□□ -0.92
ERCC3-206ENST00000462306 LINC00518Q8N0U6 118 aa9.3□□□□□ -0.92
ERCC3-206ENST00000462306 OR13C6PQ8NH95 151 aa9.3□□□□□ -0.92
ERCC3-206ENST00000462306 Q9BRP9 147 aa9.3□□□□□ -0.92
ERCC3-206ENST00000462306 ERC2-IT1O76042 136 aa9.29□□□□□ -0.92
ERCC3-206ENST00000462306 MUSTN1Q8IVN3 82 aa9.29□□□□□ -0.92
ERCC3-206ENST00000462306 COPS9Q8WXC6 57 aa9.29□□□□□ -0.92
ERCC3-206ENST00000462306 ZNF706Q9Y5V0 76 aaPredicted RBP9.29□□□□□ -0.92
ERCC3-206ENST00000462306 CBY1Q9Y3M2 126 aa9.28□□□□□ -0.92
ERCC3-206ENST00000462306 C3orf22Q8N5N4 141 aa9.26□□□□□ -0.93
ERCC3-206ENST00000462306 JOSD1Q15040 202 aaPredicted RBP9.25□□□□□ -0.93
ERCC3-206ENST00000462306 LINC00483Q53H64 154 aa9.25□□□□□ -0.93
ERCC3-206ENST00000462306 UBR4Q5T4S7 5183 aa9.23□□□□□ -0.93
ERCC3-206ENST00000462306 TSPAN13O95857 204 aa9.23□□□□□ -0.93
ERCC3-206ENST00000462306 COX8AP10176 69 aa9.23□□□□□ -0.93
ERCC3-206ENST00000462306 HINT1P49773 126 aaPredicted RBP9.23□□□□□ -0.93
ERCC3-206ENST00000462306 GAGE2AQ6NT46 116 aa9.22□□□□□ -0.93
ERCC3-206ENST00000462306 LINC00304Q8N9R0 145 aa9.22□□□□□ -0.93
ERCC3-206ENST00000462306 A6NDN8 102 aa9.21□□□□□ -0.94
ERCC3-206ENST00000462306 C6orf99Q4VX62 202 aa9.21□□□□□ -0.94
ERCC3-206ENST00000462306 DLEU1O43261 78 aa9.2□□□□□ -0.94
ERCC3-206ENST00000462306 ELOF1P60002 83 aaKnown RBP9.2□□□□□ -0.94
ERCC3-206ENST00000462306 COX7BP24311 80 aa9.19□□□□□ -0.94
ERCC3-206ENST00000462306 PAM16Q9Y3D7 125 aa9.19□□□□□ -0.94
ERCC3-206ENST00000462306 LRP2P98164 4655 aa9.19□□□□□ -0.94
ERCC3-206ENST00000462306 TRAV13-2A0A0B4J235 113 aa9.18□□□□□ -0.94
ERCC3-206ENST00000462306 SPATA45Q537H7 98 aa9.18□□□□□ -0.94
ERCC3-206ENST00000462306 ST20-AS1Q8NBB2 130 aa9.18□□□□□ -0.94
ERCC3-206ENST00000462306 C14orf144Q96I85 54 aa9.18□□□□□ -0.94
ERCC3-206ENST00000462306 DHRS4-AS1Q9P1J3 65 aa9.18□□□□□ -0.94
ERCC3-206ENST00000462306 TRBV7-6A0A0J9YX20 115 aa9.17□□□□□ -0.94
ERCC3-206ENST00000462306 A4D1N5 150 aa9.17□□□□□ -0.94
ERCC3-206ENST00000462306 VAMP8Q9BV40 100 aa9.17□□□□□ -0.94
ERCC3-206ENST00000462306 TMA7Q9Y2S6 64 aaKnown RBP9.16□□□□□ -0.94
ERCC3-206ENST00000462306 CTAG1AP78358 180 aa9.15□□□□□ -0.94
ERCC3-206ENST00000462306 SMIM11BQ8TCY0 68 aa9.15□□□□□ -0.94
ERCC3-206ENST00000462306 HIST1H4GQ99525 98 aa9.15□□□□□ -0.94
ERCC3-206ENST00000462306 A0A1B0GWB2 263 aa9.14□□□□□ -0.95
ERCC3-206ENST00000462306 PRR4Q16378 134 aa9.14□□□□□ -0.95
ERCC3-206ENST00000462306 Q8NBF4 154 aa9.14□□□□□ -0.95
ERCC3-206ENST00000462306 IGLV9-49A0A0B4J1Y8 123 aa9.13□□□□□ -0.95
ERCC3-206ENST00000462306 PYY3Q5JQD4 70 aa9.13□□□□□ -0.95
ERCC3-206ENST00000462306 SPAG11AQ6PDA7 123 aa9.13□□□□□ -0.95
ERCC3-206ENST00000462306 HIGD1BQ9P298 99 aa9.13□□□□□ -0.95
ERCC3-206ENST00000462306 SPRR1BP22528 89 aa9.12□□□□□ -0.95
ERCC3-206ENST00000462306 MOBPQ13875 183 aa9.12□□□□□ -0.95
ERCC3-206ENST00000462306 SLC25A34Q6PIV7 304 aa9.12□□□□□ -0.95
ERCC3-206ENST00000462306 LPAP08519 4548 aa9.11□□□□□ -0.95
ERCC3-206ENST00000462306 C2orf91Q6ZV80 131 aa9.11□□□□□ -0.95
ERCC3-206ENST00000462306 SSBP3-AS1Q7Z2R9 100 aa9.11□□□□□ -0.95
ERCC3-206ENST00000462306 C12orf57Q99622 126 aa9.09□□□□□ -0.95
ERCC3-206ENST00000462306 RETNLBQ9BQ08 111 aa9.09□□□□□ -0.95
ERCC3-206ENST00000462306 C4orf48Q5BLP8 95 aa9.08□□□□□ -0.96
ERCC3-206ENST00000462306 SPINK1P00995 79 aa9.06□□□□□ -0.96
ERCC3-206ENST00000462306 CFC1BP0CG36 223 aa9.05□□□□□ -0.96
ERCC3-206ENST00000462306 CFC1P0CG37 223 aa9.05□□□□□ -0.96
ERCC3-206ENST00000462306 LINC01547P58512 204 aaPredicted RBP9.05□□□□□ -0.96
ERCC3-206ENST00000462306 TAL2Q16559 108 aa9.05□□□□□ -0.96
ERCC3-206ENST00000462306 C9orf153Q5TBE3 101 aa9.05□□□□□ -0.96
ERCC3-206ENST00000462306 DEFB105AQ8NG35 78 aa9.05□□□□□ -0.96
ERCC3-206ENST00000462306 IGLV5-48A0A075B6I7 105 aa9.04□□□□□ -0.96
ERCC3-206ENST00000462306 TEX49A0A1B0GTD5 131 aa9.04□□□□□ -0.96
ERCC3-206ENST00000462306 VAMP3Q15836 100 aa9.04□□□□□ -0.96
ERCC3-206ENST00000462306 NHP2Q9NX24 153 aaKnown RBP9.04□□□□□ -0.96
ERCC3-206ENST00000462306 LAMTOR3Q9UHA4 124 aa9.04□□□□□ -0.96
ERCC3-206ENST00000462306 LINC00575Q6W349 94 aa9.03□□□□□ -0.96
ERCC3-206ENST00000462306 SMIM29Q86T20 159 aa9.02□□□□□ -0.97
ERCC3-206ENST00000462306 A0A0B4J2C4 111 aa9.01□□□□□ -0.97
ERCC3-206ENST00000462306 RPS29P62273 56 aaKnown RBP9.01□□□□□ -0.97
ERCC3-206ENST00000462306 Q1RN00 199 aa9.01□□□□□ -0.97
ERCC3-206ENST00000462306 CEND1Q8N111 149 aa9.01□□□□□ -0.97
ERCC3-206ENST00000462306 SLC25A20O43772 301 aa9□□□□□ -0.97
ERCC3-206ENST00000462306 IGLV7-46A0A075B6I9 117 aa8.99□□□□□ -0.97
ERCC3-206ENST00000462306 Q8N377 158 aa8.99□□□□□ -0.97
ERCC3-206ENST00000462306 RAB37Q96AX2 223 aa8.99□□□□□ -0.97
ERCC3-206ENST00000462306 hADV29S1A0JD25 119 aa8.98□□□□□ -0.97
ERCC3-206ENST00000462306 H7C2G1 150 aa8.98□□□□□ -0.97
ERCC3-206ENST00000462306 FXYD2P54710 66 aa8.98□□□□□ -0.97
ERCC3-206ENST00000462306 BVES-AS1Q5T3Y7 98 aa8.98□□□□□ -0.97
ERCC3-206ENST00000462306 RNF213Q63HN8 5207 aa8.98□□□□□ -0.97
ERCC3-206ENST00000462306 Q6ZQY7 126 aa8.96□□□□□ -0.98
ERCC3-206ENST00000462306 FP248Q71RG6 208 aaPredicted RBP8.96□□□□□ -0.98
ERCC3-206ENST00000462306 TMEM238LA0A1B0GVL6 79 aa8.95□□□□□ -0.98
ERCC3-206ENST00000462306 A6NJY4 79 aa8.95□□□□□ -0.98
ERCC3-206ENST00000462306 TPRXLQ17RH7 258 aa8.95□□□□□ -0.98
ERCC3-206ENST00000462306 HSD52Q0P140 79 aa8.94□□□□□ -0.98
ERCC3-206ENST00000462306 PRO1933Q9H354 126 aa8.94□□□□□ -0.98
ERCC3-206ENST00000462306 UQCR10Q9UDW1 63 aa8.94□□□□□ -0.98
ERCC3-206ENST00000462306 PRO1854Q9UHT4 67 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 293.1 ms