RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 S100A6P06703 90 aa3.47□□□□□ -1.85
VPS36-202ENST00000462289 SMIM13P0DJ93 91 aa3.47□□□□□ -1.85
VPS36-202ENST00000462289 PFN2P35080 140 aa3.47□□□□□ -1.85
VPS36-202ENST00000462289 SPINK6Q6UWN8 80 aa3.47□□□□□ -1.85
VPS36-202ENST00000462289 LINC00167Q96N53 147 aa3.47□□□□□ -1.85
VPS36-202ENST00000462289 H0Y9J4 135 aa3.46□□□□□ -1.86
VPS36-202ENST00000462289 KRTAP1-4P0C5Y4 121 aa3.46□□□□□ -1.86
VPS36-202ENST00000462289 LGALS3P17931 250 aaKnown RBP3.46□□□□□ -1.86
VPS36-202ENST00000462289 S100A2P29034 98 aa3.46□□□□□ -1.86
VPS36-202ENST00000462289 RPL24P83731 157 aaKnown RBP3.46□□□□□ -1.86
VPS36-202ENST00000462289 JOSD1Q15040 202 aaPredicted RBP3.46□□□□□ -1.86
VPS36-202ENST00000462289 LBHQ53QV2 105 aaPredicted RBP3.46□□□□□ -1.86
VPS36-202ENST00000462289 MEIG1Q5JSS6 88 aa3.46□□□□□ -1.86
VPS36-202ENST00000462289 SPANXDQ9BXN6 97 aa3.46□□□□□ -1.86
VPS36-202ENST00000462289 TTTY13Q9BZ97 58 aa3.46□□□□□ -1.86
VPS36-202ENST00000462289 KCNQ1DNQ9H478 68 aa3.46□□□□□ -1.86
VPS36-202ENST00000462289 SPANXCQ9NY87 97 aa3.46□□□□□ -1.86
VPS36-202ENST00000462289 M0R378 163 aa3.45□□□□□ -1.86
VPS36-202ENST00000462289 DLEU1O43261 78 aa3.45□□□□□ -1.86
VPS36-202ENST00000462289 BCE1O60756 84 aa3.45□□□□□ -1.86
VPS36-202ENST00000462289 IGLV6-57P01721 117 aa3.45□□□□□ -1.86
VPS36-202ENST00000462289 LINC00158P58513 81 aa3.45□□□□□ -1.86
VPS36-202ENST00000462289 KRTAP10-8P60410 259 aa3.45□□□□□ -1.86
VPS36-202ENST00000462289 Q6ZVH6 145 aa3.45□□□□□ -1.86
VPS36-202ENST00000462289 PCP2Q8IVA1 136 aa3.45□□□□□ -1.86
VPS36-202ENST00000462289 DPH3Q96FX2 82 aa3.45□□□□□ -1.86
VPS36-202ENST00000462289 LINC01600Q96MT4 127 aa3.45□□□□□ -1.86
VPS36-202ENST00000462289 IGKV2-28A0A075B6P5 120 aa3.44□□□□□ -1.86
VPS36-202ENST00000462289 ZNF815PA8K554 130 aa3.44□□□□□ -1.86
VPS36-202ENST00000462289 ZNF861PO60384 105 aa3.44□□□□□ -1.86
VPS36-202ENST00000462289 IGKV2D-28P01615 120 aa3.44□□□□□ -1.86
VPS36-202ENST00000462289 BOD1L2Q8IYS8 172 aa3.44□□□□□ -1.86
VPS36-202ENST00000462289 ATOH7Q8N100 152 aa3.44□□□□□ -1.86
VPS36-202ENST00000462289 LINC00308Q8TCZ7 52 aa3.44□□□□□ -1.86
VPS36-202ENST00000462289 SPANXB1Q9NS25 103 aaPredicted RBP3.44□□□□□ -1.86
VPS36-202ENST00000462289 IFITM1P13164 125 aa3.43□□□□□ -1.86
VPS36-202ENST00000462289 PYY3Q5JQD4 70 aa3.43□□□□□ -1.86
VPS36-202ENST00000462289 C1orf137Q5JT78 98 aa3.43□□□□□ -1.86
VPS36-202ENST00000462289 LINC00337Q8N6G1 96 aa3.43□□□□□ -1.86
VPS36-202ENST00000462289 DAND5Q8N907 189 aa3.43□□□□□ -1.86
VPS36-202ENST00000462289 NKAPP1Q8N9T2 125 aa3.43□□□□□ -1.86
VPS36-202ENST00000462289 TMEM126AQ9H061 195 aa3.43□□□□□ -1.86
VPS36-202ENST00000462289 TRBV10-3A0A0K0K1G6 114 aa3.42□□□□□ -1.86
VPS36-202ENST00000462289 A0A0U1RRA0 63 aa3.42□□□□□ -1.86
VPS36-202ENST00000462289 COX8AP10176 69 aa3.42□□□□□ -1.86
VPS36-202ENST00000462289 SVIPQ8NHG7 77 aa3.42□□□□□ -1.86
VPS36-202ENST00000462289 DIRC1Q969H9 104 aa3.42□□□□□ -1.86
VPS36-202ENST00000462289 RPL37AP8A6NKH3 93 aa3.41□□□□□ -1.86
VPS36-202ENST00000462289 TMEM238C9JI98 176 aa3.41□□□□□ -1.86
VPS36-202ENST00000462289 UBE2BP63146 152 aa3.41□□□□□ -1.86
VPS36-202ENST00000462289 REG3GQ6UW15 175 aa3.41□□□□□ -1.86
VPS36-202ENST00000462289 HIGD1BQ9P298 99 aa3.41□□□□□ -1.86
VPS36-202ENST00000462289 GAGE10A6NGK3 116 aa3.4□□□□□ -1.87
VPS36-202ENST00000462289 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
VPS36-202ENST00000462289 RPL28P46779 137 aaKnown RBP3.4□□□□□ -1.87
VPS36-202ENST00000462289 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
VPS36-202ENST00000462289 C2orf91Q6ZV80 131 aa3.4□□□□□ -1.87
VPS36-202ENST00000462289 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
VPS36-202ENST00000462289 HSBP1L1C9JCN9 74 aa3.39□□□□□ -1.87
VPS36-202ENST00000462289 SCGB1D1O95968 90 aa3.39□□□□□ -1.87
VPS36-202ENST00000462289 DDTP30046 118 aa3.39□□□□□ -1.87
VPS36-202ENST00000462289 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
VPS36-202ENST00000462289 FAM229BQ4G0N7 80 aa3.39□□□□□ -1.87
VPS36-202ENST00000462289 LINC00483Q53H64 154 aa3.39□□□□□ -1.87
VPS36-202ENST00000462289 Q6ZRX8 168 aa3.39□□□□□ -1.87
VPS36-202ENST00000462289 LINC00518Q8N0U6 118 aa3.39□□□□□ -1.87
VPS36-202ENST00000462289 SMCR5Q8TEV8 140 aa3.39□□□□□ -1.87
VPS36-202ENST00000462289 COPS9Q8WXC6 57 aa3.39□□□□□ -1.87
VPS36-202ENST00000462289 Q9BRP9 147 aa3.39□□□□□ -1.87
VPS36-202ENST00000462289 TRBV7-6A0A0J9YX20 115 aa3.38□□□□□ -1.87
VPS36-202ENST00000462289 NCR3O14931 201 aa3.38□□□□□ -1.87
VPS36-202ENST00000462289 CTAG1AP78358 180 aa3.38□□□□□ -1.87
VPS36-202ENST00000462289 SCGB1D4Q6XE38 83 aa3.38□□□□□ -1.87
VPS36-202ENST00000462289 MUSTN1Q8IVN3 82 aa3.38□□□□□ -1.87
VPS36-202ENST00000462289 MIEN1Q9BRT3 115 aa3.38□□□□□ -1.87
VPS36-202ENST00000462289 TRAV23DV6A0A075B6W5 121 aa3.37□□□□□ -1.87
VPS36-202ENST00000462289 A0A087X002 238 aa3.37□□□□□ -1.87
VPS36-202ENST00000462289 ZNF73O43830 326 aaPredicted RBP3.37□□□□□ -1.87
VPS36-202ENST00000462289 PRLHP81277 87 aa3.37□□□□□ -1.87
VPS36-202ENST00000462289 KRTAP13-2Q52LG2 175 aa3.37□□□□□ -1.87
VPS36-202ENST00000462289 SPATA45Q537H7 98 aa3.37□□□□□ -1.87
VPS36-202ENST00000462289 VAMP8Q9BV40 100 aa3.37□□□□□ -1.87
VPS36-202ENST00000462289 CBY1Q9Y3M2 126 aa3.37□□□□□ -1.87
VPS36-202ENST00000462289 ERC2-IT1O76042 136 aa3.36□□□□□ -1.87
VPS36-202ENST00000462289 SPRR1BP22528 89 aa3.36□□□□□ -1.87
VPS36-202ENST00000462289 ELOF1P60002 83 aaKnown RBP3.36□□□□□ -1.87
VPS36-202ENST00000462289 NPC2P61916 151 aa3.36□□□□□ -1.87
VPS36-202ENST00000462289 TAL2Q16559 108 aa3.36□□□□□ -1.87
VPS36-202ENST00000462289 SLC25A34Q6PIV7 304 aa3.36□□□□□ -1.87
VPS36-202ENST00000462289 FAM19A1Q7Z5A9 133 aa3.36□□□□□ -1.87
VPS36-202ENST00000462289 SPRR4Q96PI1 79 aa3.36□□□□□ -1.87
VPS36-202ENST00000462289 PAM16Q9Y3D7 125 aa3.36□□□□□ -1.87
VPS36-202ENST00000462289 TRAV13-2A0A0B4J235 113 aa3.35□□□□□ -1.87
VPS36-202ENST00000462289 A4D1N5 150 aa3.35□□□□□ -1.87
VPS36-202ENST00000462289 RPL13AP40429 203 aaKnown RBP3.35□□□□□ -1.87
VPS36-202ENST00000462289 UBE2AP49459 152 aa3.35□□□□□ -1.87
VPS36-202ENST00000462289 SMIM29Q86T20 159 aa3.35□□□□□ -1.87
VPS36-202ENST00000462289 C14orf144Q96I85 54 aa3.35□□□□□ -1.87
VPS36-202ENST00000462289 LRP2P98164 4655 aa3.35□□□□□ -1.87
VPS36-202ENST00000462289 A0A0B4J2C4 111 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms