RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 DDTP30046 118 aa6.87□□□□□ -1.31
SSBP1-202ENST00000461433 REG3GQ6UW15 175 aa6.87□□□□□ -1.31
SSBP1-202ENST00000461433 LINC00337Q8N6G1 96 aa6.87□□□□□ -1.31
SSBP1-202ENST00000461433 KRTAP13-1Q8IUC0 172 aa6.87□□□□□ -1.31
SSBP1-202ENST00000461433 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
SSBP1-202ENST00000461433 PRYO14603 147 aa6.86□□□□□ -1.31
SSBP1-202ENST00000461433 SPRR1AP35321 89 aa6.86□□□□□ -1.31
SSBP1-202ENST00000461433 SPINK6Q6UWN8 80 aa6.86□□□□□ -1.31
SSBP1-202ENST00000461433 HIST1H4GQ99525 98 aa6.86□□□□□ -1.31
SSBP1-202ENST00000461433 A4D1N5 150 aa6.85□□□□□ -1.31
SSBP1-202ENST00000461433 S100A7L2Q5SY68 101 aa6.85□□□□□ -1.31
SSBP1-202ENST00000461433 ZNF861PO60384 105 aa6.84□□□□□ -1.31
SSBP1-202ENST00000461433 UQCR10Q9UDW1 63 aa6.84□□□□□ -1.31
SSBP1-202ENST00000461433 TAL2Q16559 108 aa6.83□□□□□ -1.32
SSBP1-202ENST00000461433 FAM19A1Q7Z5A9 133 aa6.83□□□□□ -1.32
SSBP1-202ENST00000461433 OR13C6PQ8NH95 151 aa6.83□□□□□ -1.32
SSBP1-202ENST00000461433 PRO1933Q9H354 126 aa6.83□□□□□ -1.32
SSBP1-202ENST00000461433 FLG2Q5D862 2391 aaPredicted RBP6.82□□□□□ -1.32
SSBP1-202ENST00000461433 TRAV23DV6A0A075B6W5 121 aa6.82□□□□□ -1.32
SSBP1-202ENST00000461433 PRLHP81277 87 aa6.82□□□□□ -1.32
SSBP1-202ENST00000461433 H0Y9J4 135 aa6.81□□□□□ -1.32
SSBP1-202ENST00000461433 RPL28P46779 137 aaKnown RBP6.81□□□□□ -1.32
SSBP1-202ENST00000461433 UBE2AP49459 152 aa6.81□□□□□ -1.32
SSBP1-202ENST00000461433 CEND1Q8N111 149 aa6.81□□□□□ -1.32
SSBP1-202ENST00000461433 B5MCH6 92 aa6.81□□□□□ -1.32
SSBP1-202ENST00000461433 ZNF73O43830 326 aaPredicted RBP6.81□□□□□ -1.32
SSBP1-202ENST00000461433 DIRC1Q969H9 104 aa6.81□□□□□ -1.32
SSBP1-202ENST00000461433 MYCBP2O75592 4640 aa6.8□□□□□ -1.32
SSBP1-202ENST00000461433 TRAV13-2A0A0B4J235 113 aa6.8□□□□□ -1.32
SSBP1-202ENST00000461433 A6NDN8 102 aa6.8□□□□□ -1.32
SSBP1-202ENST00000461433 CFC1BP0CG36 223 aa6.79□□□□□ -1.32
SSBP1-202ENST00000461433 CFC1P0CG37 223 aa6.79□□□□□ -1.32
SSBP1-202ENST00000461433 HSD52Q0P140 79 aa6.79□□□□□ -1.32
SSBP1-202ENST00000461433 LCE3BQ5TA77 95 aa6.79□□□□□ -1.32
SSBP1-202ENST00000461433 ETDCA0A1B0GVM5 59 aa6.78□□□□□ -1.32
SSBP1-202ENST00000461433 FXYD2P54710 66 aa6.78□□□□□ -1.32
SSBP1-202ENST00000461433 CBY1Q9Y3M2 126 aa6.78□□□□□ -1.32
SSBP1-202ENST00000461433 LRP1Q07954 4544 aaKnown RBP6.78□□□□□ -1.32
SSBP1-202ENST00000461433 A0A1B0GV90 55 aa6.77□□□□□ -1.32
SSBP1-202ENST00000461433 KRTAP1-4P0C5Y4 121 aa6.77□□□□□ -1.32
SSBP1-202ENST00000461433 Q6ZRX8 168 aa6.77□□□□□ -1.32
SSBP1-202ENST00000461433 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
SSBP1-202ENST00000461433 C6orf99Q4VX62 202 aa6.77□□□□□ -1.33
SSBP1-202ENST00000461433 SMIM11BQ8TCY0 68 aa6.77□□□□□ -1.33
SSBP1-202ENST00000461433 SMCR5Q8TEV8 140 aa6.77□□□□□ -1.33
SSBP1-202ENST00000461433 Q9BRP9 147 aa6.77□□□□□ -1.33
SSBP1-202ENST00000461433 FAT3Q8TDW7 4589 aa6.76□□□□□ -1.33
SSBP1-202ENST00000461433 A0A0B4J2C4 111 aa6.76□□□□□ -1.33
SSBP1-202ENST00000461433 HIGD2AQ9BW72 106 aa6.76□□□□□ -1.33
SSBP1-202ENST00000461433 OXTP01178 125 aa6.75□□□□□ -1.33
SSBP1-202ENST00000461433 RPL13AP40429 203 aaKnown RBP6.75□□□□□ -1.33
SSBP1-202ENST00000461433 LINC01600Q96MT4 127 aa6.75□□□□□ -1.33
SSBP1-202ENST00000461433 ERC2-IT1O76042 136 aa6.74□□□□□ -1.33
SSBP1-202ENST00000461433 ELOF1P60002 83 aaKnown RBP6.74□□□□□ -1.33
SSBP1-202ENST00000461433 TRBV7-6A0A0J9YX20 115 aa6.74□□□□□ -1.33
SSBP1-202ENST00000461433 TMEM238LA0A1B0GVL6 79 aa6.74□□□□□ -1.33
SSBP1-202ENST00000461433 A6NJY4 79 aa6.74□□□□□ -1.33
SSBP1-202ENST00000461433 M0R143 59 aa6.74□□□□□ -1.33
SSBP1-202ENST00000461433 MT1HL1P0DM35 61 aa6.74□□□□□ -1.33
SSBP1-202ENST00000461433 COX7BP24311 80 aa6.73□□□□□ -1.33
SSBP1-202ENST00000461433 HINT1P49773 126 aaPredicted RBP6.73□□□□□ -1.33
SSBP1-202ENST00000461433 BVES-AS1Q5T3Y7 98 aa6.73□□□□□ -1.33
SSBP1-202ENST00000461433 RAB37Q96AX2 223 aa6.73□□□□□ -1.33
SSBP1-202ENST00000461433 A0A1B0GWB2 263 aa6.72□□□□□ -1.33
SSBP1-202ENST00000461433 KRTAP10-8P60410 259 aa6.71□□□□□ -1.33
SSBP1-202ENST00000461433 NHP2Q9NX24 153 aaKnown RBP6.71□□□□□ -1.33
SSBP1-202ENST00000461433 ANAPC11Q9NYG5 84 aa6.71□□□□□ -1.33
SSBP1-202ENST00000461433 PRO1854Q9UHT4 67 aa6.71□□□□□ -1.33
SSBP1-202ENST00000461433 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
SSBP1-202ENST00000461433 H7C2G1 150 aa6.71□□□□□ -1.34
SSBP1-202ENST00000461433 SPRR4Q96PI1 79 aa6.71□□□□□ -1.34
SSBP1-202ENST00000461433 K7ERJ3 54 aa6.7□□□□□ -1.34
SSBP1-202ENST00000461433 PRR26Q8N8Z3 221 aa6.7□□□□□ -1.34
SSBP1-202ENST00000461433 KRTAP9-9Q9BYP9 154 aa6.7□□□□□ -1.34
SSBP1-202ENST00000461433 KRTAP9-4Q9BYQ2 154 aa6.7□□□□□ -1.34
SSBP1-202ENST00000461433 A0A087X002 238 aa6.69□□□□□ -1.34
SSBP1-202ENST00000461433 SMCPP49901 116 aaPredicted RBP6.69□□□□□ -1.34
SSBP1-202ENST00000461433 DHRS4-AS1Q9P1J3 65 aa6.69□□□□□ -1.34
SSBP1-202ENST00000461433 ST20-AS1Q8NBB2 130 aa6.68□□□□□ -1.34
SSBP1-202ENST00000461433 TNXBP22105 4242 aa6.68□□□□□ -1.34
SSBP1-202ENST00000461433 J3QL48 77 aa6.68□□□□□ -1.34
SSBP1-202ENST00000461433 VAMP3Q15836 100 aa6.67□□□□□ -1.34
SSBP1-202ENST00000461433 FAM229BQ4G0N7 80 aa6.67□□□□□ -1.34
SSBP1-202ENST00000461433 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
SSBP1-202ENST00000461433 LINC00483Q53H64 154 aa6.67□□□□□ -1.34
SSBP1-202ENST00000461433 LINC00575Q6W349 94 aa6.67□□□□□ -1.34
SSBP1-202ENST00000461433 SNHG12Q9BXW3 62 aa6.67□□□□□ -1.34
SSBP1-202ENST00000461433 ZNF706Q9Y5V0 76 aaPredicted RBP6.67□□□□□ -1.34
SSBP1-202ENST00000461433 CRYGAP11844 174 aa6.65□□□□□ -1.34
SSBP1-202ENST00000461433 GAGE2AQ6NT46 116 aa6.65□□□□□ -1.34
SSBP1-202ENST00000461433 TSPAN13O95857 204 aa6.65□□□□□ -1.35
SSBP1-202ENST00000461433 Q1RN00 199 aa6.65□□□□□ -1.35
SSBP1-202ENST00000461433 TRIAP1O43715 76 aa6.64□□□□□ -1.35
SSBP1-202ENST00000461433 SPRR1BP22528 89 aa6.63□□□□□ -1.35
SSBP1-202ENST00000461433 LINC01547P58512 204 aaPredicted RBP6.63□□□□□ -1.35
SSBP1-202ENST00000461433 FAM218AQ96MZ4 157 aa6.63□□□□□ -1.35
SSBP1-202ENST00000461433 hADV29S1A0JD25 119 aa6.62□□□□□ -1.35
SSBP1-202ENST00000461433 H0YGX0 51 aa6.62□□□□□ -1.35
SSBP1-202ENST00000461433 COL5A1-AS1Q5SY13 56 aa6.62□□□□□ -1.35
SSBP1-202ENST00000461433 C3orf22Q8N5N4 141 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms