RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 LRCOL1A6NCL2 159 aa4.37□□□□□ -1.71
MSH2-204ENST00000461394 C16orf90A8MZG2 172 aa4.37□□□□□ -1.71
MSH2-204ENST00000461394 INAFM2P0DMQ5 153 aa4.37□□□□□ -1.71
MSH2-204ENST00000461394 ELOF1P60002 83 aaKnown RBP4.37□□□□□ -1.71
MSH2-204ENST00000461394 UBE2BP63146 152 aa4.37□□□□□ -1.71
MSH2-204ENST00000461394 MRPL55Q7Z7F7 128 aaKnown RBP4.37□□□□□ -1.71
MSH2-204ENST00000461394 LINC01600Q96MT4 127 aa4.37□□□□□ -1.71
MSH2-204ENST00000461394 LINC00167Q96N53 147 aa4.37□□□□□ -1.71
MSH2-204ENST00000461394 LAMTOR3Q9UHA4 124 aa4.37□□□□□ -1.71
MSH2-204ENST00000461394 DNAH9Q9NYC9 4486 aa4.37□□□□□ -1.71
MSH2-204ENST00000461394 A0A087WTM6 91 aa4.36□□□□□ -1.71
MSH2-204ENST00000461394 C3orf84H3BNL1 204 aa4.36□□□□□ -1.71
MSH2-204ENST00000461394 TMEM256-PLSCR3K7ERE1 68 aa4.36□□□□□ -1.71
MSH2-204ENST00000461394 CHTF8P0CG12 524 aa4.36□□□□□ -1.71
MSH2-204ENST00000461394 Q6ZQY7 126 aa4.36□□□□□ -1.71
MSH2-204ENST00000461394 Q6ZRN7 208 aaPredicted RBP4.36□□□□□ -1.71
MSH2-204ENST00000461394 LINC00476Q8WZB0 136 aa4.36□□□□□ -1.71
MSH2-204ENST00000461394 IGLV1-50A0A075B6I6 118 aa4.35□□□□□ -1.71
MSH2-204ENST00000461394 H3BQ85 93 aa4.35□□□□□ -1.71
MSH2-204ENST00000461394 REG3GQ6UW15 175 aa4.35□□□□□ -1.71
MSH2-204ENST00000461394 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.35□□□□□ -1.71
MSH2-204ENST00000461394 Q6ZR54 194 aa4.35□□□□□ -1.71
MSH2-204ENST00000461394 C9orf163Q8N9P6 203 aa4.35□□□□□ -1.71
MSH2-204ENST00000461394 KCNQ1DNQ9H478 68 aa4.35□□□□□ -1.71
MSH2-204ENST00000461394 C14orf132Q9NPU4 83 aa4.35□□□□□ -1.71
MSH2-204ENST00000461394 IGLV5-52A0A0A0MRZ9 124 aa4.34□□□□□ -1.71
MSH2-204ENST00000461394 JMJD7-PLA2G4BH0Y9G9 81 aa4.34□□□□□ -1.71
MSH2-204ENST00000461394 RTL8CO15255 209 aa4.34□□□□□ -1.71
MSH2-204ENST00000461394 LINC00474Q9P2X8 69 aa4.34□□□□□ -1.71
MSH2-204ENST00000461394 A0A1W2PNN7 141 aa4.33□□□□□ -1.72
MSH2-204ENST00000461394 FUSP35637 526 aaKnown RBP eCLIP4.33□□□□□ -1.72
MSH2-204ENST00000461394 PHF5AQ7RTV0 110 aaKnown RBP4.33□□□□□ -1.72
MSH2-204ENST00000461394 FAM19A1Q7Z5A9 133 aa4.33□□□□□ -1.72
MSH2-204ENST00000461394 DEFB105AQ8NG35 78 aa4.33□□□□□ -1.72
MSH2-204ENST00000461394 SIGMAR1Q99720 223 aa4.33□□□□□ -1.72
MSH2-204ENST00000461394 DHRS4-AS1Q9P1J3 65 aa4.33□□□□□ -1.72
MSH2-204ENST00000461394 ACYP1P07311 99 aa4.32□□□□□ -1.72
MSH2-204ENST00000461394 KRTAP7-1Q8IUC3 87 aa4.32□□□□□ -1.72
MSH2-204ENST00000461394 RBM3P98179 157 aaKnown RBP4.31□□□□□ -1.72
MSH2-204ENST00000461394 SDIM1Q6ZPB5 146 aa4.31□□□□□ -1.72
MSH2-204ENST00000461394 Q6ZRX8 168 aa4.31□□□□□ -1.72
MSH2-204ENST00000461394 STAB2Q8WWQ8 2551 aa4.3□□□□□ -1.72
MSH2-204ENST00000461394 UBE2AP49459 152 aa4.3□□□□□ -1.72
MSH2-204ENST00000461394 DSCR8Q96T75 97 aa4.3□□□□□ -1.72
MSH2-204ENST00000461394 FAM240AA0A1B0GVK7 77 aa4.29□□□□□ -1.72
MSH2-204ENST00000461394 SPRR1AP35321 89 aa4.29□□□□□ -1.72
MSH2-204ENST00000461394 NDUFV3P56181 108 aaKnown RBP4.29□□□□□ -1.72
MSH2-204ENST00000461394 SEC61BP60468 96 aaKnown RBP4.29□□□□□ -1.72
MSH2-204ENST00000461394 PRLHP81277 87 aa4.29□□□□□ -1.72
MSH2-204ENST00000461394 SPACA4Q8TDM5 124 aa4.29□□□□□ -1.72
MSH2-204ENST00000461394 OBSCN-AS1Q96MR7 158 aa4.29□□□□□ -1.72
MSH2-204ENST00000461394 HIGD2AQ9BW72 106 aa4.29□□□□□ -1.72
MSH2-204ENST00000461394 DYNC2H1Q8NCM8 4307 aaKnown RBP4.28□□□□□ -1.72
MSH2-204ENST00000461394 MEGF8Q7Z7M0 2845 aa4.28□□□□□ -1.72
MSH2-204ENST00000461394 MT-ATP8P03928 68 aa4.28□□□□□ -1.72
MSH2-204ENST00000461394 CCKP06307 115 aa4.28□□□□□ -1.72
MSH2-204ENST00000461394 XGP55808 180 aa4.28□□□□□ -1.72
MSH2-204ENST00000461394 ST20-AS1Q8NBB2 130 aa4.28□□□□□ -1.72
MSH2-204ENST00000461394 Q9BRP9 147 aa4.28□□□□□ -1.72
MSH2-204ENST00000461394 F8WEM9 126 aa4.27□□□□□ -1.73
MSH2-204ENST00000461394 KRTAP4-16G5E9R7 235 aaPredicted RBP4.27□□□□□ -1.73
MSH2-204ENST00000461394 PANO1I0J062 215 aa4.27□□□□□ -1.73
MSH2-204ENST00000461394 Q75L30 129 aa4.27□□□□□ -1.73
MSH2-204ENST00000461394 SMCR5Q8TEV8 140 aa4.27□□□□□ -1.73
MSH2-204ENST00000461394 ERC2-IT1O76042 136 aa4.26□□□□□ -1.73
MSH2-204ENST00000461394 PDE6GP18545 87 aa4.26□□□□□ -1.73
MSH2-204ENST00000461394 LOC110117498A0A087WWA1 95 aa4.25□□□□□ -1.73
MSH2-204ENST00000461394 EPM2AB3EWF7 344 aa4.25□□□□□ -1.73
MSH2-204ENST00000461394 BCE1O60756 84 aa4.25□□□□□ -1.73
MSH2-204ENST00000461394 Q6ZQT0 140 aa4.25□□□□□ -1.73
MSH2-204ENST00000461394 Q8N377 158 aa4.25□□□□□ -1.73
MSH2-204ENST00000461394 C3orf22Q8N5N4 141 aa4.25□□□□□ -1.73
MSH2-204ENST00000461394 DNAH1Q9P2D7 4330 aa4.25□□□□□ -1.73
MSH2-204ENST00000461394 LINC00643Q86TS7 51 aa4.24□□□□□ -1.73
MSH2-204ENST00000461394 KRTAP11-1Q8IUC1 163 aa4.24□□□□□ -1.73
MSH2-204ENST00000461394 UBL5Q9BZL1 73 aa4.24□□□□□ -1.73
MSH2-204ENST00000461394 PRKDCP78527 4128 aaKnown RBP4.24□□□□□ -1.73
MSH2-204ENST00000461394 TENM2Q9NT68 2774 aa4.23□□□□□ -1.73
MSH2-204ENST00000461394 CSMD3Q7Z407 3707 aa4.23□□□□□ -1.73
MSH2-204ENST00000461394 SCGB1A1P11684 91 aa4.23□□□□□ -1.73
MSH2-204ENST00000461394 KRTAP10-2P60368 255 aa4.23□□□□□ -1.73
MSH2-204ENST00000461394 C1orf137Q5JT78 98 aa4.23□□□□□ -1.73
MSH2-204ENST00000461394 LINC00846Q9NV44 126 aa4.23□□□□□ -1.73
MSH2-204ENST00000461394 PLAC8Q9NZF1 115 aa4.23□□□□□ -1.73
MSH2-204ENST00000461394 STARD9Q9P2P6 4700 aa4.23□□□□□ -1.73
MSH2-204ENST00000461394 DNAH7Q8WXX0 4024 aa4.23□□□□□ -1.73
MSH2-204ENST00000461394 IGLV5-48A0A075B6I7 105 aa4.22□□□□□ -1.73
MSH2-204ENST00000461394 IGKV3D-7A0A0C4DH55 119 aa4.22□□□□□ -1.73
MSH2-204ENST00000461394 TRBV7-4A0A0J9YYF1 115 aa4.22□□□□□ -1.73
MSH2-204ENST00000461394 H0Y9J4 135 aa4.22□□□□□ -1.73
MSH2-204ENST00000461394 LINC01547P58512 204 aaPredicted RBP4.22□□□□□ -1.73
MSH2-204ENST00000461394 DNHD1Q96M86 4753 aa4.22□□□□□ -1.73
MSH2-204ENST00000461394 PLECQ15149 4684 aaKnown RBP4.22□□□□□ -1.73
MSH2-204ENST00000461394 LCE6AA0A183 80 aa4.21□□□□□ -1.74
MSH2-204ENST00000461394 Q6JHZ5 121 aa4.21□□□□□ -1.74
MSH2-204ENST00000461394 PSORS1C2Q9UIG4 136 aa4.21□□□□□ -1.74
MSH2-204ENST00000461394 LYSTQ99698 3801 aa4.21□□□□□ -1.74
MSH2-204ENST00000461394 HAMPP81172 84 aa4.2□□□□□ -1.74
MSH2-204ENST00000461394 ZNF706Q9Y5V0 76 aaPredicted RBP4.2□□□□□ -1.74
MSH2-204ENST00000461394 VPS13DQ5THJ4 4388 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms