RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 IMUPQ9GZP8 106 aa12.99□□□□□ -0.33
CCM2-203ENST00000461377 LOC110117498A0A087WWA1 95 aa12.98□□□□□ -0.33
CCM2-203ENST00000461377 LYSTQ99698 3801 aa12.97□□□□□ -0.33
CCM2-203ENST00000461377 Q6ZQT0 140 aa12.97□□□□□ -0.33
CCM2-203ENST00000461377 NBDYA0A0U1RRE5 68 aa12.96□□□□□ -0.33
CCM2-203ENST00000461377 RPL37AP8A6NKH3 93 aa12.96□□□□□ -0.33
CCM2-203ENST00000461377 C14orf177Q52M58 125 aa12.96□□□□□ -0.33
CCM2-203ENST00000461377 FAM19A5Q7Z5A7 132 aaPredicted RBP12.96□□□□□ -0.33
CCM2-203ENST00000461377 SPRR1AP35321 89 aa12.96□□□□□ -0.34
CCM2-203ENST00000461377 PLECQ15149 4684 aaKnown RBP12.96□□□□□ -0.34
CCM2-203ENST00000461377 MRPL55Q7Z7F7 128 aaKnown RBP12.96□□□□□ -0.34
CCM2-203ENST00000461377 DNAH10Q8IVF4 4471 aa12.95□□□□□ -0.34
CCM2-203ENST00000461377 KRTAP4-16G5E9R7 235 aaPredicted RBP12.95□□□□□ -0.34
CCM2-203ENST00000461377 CSMD3Q7Z407 3707 aa12.95□□□□□ -0.34
CCM2-203ENST00000461377 NDUFV3P56181 108 aaKnown RBP12.94□□□□□ -0.34
CCM2-203ENST00000461377 C16orf90A8MZG2 172 aa12.93□□□□□ -0.34
CCM2-203ENST00000461377 A0A096LNI7 61 aa12.92□□□□□ -0.34
CCM2-203ENST00000461377 Q6JHZ5 121 aa12.92□□□□□ -0.34
CCM2-203ENST00000461377 B5MCH6 92 aa12.92□□□□□ -0.34
CCM2-203ENST00000461377 Q6ZRX8 168 aa12.92□□□□□ -0.34
CCM2-203ENST00000461377 DSCR8Q96T75 97 aa12.92□□□□□ -0.34
CCM2-203ENST00000461377 ANAPC13Q9BS18 74 aa12.91□□□□□ -0.34
CCM2-203ENST00000461377 PDE6GP18545 87 aa12.9□□□□□ -0.34
CCM2-203ENST00000461377 LRCOL1A6NCL2 159 aa12.9□□□□□ -0.34
CCM2-203ENST00000461377 DHRS4-AS1Q9P1J3 65 aa12.9□□□□□ -0.34
CCM2-203ENST00000461377 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.89□□□□□ -0.35
CCM2-203ENST00000461377 ETDCA0A1B0GVM5 59 aa12.89□□□□□ -0.35
CCM2-203ENST00000461377 Q6ZRN7 208 aaPredicted RBP12.89□□□□□ -0.35
CCM2-203ENST00000461377 DNAH7Q8WXX0 4024 aa12.88□□□□□ -0.35
CCM2-203ENST00000461377 PRKDCP78527 4128 aaKnown RBP12.88□□□□□ -0.35
CCM2-203ENST00000461377 TRBV7-4A0A0J9YYF1 115 aa12.88□□□□□ -0.35
CCM2-203ENST00000461377 Q9BRP9 147 aa12.87□□□□□ -0.35
CCM2-203ENST00000461377 IGKV2-24A0A0C4DH68 120 aa12.87□□□□□ -0.35
CCM2-203ENST00000461377 M0R2N4 97 aa12.86□□□□□ -0.35
CCM2-203ENST00000461377 A0A1W2PNN7 141 aa12.85□□□□□ -0.35
CCM2-203ENST00000461377 IGKV3D-7A0A0C4DH55 119 aa12.85□□□□□ -0.35
CCM2-203ENST00000461377 VPS13DQ5THJ4 4388 aa12.84□□□□□ -0.35
CCM2-203ENST00000461377 DNHD1Q96M86 4753 aa12.84□□□□□ -0.35
CCM2-203ENST00000461377 MEGF8Q7Z7M0 2845 aa12.83□□□□□ -0.35
CCM2-203ENST00000461377 LINC01547P58512 204 aaPredicted RBP12.83□□□□□ -0.35
CCM2-203ENST00000461377 REG3GQ6UW15 175 aa12.83□□□□□ -0.35
CCM2-203ENST00000461377 STARD9Q9P2P6 4700 aa12.83□□□□□ -0.36
CCM2-203ENST00000461377 FAM236AA0A1B0GUQ0 79 aa12.83□□□□□ -0.36
CCM2-203ENST00000461377 FAM236BA0A1B0GV22 79 aa12.83□□□□□ -0.36
CCM2-203ENST00000461377 Q8N377 158 aa12.83□□□□□ -0.36
CCM2-203ENST00000461377 C9orf163Q8N9P6 203 aa12.82□□□□□ -0.36
CCM2-203ENST00000461377 UBL5Q9BZL1 73 aa12.82□□□□□ -0.36
CCM2-203ENST00000461377 ATP5EP2Q5VTU8 51 aa12.81□□□□□ -0.36
CCM2-203ENST00000461377 TENM2Q9NT68 2774 aa12.81□□□□□ -0.36
CCM2-203ENST00000461377 DEFB105AQ8NG35 78 aa12.8□□□□□ -0.36
CCM2-203ENST00000461377 PKIGQ9Y2B9 76 aa12.8□□□□□ -0.36
CCM2-203ENST00000461377 CHTF8P0CG12 524 aa12.78□□□□□ -0.36
CCM2-203ENST00000461377 IGLV5-48A0A075B6I7 105 aa12.78□□□□□ -0.36
CCM2-203ENST00000461377 ERC2-IT1O76042 136 aa12.76□□□□□ -0.37
CCM2-203ENST00000461377 UBE2BP63146 152 aa12.76□□□□□ -0.37
CCM2-203ENST00000461377 HIST1H4AP62805 103 aaKnown RBP12.76□□□□□ -0.37
CCM2-203ENST00000461377 ST20-AS1Q8NBB2 130 aa12.76□□□□□ -0.37
CCM2-203ENST00000461377 Q6ZVQ6 151 aa12.74□□□□□ -0.37
CCM2-203ENST00000461377 PHF5AQ7RTV0 110 aaKnown RBP12.72□□□□□ -0.37
CCM2-203ENST00000461377 Q6ZR54 194 aa12.71□□□□□ -0.37
CCM2-203ENST00000461377 LINC00474Q9P2X8 69 aa12.71□□□□□ -0.37
CCM2-203ENST00000461377 A0A087WVE0 104 aa12.7□□□□□ -0.38
CCM2-203ENST00000461377 TNP2Q05952 138 aa12.7□□□□□ -0.38
CCM2-203ENST00000461377 FAM19A1Q7Z5A9 133 aa12.7□□□□□ -0.38
CCM2-203ENST00000461377 C3orf22Q8N5N4 141 aa12.7□□□□□ -0.38
CCM2-203ENST00000461377 A0A087WTM6 91 aa12.7□□□□□ -0.38
CCM2-203ENST00000461377 KRTAP11-1Q8IUC1 163 aa12.69□□□□□ -0.38
CCM2-203ENST00000461377 CCDC179H3BU77 68 aa12.68□□□□□ -0.38
CCM2-203ENST00000461377 PRLHP81277 87 aa12.68□□□□□ -0.38
CCM2-203ENST00000461377 PANO1I0J062 215 aa12.67□□□□□ -0.38
CCM2-203ENST00000461377 KRTAP21-3Q3LHN1 58 aa12.65□□□□□ -0.38
CCM2-203ENST00000461377 ATOX1O00244 68 aa12.65□□□□□ -0.38
CCM2-203ENST00000461377 HAMPP81172 84 aa12.65□□□□□ -0.38
CCM2-203ENST00000461377 CXCL6P80162 114 aa12.63□□□□□ -0.39
CCM2-203ENST00000461377 SMIM29Q86T20 159 aa12.63□□□□□ -0.39
CCM2-203ENST00000461377 H0Y9J4 135 aa12.62□□□□□ -0.39
CCM2-203ENST00000461377 SPACA4Q8TDM5 124 aa12.62□□□□□ -0.39
CCM2-203ENST00000461377 C1orf137Q5JT78 98 aa12.61□□□□□ -0.39
CCM2-203ENST00000461377 EPM2AB3EWF7 344 aa12.61□□□□□ -0.39
CCM2-203ENST00000461377 HIGD2AQ9BW72 106 aa12.61□□□□□ -0.39
CCM2-203ENST00000461377 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.6□□□□□ -0.39
CCM2-203ENST00000461377 A0A1W2PNM2 257 aa12.6□□□□□ -0.39
CCM2-203ENST00000461377 A0A1B0GW54 56 aa12.58□□□□□ -0.4
CCM2-203ENST00000461377 RTL8CO15255 209 aa12.58□□□□□ -0.4
CCM2-203ENST00000461377 FUSP35637 526 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCM2-203ENST00000461377 C3orf84H3BNL1 204 aa12.56□□□□□ -0.4
CCM2-203ENST00000461377 Q8NBF4 154 aa12.56□□□□□ -0.4
CCM2-203ENST00000461377 DPH3Q96FX2 82 aa12.56□□□□□ -0.4
CCM2-203ENST00000461377 FBN3Q75N90 2809 aa12.56□□□□□ -0.4
CCM2-203ENST00000461377 C1orf134Q5TEV5 83 aa12.56□□□□□ -0.4
CCM2-203ENST00000461377 DNAH2Q9P225 4427 aa12.55□□□□□ -0.4
CCM2-203ENST00000461377 NREPQ16612 68 aa12.55□□□□□ -0.4
CCM2-203ENST00000461377 F8WEM9 126 aa12.54□□□□□ -0.4
CCM2-203ENST00000461377 DNAH17Q9UFH2 4485 aa12.54□□□□□ -0.4
CCM2-203ENST00000461377 BCE1O60756 84 aa12.54□□□□□ -0.4
CCM2-203ENST00000461377 LINC00476Q8WZB0 136 aa12.54□□□□□ -0.4
CCM2-203ENST00000461377 SPRR4Q96PI1 79 aa12.54□□□□□ -0.4
CCM2-203ENST00000461377 UQCRQO14949 82 aa12.53□□□□□ -0.4
CCM2-203ENST00000461377 LY6G6CO95867 125 aa12.53□□□□□ -0.4
CCM2-203ENST00000461377 COX7CP15954 63 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms