RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ANKRD39Q53RE8 183 aa13.13□□□□□ -0.31
TRAF4-207ENST00000461195 LINC00304Q8N9R0 145 aa13.13□□□□□ -0.31
TRAF4-207ENST00000461195 PRR4Q16378 134 aa13.12□□□□□ -0.31
TRAF4-207ENST00000461195 HIST3H2BBQ8N257 126 aa13.12□□□□□ -0.31
TRAF4-207ENST00000461195 S100A2P29034 98 aa13.11□□□□□ -0.31
TRAF4-207ENST00000461195 Q6ZRX8 168 aa13.11□□□□□ -0.31
TRAF4-207ENST00000461195 C3orf22Q8N5N4 141 aa13.11□□□□□ -0.31
TRAF4-207ENST00000461195 CBY1Q9Y3M2 126 aa13.11□□□□□ -0.31
TRAF4-207ENST00000461195 SCGB1D4Q6XE38 83 aa13.1□□□□□ -0.31
TRAF4-207ENST00000461195 HIST1H2BLQ99880 126 aa13.1□□□□□ -0.31
TRAF4-207ENST00000461195 ZNF73O43830 326 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-207ENST00000461195 Q9BRP9 147 aa13.08□□□□□ -0.32
TRAF4-207ENST00000461195 S100A6P06703 90 aa13.07□□□□□ -0.32
TRAF4-207ENST00000461195 SNRPEP62304 92 aaKnown RBP13.07□□□□□ -0.32
TRAF4-207ENST00000461195 OR13C6PQ8NH95 151 aa13.07□□□□□ -0.32
TRAF4-207ENST00000461195 SPANXDQ9BXN6 97 aa13.07□□□□□ -0.32
TRAF4-207ENST00000461195 PPDPFQ9H3Y8 114 aa13.07□□□□□ -0.32
TRAF4-207ENST00000461195 LPAP08519 4548 aa13.06□□□□□ -0.32
TRAF4-207ENST00000461195 ERC2-IT1O76042 136 aa13.06□□□□□ -0.32
TRAF4-207ENST00000461195 JOSD1Q15040 202 aaPredicted RBP13.06□□□□□ -0.32
TRAF4-207ENST00000461195 LINC00483Q53H64 154 aa13.05□□□□□ -0.32
TRAF4-207ENST00000461195 HINT1P49773 126 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-207ENST00000461195 CTAG1AP78358 180 aa13.04□□□□□ -0.32
TRAF4-207ENST00000461195 GAGE2AQ6NT46 116 aa13.04□□□□□ -0.32
TRAF4-207ENST00000461195 PCP2Q8IVA1 136 aa13.04□□□□□ -0.32
TRAF4-207ENST00000461195 LINC00518Q8N0U6 118 aa13.04□□□□□ -0.32
TRAF4-207ENST00000461195 COPS9Q8WXC6 57 aa13.04□□□□□ -0.32
TRAF4-207ENST00000461195 IFITM1P13164 125 aa13.01□□□□□ -0.33
TRAF4-207ENST00000461195 Q6ZVH6 145 aa13.01□□□□□ -0.33
TRAF4-207ENST00000461195 SPAG11AQ6PDA7 123 aa13□□□□□ -0.33
TRAF4-207ENST00000461195 HSBP1L1C9JCN9 74 aa12.97□□□□□ -0.33
TRAF4-207ENST00000461195 C4orf48Q5BLP8 95 aa12.97□□□□□ -0.33
TRAF4-207ENST00000461195 Q8NBF4 154 aa12.97□□□□□ -0.33
TRAF4-207ENST00000461195 RETNLBQ9BQ08 111 aa12.96□□□□□ -0.33
TRAF4-207ENST00000461195 MUSTN1Q8IVN3 82 aa12.95□□□□□ -0.34
TRAF4-207ENST00000461195 IGLV9-49A0A0B4J1Y8 123 aa12.94□□□□□ -0.34
TRAF4-207ENST00000461195 C5orf52A6NGY3 159 aa12.94□□□□□ -0.34
TRAF4-207ENST00000461195 DHRS4-AS1Q9P1J3 65 aa12.93□□□□□ -0.34
TRAF4-207ENST00000461195 MOBPQ13875 183 aa12.92□□□□□ -0.34
TRAF4-207ENST00000461195 C6orf99Q4VX62 202 aa12.92□□□□□ -0.34
TRAF4-207ENST00000461195 ST20-AS1Q8NBB2 130 aa12.92□□□□□ -0.34
TRAF4-207ENST00000461195 COX7BP24311 80 aa12.91□□□□□ -0.34
TRAF4-207ENST00000461195 A6NDN8 102 aa12.9□□□□□ -0.34
TRAF4-207ENST00000461195 SCGB1D1O95968 90 aa12.9□□□□□ -0.34
TRAF4-207ENST00000461195 ELOF1P60002 83 aaKnown RBP12.9□□□□□ -0.34
TRAF4-207ENST00000461195 SSBP3-AS1Q7Z2R9 100 aa12.9□□□□□ -0.34
TRAF4-207ENST00000461195 SPINK1P00995 79 aa12.87□□□□□ -0.35
TRAF4-207ENST00000461195 TRBV7-6A0A0J9YX20 115 aa12.86□□□□□ -0.35
TRAF4-207ENST00000461195 TRAV13-2A0A0B4J235 113 aa12.85□□□□□ -0.35
TRAF4-207ENST00000461195 C9orf153Q5TBE3 101 aa12.85□□□□□ -0.35
TRAF4-207ENST00000461195 IGLV7-46A0A075B6I9 117 aa12.84□□□□□ -0.35
TRAF4-207ENST00000461195 A0A1B0GWB2 263 aa12.83□□□□□ -0.36
TRAF4-207ENST00000461195 SPRR1BP22528 89 aa12.83□□□□□ -0.36
TRAF4-207ENST00000461195 SLC25A34Q6PIV7 304 aa12.82□□□□□ -0.36
TRAF4-207ENST00000461195 TPRXLQ17RH7 258 aa12.8□□□□□ -0.36
TRAF4-207ENST00000461195 RPS29P62273 56 aaKnown RBP12.79□□□□□ -0.36
TRAF4-207ENST00000461195 FP248Q71RG6 208 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-207ENST00000461195 SMIM11BQ8TCY0 68 aa12.78□□□□□ -0.36
TRAF4-207ENST00000461195 A4D1N5 150 aa12.77□□□□□ -0.37
TRAF4-207ENST00000461195 COX8AP10176 69 aa12.77□□□□□ -0.37
TRAF4-207ENST00000461195 TAL2Q16559 108 aa12.77□□□□□ -0.37
TRAF4-207ENST00000461195 LAMTOR3Q9UHA4 124 aa12.77□□□□□ -0.37
TRAF4-207ENST00000461195 MUC2Q02817 5179 aa12.77□□□□□ -0.37
TRAF4-207ENST00000461195 DEFB105AQ8NG35 78 aa12.75□□□□□ -0.37
TRAF4-207ENST00000461195 CDIP1Q9H305 208 aa12.74□□□□□ -0.37
TRAF4-207ENST00000461195 TEX49A0A1B0GTD5 131 aa12.73□□□□□ -0.37
TRAF4-207ENST00000461195 DLEU1O43261 78 aa12.73□□□□□ -0.37
TRAF4-207ENST00000461195 Q8N377 158 aa12.73□□□□□ -0.37
TRAF4-207ENST00000461195 HIST1H4GQ99525 98 aa12.73□□□□□ -0.37
TRAF4-207ENST00000461195 NHP2Q9NX24 153 aaKnown RBP12.72□□□□□ -0.37
TRAF4-207ENST00000461195 SLC25A20O43772 301 aa12.71□□□□□ -0.37
TRAF4-207ENST00000461195 VAMP3Q15836 100 aa12.7□□□□□ -0.38
TRAF4-207ENST00000461195 Q1RN00 199 aa12.69□□□□□ -0.38
TRAF4-207ENST00000461195 PAM16Q9Y3D7 125 aa12.69□□□□□ -0.38
TRAF4-207ENST00000461195 IGLV5-48A0A075B6I7 105 aa12.68□□□□□ -0.38
TRAF4-207ENST00000461195 SPATA45Q537H7 98 aa12.68□□□□□ -0.38
TRAF4-207ENST00000461195 C14orf144Q96I85 54 aa12.68□□□□□ -0.38
TRAF4-207ENST00000461195 LINC01547P58512 204 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-207ENST00000461195 VAMP8Q9BV40 100 aa12.67□□□□□ -0.38
TRAF4-207ENST00000461195 C12orf57Q99622 126 aa12.66□□□□□ -0.38
TRAF4-207ENST00000461195 SMIM29Q86T20 159 aa12.65□□□□□ -0.38
TRAF4-207ENST00000461195 KRTAP13-3Q3SY46 172 aa12.63□□□□□ -0.39
TRAF4-207ENST00000461195 HRCT1Q6UXD1 115 aa12.63□□□□□ -0.39
TRAF4-207ENST00000461195 LINC00575Q6W349 94 aa12.63□□□□□ -0.39
TRAF4-207ENST00000461195 PRO1933Q9H354 126 aa12.63□□□□□ -0.39
TRAF4-207ENST00000461195 HIGD1BQ9P298 99 aa12.63□□□□□ -0.39
TRAF4-207ENST00000461195 A0A0U1RQV1 116 aa12.61□□□□□ -0.39
TRAF4-207ENST00000461195 LIMD2Q9BT23 127 aa12.61□□□□□ -0.39
TRAF4-207ENST00000461195 KRTAP9-2Q9BYQ4 174 aa12.61□□□□□ -0.39
TRAF4-207ENST00000461195 CD164Q04900 197 aa12.59□□□□□ -0.39
TRAF4-207ENST00000461195 hADV29S1A0JD25 119 aa12.58□□□□□ -0.4
TRAF4-207ENST00000461195 BVES-AS1Q5T3Y7 98 aa12.57□□□□□ -0.4
TRAF4-207ENST00000461195 C2orf91Q6ZV80 131 aa12.57□□□□□ -0.4
TRAF4-207ENST00000461195 H7C2G1 150 aa12.56□□□□□ -0.4
TRAF4-207ENST00000461195 CFC1BP0CG36 223 aa12.56□□□□□ -0.4
TRAF4-207ENST00000461195 CFC1P0CG37 223 aa12.56□□□□□ -0.4
TRAF4-207ENST00000461195 Q6ZQY7 126 aa12.55□□□□□ -0.4
TRAF4-207ENST00000461195 RAB37Q96AX2 223 aa12.55□□□□□ -0.4
TRAF4-207ENST00000461195 MUC17Q685J3 4493 aa12.52□□□□□ -0.4
TRAF4-207ENST00000461195 A0A0B4J2C4 111 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms