RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 HIST1H2BDP58876 126 aa6.69□□□□□ -1.34
SOX2-OT-201ENST00000460739 NPC2P61916 151 aa6.69□□□□□ -1.34
SOX2-OT-201ENST00000460739 HIST1H2BCP62807 126 aa6.69□□□□□ -1.34
SOX2-OT-201ENST00000460739 HIST2H2BEQ16778 126 aa6.69□□□□□ -1.34
SOX2-OT-201ENST00000460739 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.69□□□□□ -1.34
SOX2-OT-201ENST00000460739 HIST1H2BHQ93079 126 aa6.69□□□□□ -1.34
SOX2-OT-201ENST00000460739 HIST1H2BNQ99877 126 aa6.69□□□□□ -1.34
SOX2-OT-201ENST00000460739 HIST1H2BMQ99879 126 aa6.69□□□□□ -1.34
SOX2-OT-201ENST00000460739 ZNF73O43830 326 aaPredicted RBP6.68□□□□□ -1.34
SOX2-OT-201ENST00000460739 MOBPQ13875 183 aa6.68□□□□□ -1.34
SOX2-OT-201ENST00000460739 JOSD1Q15040 202 aaPredicted RBP6.68□□□□□ -1.34
SOX2-OT-201ENST00000460739 SSBP3-AS1Q7Z2R9 100 aa6.68□□□□□ -1.34
SOX2-OT-201ENST00000460739 IGLV9-49A0A0B4J1Y8 123 aa6.67□□□□□ -1.34
SOX2-OT-201ENST00000460739 RPS29P62273 56 aaKnown RBP6.67□□□□□ -1.34
SOX2-OT-201ENST00000460739 LINC01545Q5VT33 79 aa6.67□□□□□ -1.34
SOX2-OT-201ENST00000460739 LITAFQ99732 161 aa6.67□□□□□ -1.34
SOX2-OT-201ENST00000460739 TIMM17BO60830 172 aa6.66□□□□□ -1.34
SOX2-OT-201ENST00000460739 KRTAP13-3Q3SY46 172 aa6.66□□□□□ -1.34
SOX2-OT-201ENST00000460739 PET117Q6UWS5 81 aa6.66□□□□□ -1.34
SOX2-OT-201ENST00000460739 LINC00308Q8TCZ7 52 aa6.66□□□□□ -1.34
SOX2-OT-201ENST00000460739 CBY1Q9Y3M2 126 aa6.66□□□□□ -1.34
SOX2-OT-201ENST00000460739 C5orf52A6NGY3 159 aa6.65□□□□□ -1.34
SOX2-OT-201ENST00000460739 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.34
SOX2-OT-201ENST00000460739 Q8N377 158 aa6.65□□□□□ -1.34
SOX2-OT-201ENST00000460739 SPANXCQ9NY87 97 aa6.65□□□□□ -1.34
SOX2-OT-201ENST00000460739 FAT4Q6V0I7 4981 aa6.64□□□□□ -1.35
SOX2-OT-201ENST00000460739 HINT1P49773 126 aaPredicted RBP6.63□□□□□ -1.35
SOX2-OT-201ENST00000460739 ZNF815PA8K554 130 aa6.62□□□□□ -1.35
SOX2-OT-201ENST00000460739 C3orf79P0CE67 100 aa6.62□□□□□ -1.35
SOX2-OT-201ENST00000460739 ST20-AS1Q8NBB2 130 aa6.62□□□□□ -1.35
SOX2-OT-201ENST00000460739 SLC25A20O43772 301 aa6.61□□□□□ -1.35
SOX2-OT-201ENST00000460739 COA6Q5JTJ3 125 aaKnown RBP6.61□□□□□ -1.35
SOX2-OT-201ENST00000460739 C9orf153Q5TBE3 101 aa6.61□□□□□ -1.35
SOX2-OT-201ENST00000460739 OR13C6PQ8NH95 151 aa6.61□□□□□ -1.35
SOX2-OT-201ENST00000460739 SPANXDQ9BXN6 97 aa6.61□□□□□ -1.35
SOX2-OT-201ENST00000460739 TTTY13Q9BZ97 58 aa6.61□□□□□ -1.35
SOX2-OT-201ENST00000460739 SPRR1BP22528 89 aa6.6□□□□□ -1.35
SOX2-OT-201ENST00000460739 ASB16-AS1Q495Z4 193 aa6.6□□□□□ -1.35
SOX2-OT-201ENST00000460739 DHRS4-AS1Q9P1J3 65 aa6.6□□□□□ -1.35
SOX2-OT-201ENST00000460739 LINC00518Q8N0U6 118 aa6.59□□□□□ -1.35
SOX2-OT-201ENST00000460739 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
SOX2-OT-201ENST00000460739 KRTAP3-2Q9BYR7 98 aa6.59□□□□□ -1.35
SOX2-OT-201ENST00000460739 KRTDAPP60985 99 aa6.58□□□□□ -1.36
SOX2-OT-201ENST00000460739 ELOF1P60002 83 aaKnown RBP6.57□□□□□ -1.36
SOX2-OT-201ENST00000460739 SLC25A34Q6PIV7 304 aa6.57□□□□□ -1.36
SOX2-OT-201ENST00000460739 COX7BP24311 80 aa6.56□□□□□ -1.36
SOX2-OT-201ENST00000460739 SEC61BP60468 96 aaKnown RBP6.56□□□□□ -1.36
SOX2-OT-201ENST00000460739 C6orf99Q4VX62 202 aa6.56□□□□□ -1.36
SOX2-OT-201ENST00000460739 ANKRD39Q53RE8 183 aa6.55□□□□□ -1.36
SOX2-OT-201ENST00000460739 SCGB1D4Q6XE38 83 aa6.55□□□□□ -1.36
SOX2-OT-201ENST00000460739 COPS9Q8WXC6 57 aa6.55□□□□□ -1.36
SOX2-OT-201ENST00000460739 TRBV7-6A0A0J9YX20 115 aa6.54□□□□□ -1.36
SOX2-OT-201ENST00000460739 C20orf202A1L168 122 aa6.54□□□□□ -1.36
SOX2-OT-201ENST00000460739 IFITM1P13164 125 aa6.54□□□□□ -1.36
SOX2-OT-201ENST00000460739 XP32Q5T750 250 aa6.54□□□□□ -1.36
SOX2-OT-201ENST00000460739 LAMTOR3Q9UHA4 124 aa6.54□□□□□ -1.36
SOX2-OT-201ENST00000460739 Q6ZVH6 145 aa6.53□□□□□ -1.36
SOX2-OT-201ENST00000460739 LIMD2Q9BT23 127 aa6.53□□□□□ -1.36
SOX2-OT-201ENST00000460739 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
SOX2-OT-201ENST00000460739 KRTAP4-1Q9BYQ7 146 aa6.53□□□□□ -1.36
SOX2-OT-201ENST00000460739 AKR1D1P51857 326 aa6.52□□□□□ -1.37
SOX2-OT-201ENST00000460739 ATOH7Q8N100 152 aa6.52□□□□□ -1.37
SOX2-OT-201ENST00000460739 TEX49A0A1B0GTD5 131 aa6.51□□□□□ -1.37
SOX2-OT-201ENST00000460739 A0A1B0GWB2 263 aa6.51□□□□□ -1.37
SOX2-OT-201ENST00000460739 TAL2Q16559 108 aa6.51□□□□□ -1.37
SOX2-OT-201ENST00000460739 PCP2Q8IVA1 136 aa6.51□□□□□ -1.37
SOX2-OT-201ENST00000460739 A6NDN8 102 aa6.5□□□□□ -1.37
SOX2-OT-201ENST00000460739 CD164Q04900 197 aa6.5□□□□□ -1.37
SOX2-OT-201ENST00000460739 Q1RN00 199 aa6.5□□□□□ -1.37
SOX2-OT-201ENST00000460739 HRCT1Q6UXD1 115 aa6.5□□□□□ -1.37
SOX2-OT-201ENST00000460739 MUSTN1Q8IVN3 82 aa6.5□□□□□ -1.37
SOX2-OT-201ENST00000460739 DEFB105AQ8NG35 78 aa6.5□□□□□ -1.37
SOX2-OT-201ENST00000460739 SMIM29Q86T20 159 aa6.49□□□□□ -1.37
SOX2-OT-201ENST00000460739 PRO1933Q9H354 126 aa6.49□□□□□ -1.37
SOX2-OT-201ENST00000460739 IGLV5-48A0A075B6I7 105 aa6.48□□□□□ -1.37
SOX2-OT-201ENST00000460739 LINC01547P58512 204 aaPredicted RBP6.48□□□□□ -1.37
SOX2-OT-201ENST00000460739 SNRPEP62304 92 aaKnown RBP6.48□□□□□ -1.37
SOX2-OT-201ENST00000460739 A4D1N5 150 aa6.47□□□□□ -1.37
SOX2-OT-201ENST00000460739 TRAV13-2A0A0B4J235 113 aa6.46□□□□□ -1.38
SOX2-OT-201ENST00000460739 Q5XG85 94 aa6.46□□□□□ -1.38
SOX2-OT-201ENST00000460739 H7C2G1 150 aa6.45□□□□□ -1.38
SOX2-OT-201ENST00000460739 SMIM11BQ8TCY0 68 aa6.45□□□□□ -1.38
SOX2-OT-201ENST00000460739 NHP2Q9NX24 153 aaKnown RBP6.45□□□□□ -1.38
SOX2-OT-201ENST00000460739 HIST3H2BBQ8N257 126 aa6.44□□□□□ -1.38
SOX2-OT-201ENST00000460739 HIST1H2BLQ99880 126 aa6.44□□□□□ -1.38
SOX2-OT-201ENST00000460739 C9orf92A6NGG3 77 aa6.43□□□□□ -1.38
SOX2-OT-201ENST00000460739 A0A0G2JQZ4 141 aa6.41□□□□□ -1.38
SOX2-OT-201ENST00000460739 S100A2P29034 98 aa6.41□□□□□ -1.38
SOX2-OT-201ENST00000460739 C1orf195Q5TG92 126 aa6.41□□□□□ -1.38
SOX2-OT-201ENST00000460739 VAMP3Q15836 100 aa6.4□□□□□ -1.38
SOX2-OT-201ENST00000460739 PCOTHQ58A44 107 aa6.4□□□□□ -1.38
SOX2-OT-201ENST00000460739 HSBP1L1C9JCN9 74 aa6.39□□□□□ -1.39
SOX2-OT-201ENST00000460739 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
SOX2-OT-201ENST00000460739 LINC00575Q6W349 94 aa6.39□□□□□ -1.39
SOX2-OT-201ENST00000460739 IGLV8-61A0A075B6I0 122 aa6.37□□□□□ -1.39
SOX2-OT-201ENST00000460739 KRTAP19-2Q3LHN2 52 aa6.37□□□□□ -1.39
SOX2-OT-201ENST00000460739 hADV29S1A0JD25 119 aa6.36□□□□□ -1.39
SOX2-OT-201ENST00000460739 F8WEM9 126 aa6.36□□□□□ -1.39
SOX2-OT-201ENST00000460739 S100A6P06703 90 aa6.36□□□□□ -1.39
SOX2-OT-201ENST00000460739 Q6ZQY7 126 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 2010 ms