RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 BDP1A6H8Y1 2624 aa0.32□□□□□ -2.36
VBP1-202ENST00000460509 NDUFA4O00483 81 aa0.32□□□□□ -2.36
VBP1-202ENST00000460509 SPINK4O60575 86 aa0.32□□□□□ -2.36
VBP1-202ENST00000460509 DEFA5Q01523 94 aa0.32□□□□□ -2.36
VBP1-202ENST00000460509 NHSQ6T4R5 1651 aa0.32□□□□□ -2.36
VBP1-202ENST00000460509 MADDQ8WXG6 1647 aa0.31□□□□□ -2.36
VBP1-202ENST00000460509 DDX60LQ5H9U9 1706 aaKnown RBP0.31□□□□□ -2.36
VBP1-202ENST00000460509 NRAPQ86VF7 1730 aa0.31□□□□□ -2.36
VBP1-202ENST00000460509 HEPN1Q6WQI6 88 aa0.31□□□□□ -2.36
VBP1-202ENST00000460509 USF3Q68DE3 2245 aa0.31□□□□□ -2.36
VBP1-202ENST00000460509 AHCTF1Q8WYP5 2266 aa0.31□□□□□ -2.36
VBP1-202ENST00000460509 DIP2AQ14689 1571 aa0.31□□□□□ -2.36
VBP1-202ENST00000460509 CDKN2A-AS1Q9UH64 79 aa0.3□□□□□ -2.36
VBP1-202ENST00000460509 PLXNC1O60486 1568 aa0.3□□□□□ -2.36
VBP1-202ENST00000460509 PIEZO2Q9H5I5 2752 aa0.3□□□□□ -2.36
VBP1-202ENST00000460509 PIEZO1Q92508 2521 aa0.3□□□□□ -2.36
VBP1-202ENST00000460509 EFCAB5A4FU69 1503 aa0.29□□□□□ -2.36
VBP1-202ENST00000460509 INO80Q9ULG1 1556 aaPredicted RBP0.29□□□□□ -2.36
VBP1-202ENST00000460509 C2CD3Q4AC94 2353 aa0.29□□□□□ -2.36
VBP1-202ENST00000460509 TPRP12270 2363 aaKnown RBP0.28□□□□□ -2.36
VBP1-202ENST00000460509 URB1O60287 2271 aaKnown RBP0.28□□□□□ -2.36
VBP1-202ENST00000460509 GPR98Q8WXG9 6306 aa0.28□□□□□ -2.36
VBP1-202ENST00000460509 H3BVH4 76 aa0.28□□□□□ -2.36
VBP1-202ENST00000460509 NDUFA3O95167 84 aa0.28□□□□□ -2.36
VBP1-202ENST00000460509 WFDC13Q8IUB5 93 aa0.28□□□□□ -2.36
VBP1-202ENST00000460509 RALGAPBQ86X10 1494 aa0.28□□□□□ -2.37
VBP1-202ENST00000460509 THOC2Q8NI27 1593 aaKnown RBP0.28□□□□□ -2.37
VBP1-202ENST00000460509 KMT2DO14686 5537 aa0.27□□□□□ -2.37
VBP1-202ENST00000460509 TJP1Q07157 1748 aa0.27□□□□□ -2.37
VBP1-202ENST00000460509 PRM1P04553 51 aa0.27□□□□□ -2.37
VBP1-202ENST00000460509 HILPDAQ9Y5L2 63 aa0.27□□□□□ -2.37
VBP1-202ENST00000460509 HFM1A2PYH4 1435 aa0.27□□□□□ -2.37
VBP1-202ENST00000460509 DEPDC5O75140 1603 aa0.26□□□□□ -2.37
VBP1-202ENST00000460509 SPTBN2O15020 2390 aa0.25□□□□□ -2.37
VBP1-202ENST00000460509 PTPRZ1P23471 2315 aaPredicted RBP0.25□□□□□ -2.37
VBP1-202ENST00000460509 GOLGA4Q13439 2230 aaKnown RBP0.25□□□□□ -2.37
VBP1-202ENST00000460509 CCDC180Q9P1Z9 1646 aa0.25□□□□□ -2.37
VBP1-202ENST00000460509 KCNQ1DNQ9H478 68 aa0.25□□□□□ -2.37
VBP1-202ENST00000460509 CHD9Q3L8U1 2897 aa0.25□□□□□ -2.37
VBP1-202ENST00000460509 ERICH3Q5RHP9 1530 aa0.24□□□□□ -2.37
VBP1-202ENST00000460509 PLCE1Q9P212 2302 aa0.24□□□□□ -2.37
VBP1-202ENST00000460509 PTPRQQ9UMZ3 2332 aa0.24□□□□□ -2.37
VBP1-202ENST00000460509 H0YAA0 97 aa0.24□□□□□ -2.37
VBP1-202ENST00000460509 ENHOQ6UWT2 76 aa0.24□□□□□ -2.37
VBP1-202ENST00000460509 TENM4Q6N022 2769 aa0.24□□□□□ -2.37
VBP1-202ENST00000460509 C3P01024 1663 aa0.24□□□□□ -2.37
VBP1-202ENST00000460509 DEFB131BA0A096LNP1 70 aa0.23□□□□□ -2.37
VBP1-202ENST00000460509 ATXN8Q156A1 80 aa0.23□□□□□ -2.37
VBP1-202ENST00000460509 PRO3102Q9H379 93 aa0.23□□□□□ -2.37
VBP1-202ENST00000460509 TNXBP22105 4242 aa0.22□□□□□ -2.37
VBP1-202ENST00000460509 C3orf79P0CE67 100 aa0.22□□□□□ -2.37
VBP1-202ENST00000460509 SPRR2DP22532 72 aa0.22□□□□□ -2.37
VBP1-202ENST00000460509 UBL5Q9BZL1 73 aa0.22□□□□□ -2.37
VBP1-202ENST00000460509 ZNF292O60281 2723 aa0.22□□□□□ -2.37
VBP1-202ENST00000460509 CSMD3Q7Z407 3707 aa0.22□□□□□ -2.37
VBP1-202ENST00000460509 LINC00158P58513 81 aa0.21□□□□□ -2.38
VBP1-202ENST00000460509 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.21□□□□□ -2.38
VBP1-202ENST00000460509 F8P00451 2351 aa0.2□□□□□ -2.38
VBP1-202ENST00000460509 ABCA6Q8N139 1617 aa0.2□□□□□ -2.38
VBP1-202ENST00000460509 VWFP04275 2813 aa0.2□□□□□ -2.38
VBP1-202ENST00000460509 ABCC6O95255 1503 aa0.2□□□□□ -2.38
VBP1-202ENST00000460509 SMIM31A0A1B0GVY4 71 aa0.2□□□□□ -2.38
VBP1-202ENST00000460509 LOC730098B7Z3J9 87 aa0.2□□□□□ -2.38
VBP1-202ENST00000460509 LYNX1G3V0Z9 82 aa0.2□□□□□ -2.38
VBP1-202ENST00000460509 M0R2T5 61 aa0.2□□□□□ -2.38
VBP1-202ENST00000460509 GLI2P10070 1586 aa0.19□□□□□ -2.38
VBP1-202ENST00000460509 TIAM1Q13009 1591 aa0.19□□□□□ -2.38
VBP1-202ENST00000460509 A0A087WWC5 75 aa0.19□□□□□ -2.38
VBP1-202ENST00000460509 FSIP2Q5CZC0 6907 aa0.19□□□□□ -2.38
VBP1-202ENST00000460509 DOPEY2Q9Y3R5 2298 aa0.18□□□□□ -2.38
VBP1-202ENST00000460509 ANK2Q01484 3957 aa0.18□□□□□ -2.38
VBP1-202ENST00000460509 ZFYVE26Q68DK2 2539 aa0.18□□□□□ -2.38
VBP1-202ENST00000460509 MRPL33O75394 65 aaKnown RBP0.18□□□□□ -2.38
VBP1-202ENST00000460509 GNG13Q9P2W3 67 aa0.18□□□□□ -2.38
VBP1-202ENST00000460509 MACF1Q9UPN3 7388 aaKnown RBP0.18□□□□□ -2.38
VBP1-202ENST00000460509 KIAA0586Q9BVV6 1533 aa0.18□□□□□ -2.38
VBP1-202ENST00000460509 DEFB135Q30KP9 77 aa0.17□□□□□ -2.38
VBP1-202ENST00000460509 DEFB114Q30KQ6 69 aa0.17□□□□□ -2.38
VBP1-202ENST00000460509 WNK2Q9Y3S1 2297 aa0.16□□□□□ -2.38
VBP1-202ENST00000460509 SYNE2Q8WXH0 6885 aaKnown RBP0.16□□□□□ -2.38
VBP1-202ENST00000460509 OTOGQ6ZRI0 2925 aa0.16□□□□□ -2.38
VBP1-202ENST00000460509 PKDREJQ9NTG1 2253 aa0.16□□□□□ -2.38
VBP1-202ENST00000460509 LY75O60449 1722 aa0.16□□□□□ -2.38
VBP1-202ENST00000460509 ITSN2Q9NZM3 1697 aa0.15□□□□□ -2.39
VBP1-202ENST00000460509 SPTBN1Q01082 2364 aaKnown RBP0.15□□□□□ -2.39
VBP1-202ENST00000460509 ETDCA0A1B0GVM5 59 aa0.15□□□□□ -2.39
VBP1-202ENST00000460509 CRIP1P50238 77 aa0.15□□□□□ -2.39
VBP1-202ENST00000460509 HRNRQ86YZ3 2850 aaPredicted RBP0.14□□□□□ -2.39
VBP1-202ENST00000460509 AKAP6Q13023 2319 aa0.14□□□□□ -2.39
VBP1-202ENST00000460509 GVINP1Q7Z2Y8 2422 aa0.14□□□□□ -2.39
VBP1-202ENST00000460509 LINC01549A6NIU2 74 aa0.13□□□□□ -2.39
VBP1-202ENST00000460509 DEFB130BP0DP73 79 aa0.13□□□□□ -2.39
VBP1-202ENST00000460509 DEFB130AP0DP74 79 aa0.13□□□□□ -2.39
VBP1-202ENST00000460509 IAPPP10997 89 aa0.13□□□□□ -2.39
VBP1-202ENST00000460509 SPRR2BP35325 72 aa0.13□□□□□ -2.39
VBP1-202ENST00000460509 DSTQ03001 7570 aaKnown RBP0.13□□□□□ -2.39
VBP1-202ENST00000460509 ABCA10Q8WWZ4 1543 aa0.13□□□□□ -2.39
VBP1-202ENST00000460509 ALS2Q96Q42 1657 aa0.12□□□□□ -2.39
VBP1-202ENST00000460509 CHD6Q8TD26 2715 aa0.12□□□□□ -2.39
VBP1-202ENST00000460509 UNC79Q9P2D8 2635 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms