RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 TRAV13-2A0A0B4J235 113 aa9.6□□□□□ -0.87
SDF4-204ENST00000459994 UBE2BP63146 152 aa9.6□□□□□ -0.87
SDF4-204ENST00000459994 S100A7L2Q5SY68 101 aa9.6□□□□□ -0.87
SDF4-204ENST00000459994 BVES-AS1Q5T3Y7 98 aa9.6□□□□□ -0.87
SDF4-204ENST00000459994 TMEM126AQ9H061 195 aa9.6□□□□□ -0.87
SDF4-204ENST00000459994 TRBV10-3A0A0K0K1G6 114 aa9.59□□□□□ -0.87
SDF4-204ENST00000459994 CFC1BP0CG36 223 aa9.59□□□□□ -0.87
SDF4-204ENST00000459994 CFC1P0CG37 223 aa9.59□□□□□ -0.87
SDF4-204ENST00000459994 A0A0B4J2C4 111 aa9.58□□□□□ -0.88
SDF4-204ENST00000459994 RPL37AP8A6NKH3 93 aa9.58□□□□□ -0.88
SDF4-204ENST00000459994 KRTAP11-1Q8IUC1 163 aa9.58□□□□□ -0.88
SDF4-204ENST00000459994 OR13C6PQ8NH95 151 aa9.58□□□□□ -0.88
SDF4-204ENST00000459994 CBY1Q9Y3M2 126 aa9.58□□□□□ -0.88
SDF4-204ENST00000459994 A6NDN8 102 aa9.57□□□□□ -0.88
SDF4-204ENST00000459994 HINT1P49773 126 aaPredicted RBP9.57□□□□□ -0.88
SDF4-204ENST00000459994 KCNQ1DNQ9H478 68 aa9.57□□□□□ -0.88
SDF4-204ENST00000459994 A0A1B0GWB2 263 aa9.56□□□□□ -0.88
SDF4-204ENST00000459994 RAB37Q96AX2 223 aa9.56□□□□□ -0.88
SDF4-204ENST00000459994 PRYO14603 147 aa9.55□□□□□ -0.88
SDF4-204ENST00000459994 NHP2Q9NX24 153 aaKnown RBP9.55□□□□□ -0.88
SDF4-204ENST00000459994 PRO1854Q9UHT4 67 aa9.54□□□□□ -0.88
SDF4-204ENST00000459994 PSORS1C2Q9UIG4 136 aa9.54□□□□□ -0.88
SDF4-204ENST00000459994 TRAV23DV6A0A075B6W5 121 aa9.53□□□□□ -0.88
SDF4-204ENST00000459994 SPRR1AP35321 89 aa9.53□□□□□ -0.88
SDF4-204ENST00000459994 RPL13AP40429 203 aaKnown RBP9.53□□□□□ -0.88
SDF4-204ENST00000459994 REG3GQ6UW15 175 aa9.53□□□□□ -0.88
SDF4-204ENST00000459994 UBR4Q5T4S7 5183 aa9.53□□□□□ -0.88
SDF4-204ENST00000459994 LINC01600Q96MT4 127 aa9.52□□□□□ -0.89
SDF4-204ENST00000459994 PCP4L1A6NKN8 68 aa9.51□□□□□ -0.89
SDF4-204ENST00000459994 ZNF73O43830 326 aaPredicted RBP9.5□□□□□ -0.89
SDF4-204ENST00000459994 BCE1O60756 84 aa9.5□□□□□ -0.89
SDF4-204ENST00000459994 SMIM11BQ8TCY0 68 aa9.5□□□□□ -0.89
SDF4-204ENST00000459994 KRTAP4-16G5E9R7 235 aaPredicted RBP9.49□□□□□ -0.89
SDF4-204ENST00000459994 K7ERJ3 54 aa9.49□□□□□ -0.89
SDF4-204ENST00000459994 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
SDF4-204ENST00000459994 SPINK6Q6UWN8 80 aa9.49□□□□□ -0.89
SDF4-204ENST00000459994 RPL28P46779 137 aaKnown RBP9.48□□□□□ -0.89
SDF4-204ENST00000459994 DIRC1Q969H9 104 aa9.48□□□□□ -0.89
SDF4-204ENST00000459994 KRTAP10-8P60410 259 aa9.47□□□□□ -0.89
SDF4-204ENST00000459994 BATFQ16520 125 aa9.47□□□□□ -0.89
SDF4-204ENST00000459994 C6orf99Q4VX62 202 aa9.47□□□□□ -0.89
SDF4-204ENST00000459994 TRBV7-6A0A0J9YX20 115 aa9.46□□□□□ -0.9
SDF4-204ENST00000459994 ETDCA0A1B0GVM5 59 aa9.46□□□□□ -0.9
SDF4-204ENST00000459994 H7C2G1 150 aa9.46□□□□□ -0.9
SDF4-204ENST00000459994 IGLV7-43P04211 117 aa9.46□□□□□ -0.9
SDF4-204ENST00000459994 SNHG12Q9BXW3 62 aa9.46□□□□□ -0.9
SDF4-204ENST00000459994 B5MCH6 92 aa9.45□□□□□ -0.9
SDF4-204ENST00000459994 H0Y9J4 135 aa9.45□□□□□ -0.9
SDF4-204ENST00000459994 FAM19A1Q7Z5A9 133 aa9.45□□□□□ -0.9
SDF4-204ENST00000459994 Q1RN00 199 aa9.44□□□□□ -0.9
SDF4-204ENST00000459994 KRTAP13-1Q8IUC0 172 aa9.44□□□□□ -0.9
SDF4-204ENST00000459994 TSPAN13O95857 204 aa9.43□□□□□ -0.9
SDF4-204ENST00000459994 UBE2AP49459 152 aa9.43□□□□□ -0.9
SDF4-204ENST00000459994 VAMP3Q15836 100 aa9.43□□□□□ -0.9
SDF4-204ENST00000459994 ZNF861PO60384 105 aa9.42□□□□□ -0.9
SDF4-204ENST00000459994 COX7BP24311 80 aa9.42□□□□□ -0.9
SDF4-204ENST00000459994 ELOF1P60002 83 aaKnown RBP9.42□□□□□ -0.9
SDF4-204ENST00000459994 Q6ZRX8 168 aa9.42□□□□□ -0.9
SDF4-204ENST00000459994 PRLHP81277 87 aa9.4□□□□□ -0.9
SDF4-204ENST00000459994 H0YGX0 51 aa9.39□□□□□ -0.91
SDF4-204ENST00000459994 LRP2P98164 4655 aa9.39□□□□□ -0.91
SDF4-204ENST00000459994 TRIAP1O43715 76 aa9.38□□□□□ -0.91
SDF4-204ENST00000459994 PSMB2P49721 201 aa9.38□□□□□ -0.91
SDF4-204ENST00000459994 COL5A1-AS1Q5SY13 56 aa9.38□□□□□ -0.91
SDF4-204ENST00000459994 DHRS4-AS1Q9P1J3 65 aa9.38□□□□□ -0.91
SDF4-204ENST00000459994 TAX1BP3O14907 124 aa9.37□□□□□ -0.91
SDF4-204ENST00000459994 COX6CP09669 75 aa9.37□□□□□ -0.91
SDF4-204ENST00000459994 SMCR5Q8TEV8 140 aa9.37□□□□□ -0.91
SDF4-204ENST00000459994 Q9BRP9 147 aa9.37□□□□□ -0.91
SDF4-204ENST00000459994 HIGD2AQ9BW72 106 aa9.36□□□□□ -0.91
SDF4-204ENST00000459994 LINC00575Q6W349 94 aa9.35□□□□□ -0.91
SDF4-204ENST00000459994 C9orf118A6NHY6 69 aa9.34□□□□□ -0.91
SDF4-204ENST00000459994 SLC25A20O43772 301 aa9.33□□□□□ -0.92
SDF4-204ENST00000459994 PRR26Q8N8Z3 221 aa9.33□□□□□ -0.92
SDF4-204ENST00000459994 A0A1B0GX51 115 aa9.32□□□□□ -0.92
SDF4-204ENST00000459994 ERC2-IT1O76042 136 aa9.32□□□□□ -0.92
SDF4-204ENST00000459994 SCGB1C2P0DMR2 95 aa9.32□□□□□ -0.92
SDF4-204ENST00000459994 NAA38Q9BRA0 125 aaKnown RBP9.32□□□□□ -0.92
SDF4-204ENST00000459994 H3BUT2 72 aa9.31□□□□□ -0.92
SDF4-204ENST00000459994 KRTAP1-4P0C5Y4 121 aa9.31□□□□□ -0.92
SDF4-204ENST00000459994 LPAP08519 4548 aa9.31□□□□□ -0.92
SDF4-204ENST00000459994 hADV29S1A0JD25 119 aa9.3□□□□□ -0.92
SDF4-204ENST00000459994 SNCGO76070 127 aa9.3□□□□□ -0.92
SDF4-204ENST00000459994 LYRM7Q5U5X0 104 aa9.3□□□□□ -0.92
SDF4-204ENST00000459994 FAM218AQ96MZ4 157 aa9.3□□□□□ -0.92
SDF4-204ENST00000459994 CLEC2BQ92478 149 aa9.29□□□□□ -0.92
SDF4-204ENST00000459994 ZNF706Q9Y5V0 76 aaPredicted RBP9.28□□□□□ -0.92
SDF4-204ENST00000459994 A0A1W2PPM0 123 aa9.27□□□□□ -0.93
SDF4-204ENST00000459994 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.27□□□□□ -0.93
SDF4-204ENST00000459994 SPRR4Q96PI1 79 aa9.27□□□□□ -0.93
SDF4-204ENST00000459994 LST1O00453 97 aa9.26□□□□□ -0.93
SDF4-204ENST00000459994 TRACP01848 142 aa9.25□□□□□ -0.93
SDF4-204ENST00000459994 FABP2P12104 132 aa9.25□□□□□ -0.93
SDF4-204ENST00000459994 ST20-AS1Q8NBB2 130 aa9.25□□□□□ -0.93
SDF4-204ENST00000459994 TRBV20-1A0A075B6N2 111 aa9.24□□□□□ -0.93
SDF4-204ENST00000459994 Q6ZQY7 126 aa9.24□□□□□ -0.93
SDF4-204ENST00000459994 IGLV5-48A0A075B6I7 105 aa9.23□□□□□ -0.93
SDF4-204ENST00000459994 TCL1BO95988 128 aa9.23□□□□□ -0.93
SDF4-204ENST00000459994 SPRR1BP22528 89 aa9.23□□□□□ -0.93
SDF4-204ENST00000459994 ATXN8Q156A1 80 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms