RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 INAFM2P0DMQ5 153 aa3.75□□□□□ -1.81
RNU1-88P-201ENST00000459274 UBE2AP49459 152 aa3.75□□□□□ -1.81
RNU1-88P-201ENST00000459274 FAM19A1Q7Z5A9 133 aa3.75□□□□□ -1.81
RNU1-88P-201ENST00000459274 LINC00167Q96N53 147 aa3.75□□□□□ -1.81
RNU1-88P-201ENST00000459274 ORMDL1Q9P0S3 153 aa3.75□□□□□ -1.81
RNU1-88P-201ENST00000459274 TCL1BO95988 128 aa3.74□□□□□ -1.81
RNU1-88P-201ENST00000459274 LINC01620Q4KN68 170 aa3.74□□□□□ -1.81
RNU1-88P-201ENST00000459274 CLEC2BQ92478 149 aa3.74□□□□□ -1.81
RNU1-88P-201ENST00000459274 KCNQ1DNQ9H478 68 aa3.74□□□□□ -1.81
RNU1-88P-201ENST00000459274 COL7A1Q02388 2944 aa3.73□□□□□ -1.81
RNU1-88P-201ENST00000459274 A0A087WYN8 130 aa3.73□□□□□ -1.81
RNU1-88P-201ENST00000459274 FAM168BA1KXE4 195 aa3.73□□□□□ -1.81
RNU1-88P-201ENST00000459274 H3BT86 120 aa3.73□□□□□ -1.81
RNU1-88P-201ENST00000459274 LST1O00453 97 aa3.73□□□□□ -1.81
RNU1-88P-201ENST00000459274 BAALC-AS2P0C853 105 aa3.73□□□□□ -1.81
RNU1-88P-201ENST00000459274 CHTF8P0CG12 524 aa3.73□□□□□ -1.81
RNU1-88P-201ENST00000459274 C21orf62-AS1Q17RA5 79 aa3.73□□□□□ -1.81
RNU1-88P-201ENST00000459274 SERTAD4-AS1Q5TG53 156 aa3.73□□□□□ -1.81
RNU1-88P-201ENST00000459274 SPACA4Q8TDM5 124 aa3.73□□□□□ -1.81
RNU1-88P-201ENST00000459274 LAMTOR3Q9UHA4 124 aa3.73□□□□□ -1.81
RNU1-88P-201ENST00000459274 F8WEM9 126 aa3.72□□□□□ -1.81
RNU1-88P-201ENST00000459274 ELOF1P60002 83 aaKnown RBP3.72□□□□□ -1.81
RNU1-88P-201ENST00000459274 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.72□□□□□ -1.81
RNU1-88P-201ENST00000459274 LINC00575Q6W349 94 aa3.72□□□□□ -1.81
RNU1-88P-201ENST00000459274 ANKRD29Q8N6D5 301 aa3.72□□□□□ -1.81
RNU1-88P-201ENST00000459274 A0A1W2PNN7 141 aa3.71□□□□□ -1.82
RNU1-88P-201ENST00000459274 JMJD7-PLA2G4BH0Y9G9 81 aa3.71□□□□□ -1.82
RNU1-88P-201ENST00000459274 Q6ZRX8 168 aa3.71□□□□□ -1.82
RNU1-88P-201ENST00000459274 PHF5AQ7RTV0 110 aaKnown RBP3.71□□□□□ -1.82
RNU1-88P-201ENST00000459274 PPDPFLQ8WWR9 84 aa3.71□□□□□ -1.82
RNU1-88P-201ENST00000459274 ZNF706Q9Y5V0 76 aaPredicted RBP3.71□□□□□ -1.82
RNU1-88P-201ENST00000459274 K7ERU9 68 aa3.7□□□□□ -1.82
RNU1-88P-201ENST00000459274 DEFB105AQ8NG35 78 aa3.7□□□□□ -1.82
RNU1-88P-201ENST00000459274 HIGD2AQ9BW72 106 aa3.7□□□□□ -1.82
RNU1-88P-201ENST00000459274 PLAC8Q9NZF1 115 aa3.7□□□□□ -1.82
RNU1-88P-201ENST00000459274 H0Y9J4 135 aa3.69□□□□□ -1.82
RNU1-88P-201ENST00000459274 BCE1O60756 84 aa3.69□□□□□ -1.82
RNU1-88P-201ENST00000459274 PDE6GP18545 87 aa3.69□□□□□ -1.82
RNU1-88P-201ENST00000459274 KRTAP10-2P60368 255 aa3.69□□□□□ -1.82
RNU1-88P-201ENST00000459274 C1orf137Q5JT78 98 aa3.69□□□□□ -1.82
RNU1-88P-201ENST00000459274 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
RNU1-88P-201ENST00000459274 Q6ZQY7 126 aa3.69□□□□□ -1.82
RNU1-88P-201ENST00000459274 DSCR8Q96T75 97 aa3.69□□□□□ -1.82
RNU1-88P-201ENST00000459274 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.69□□□□□ -1.82
RNU1-88P-201ENST00000459274 MEGF8Q7Z7M0 2845 aa3.68□□□□□ -1.82
RNU1-88P-201ENST00000459274 TEX49A0A1B0GTD5 131 aa3.68□□□□□ -1.82
RNU1-88P-201ENST00000459274 B5MCH6 92 aa3.68□□□□□ -1.82
RNU1-88P-201ENST00000459274 FUSP35637 526 aaKnown RBP eCLIP3.68□□□□□ -1.82
RNU1-88P-201ENST00000459274 RBM3P98179 157 aaKnown RBP3.68□□□□□ -1.82
RNU1-88P-201ENST00000459274 TEN1Q86WV5 123 aa3.68□□□□□ -1.82
RNU1-88P-201ENST00000459274 LINC00528Q8N1L1 170 aa3.68□□□□□ -1.82
RNU1-88P-201ENST00000459274 Q8NDZ9 215 aa3.68□□□□□ -1.82
RNU1-88P-201ENST00000459274 TENM2Q9NT68 2774 aa3.67□□□□□ -1.82
RNU1-88P-201ENST00000459274 EPM2AB3EWF7 344 aa3.67□□□□□ -1.82
RNU1-88P-201ENST00000459274 SPRR1AP35321 89 aa3.67□□□□□ -1.82
RNU1-88P-201ENST00000459274 PRLHP81277 87 aa3.67□□□□□ -1.82
RNU1-88P-201ENST00000459274 ETDBQ3ZM63 59 aa3.67□□□□□ -1.82
RNU1-88P-201ENST00000459274 MTURNQ8N3F0 131 aa3.67□□□□□ -1.82
RNU1-88P-201ENST00000459274 CIRBP-AS1Q8TBR5 109 aa3.67□□□□□ -1.82
RNU1-88P-201ENST00000459274 SMCR5Q8TEV8 140 aa3.67□□□□□ -1.82
RNU1-88P-201ENST00000459274 FAM229AH3BQW9 127 aa3.66□□□□□ -1.82
RNU1-88P-201ENST00000459274 NDUFV3P56181 108 aaKnown RBP3.66□□□□□ -1.82
RNU1-88P-201ENST00000459274 SCXQ7RTU7 201 aa3.66□□□□□ -1.82
RNU1-88P-201ENST00000459274 FAM218AQ96MZ4 157 aa3.66□□□□□ -1.82
RNU1-88P-201ENST00000459274 ANK2Q01484 3957 aa3.66□□□□□ -1.82
RNU1-88P-201ENST00000459274 TGP01266 2768 aa3.66□□□□□ -1.82
RNU1-88P-201ENST00000459274 FBN3Q75N90 2809 aa3.66□□□□□ -1.82
RNU1-88P-201ENST00000459274 ZNF861PO60384 105 aa3.65□□□□□ -1.83
RNU1-88P-201ENST00000459274 PLA2G1BP04054 148 aaKnown RBP3.65□□□□□ -1.83
RNU1-88P-201ENST00000459274 ACYP1P07311 99 aa3.65□□□□□ -1.83
RNU1-88P-201ENST00000459274 KRTAP10-1P60331 282 aa3.65□□□□□ -1.83
RNU1-88P-201ENST00000459274 GAGE2AQ6NT46 116 aa3.65□□□□□ -1.83
RNU1-88P-201ENST00000459274 PSORS1C2Q9UIG4 136 aa3.65□□□□□ -1.83
RNU1-88P-201ENST00000459274 IGLV7-43P04211 117 aa3.64□□□□□ -1.83
RNU1-88P-201ENST00000459274 RPL37AP61513 92 aaKnown RBP3.64□□□□□ -1.83
RNU1-88P-201ENST00000459274 Q6ZSA8 131 aa3.64□□□□□ -1.83
RNU1-88P-201ENST00000459274 KRTAP7-1Q8IUC3 87 aa3.64□□□□□ -1.83
RNU1-88P-201ENST00000459274 KRTAP4-16G5E9R7 235 aaPredicted RBP3.63□□□□□ -1.83
RNU1-88P-201ENST00000459274 PANO1I0J062 215 aa3.63□□□□□ -1.83
RNU1-88P-201ENST00000459274 Q6JHZ5 121 aa3.63□□□□□ -1.83
RNU1-88P-201ENST00000459274 VPS25Q9BRG1 176 aa3.63□□□□□ -1.83
RNU1-88P-201ENST00000459274 C9orf153Q5TBE3 101 aa3.62□□□□□ -1.83
RNU1-88P-201ENST00000459274 LINC01600Q96MT4 127 aa3.62□□□□□ -1.83
RNU1-88P-201ENST00000459274 Q9BRP9 147 aa3.62□□□□□ -1.83
RNU1-88P-201ENST00000459274 FAM30AQ9NZY2 134 aa3.62□□□□□ -1.83
RNU1-88P-201ENST00000459274 PRO0461Q9UI25 63 aa3.62□□□□□ -1.83
RNU1-88P-201ENST00000459274 A0A1B0GV72 72 aa3.61□□□□□ -1.83
RNU1-88P-201ENST00000459274 A0A1B0GVY2 172 aa3.61□□□□□ -1.83
RNU1-88P-201ENST00000459274 A0A1B0GW54 56 aa3.61□□□□□ -1.83
RNU1-88P-201ENST00000459274 C4orf48Q5BLP8 95 aa3.61□□□□□ -1.83
RNU1-88P-201ENST00000459274 SPINK6Q6UWN8 80 aa3.61□□□□□ -1.83
RNU1-88P-201ENST00000459274 UBL5Q9BZL1 73 aa3.61□□□□□ -1.83
RNU1-88P-201ENST00000459274 C14orf132Q9NPU4 83 aa3.61□□□□□ -1.83
RNU1-88P-201ENST00000459274 DNAH3Q8TD57 4116 aa3.6□□□□□ -1.83
RNU1-88P-201ENST00000459274 IGLV5-48A0A075B6I7 105 aa3.6□□□□□ -1.83
RNU1-88P-201ENST00000459274 CCKP06307 115 aa3.6□□□□□ -1.83
RNU1-88P-201ENST00000459274 CMYA5Q8N3K9 4069 aa3.6□□□□□ -1.83
RNU1-88P-201ENST00000459274 LOC110117498A0A087WWA1 95 aa3.59□□□□□ -1.83
RNU1-88P-201ENST00000459274 IGLV9-49A0A0B4J1Y8 123 aa3.59□□□□□ -1.83
RNU1-88P-201ENST00000459274 CDK2AP2O75956 126 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms