RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 LINC00308Q8TCZ7 52 aa10.25□□□□□ -0.77
SCARNA2-201ENST00000458748 SOSTDC1Q6X4U4 206 aa10.24□□□□□ -0.77
SCARNA2-201ENST00000458748 SCGB1D4Q6XE38 83 aa10.24□□□□□ -0.77
SCARNA2-201ENST00000458748 S100A2P29034 98 aa10.23□□□□□ -0.77
SCARNA2-201ENST00000458748 SPAG11AQ6PDA7 123 aa10.23□□□□□ -0.77
SCARNA2-201ENST00000458748 Q6ZRX8 168 aa10.23□□□□□ -0.77
SCARNA2-201ENST00000458748 LPAP08519 4548 aa10.23□□□□□ -0.77
SCARNA2-201ENST00000458748 ZNF73O43830 326 aaPredicted RBP10.22□□□□□ -0.77
SCARNA2-201ENST00000458748 SNRPEP62304 92 aaKnown RBP10.22□□□□□ -0.77
SCARNA2-201ENST00000458748 C4orf48Q5BLP8 95 aa10.22□□□□□ -0.77
SCARNA2-201ENST00000458748 LINC00518Q8N0U6 118 aa10.22□□□□□ -0.77
SCARNA2-201ENST00000458748 LITAFQ99732 161 aa10.22□□□□□ -0.77
SCARNA2-201ENST00000458748 OR13C6PQ8NH95 151 aa10.21□□□□□ -0.77
SCARNA2-201ENST00000458748 S100A6P06703 90 aa10.19□□□□□ -0.78
SCARNA2-201ENST00000458748 C3orf22Q8N5N4 141 aa10.19□□□□□ -0.78
SCARNA2-201ENST00000458748 SPANXDQ9BXN6 97 aa10.19□□□□□ -0.78
SCARNA2-201ENST00000458748 EIF4EBP3O60516 100 aaPredicted RBP10.18□□□□□ -0.78
SCARNA2-201ENST00000458748 LINC00483Q53H64 154 aa10.18□□□□□ -0.78
SCARNA2-201ENST00000458748 GAGE2AQ6NT46 116 aa10.18□□□□□ -0.78
SCARNA2-201ENST00000458748 Q6ZVH6 145 aa10.18□□□□□ -0.78
SCARNA2-201ENST00000458748 TTTY13Q9BZ97 58 aa10.18□□□□□ -0.78
SCARNA2-201ENST00000458748 PPDPFQ9H3Y8 114 aa10.18□□□□□ -0.78
SCARNA2-201ENST00000458748 ATOH7Q8N100 152 aa10.17□□□□□ -0.78
SCARNA2-201ENST00000458748 C5orf52A6NGY3 159 aa10.16□□□□□ -0.78
SCARNA2-201ENST00000458748 HSBP1L1C9JCN9 74 aa10.16□□□□□ -0.78
SCARNA2-201ENST00000458748 IFITM1P13164 125 aa10.16□□□□□ -0.78
SCARNA2-201ENST00000458748 ANKRD39Q53RE8 183 aa10.16□□□□□ -0.78
SCARNA2-201ENST00000458748 Q9BRP9 147 aa10.16□□□□□ -0.78
SCARNA2-201ENST00000458748 HIST3H2BBQ8N257 126 aa10.15□□□□□ -0.78
SCARNA2-201ENST00000458748 ERC2-IT1O76042 136 aa10.13□□□□□ -0.79
SCARNA2-201ENST00000458748 Q8NBF4 154 aa10.13□□□□□ -0.79
SCARNA2-201ENST00000458748 HIST1H2BLQ99880 126 aa10.13□□□□□ -0.79
SCARNA2-201ENST00000458748 DHRS4-AS1Q9P1J3 65 aa10.12□□□□□ -0.79
SCARNA2-201ENST00000458748 IGLV9-49A0A0B4J1Y8 123 aa10.11□□□□□ -0.79
SCARNA2-201ENST00000458748 SPINK1P00995 79 aa10.11□□□□□ -0.79
SCARNA2-201ENST00000458748 SSBP3-AS1Q7Z2R9 100 aa10.11□□□□□ -0.79
SCARNA2-201ENST00000458748 SLC25A34Q6PIV7 304 aa10.1□□□□□ -0.79
SCARNA2-201ENST00000458748 PCP2Q8IVA1 136 aa10.1□□□□□ -0.79
SCARNA2-201ENST00000458748 RETNLBQ9BQ08 111 aa10.09□□□□□ -0.79
SCARNA2-201ENST00000458748 COX7BP24311 80 aa10.08□□□□□ -0.8
SCARNA2-201ENST00000458748 MOBPQ13875 183 aa10.08□□□□□ -0.8
SCARNA2-201ENST00000458748 IGLV7-46A0A075B6I9 117 aa10.07□□□□□ -0.8
SCARNA2-201ENST00000458748 A6NDN8 102 aa10.07□□□□□ -0.8
SCARNA2-201ENST00000458748 TRBV7-6A0A0J9YX20 115 aa10.06□□□□□ -0.8
SCARNA2-201ENST00000458748 ELOF1P60002 83 aaKnown RBP10.06□□□□□ -0.8
SCARNA2-201ENST00000458748 C6orf99Q4VX62 202 aa10.06□□□□□ -0.8
SCARNA2-201ENST00000458748 C9orf153Q5TBE3 101 aa10.06□□□□□ -0.8
SCARNA2-201ENST00000458748 MUSTN1Q8IVN3 82 aa10.06□□□□□ -0.8
SCARNA2-201ENST00000458748 TRAV13-2A0A0B4J235 113 aa10.05□□□□□ -0.8
SCARNA2-201ENST00000458748 FP248Q71RG6 208 aaPredicted RBP10.05□□□□□ -0.8
SCARNA2-201ENST00000458748 RPS29P62273 56 aaKnown RBP10.04□□□□□ -0.8
SCARNA2-201ENST00000458748 TPRXLQ17RH7 258 aa10.04□□□□□ -0.8
SCARNA2-201ENST00000458748 SCGB1D1O95968 90 aa10.03□□□□□ -0.8
SCARNA2-201ENST00000458748 ST20-AS1Q8NBB2 130 aa10.03□□□□□ -0.8
SCARNA2-201ENST00000458748 CDIP1Q9H305 208 aa10.03□□□□□ -0.8
SCARNA2-201ENST00000458748 A0A1B0GWB2 263 aa10.02□□□□□ -0.81
SCARNA2-201ENST00000458748 A4D1N5 150 aa10.02□□□□□ -0.81
SCARNA2-201ENST00000458748 LAMTOR3Q9UHA4 124 aa10.02□□□□□ -0.81
SCARNA2-201ENST00000458748 SPRR1BP22528 89 aa10□□□□□ -0.81
SCARNA2-201ENST00000458748 NHP2Q9NX24 153 aaKnown RBP10□□□□□ -0.81
SCARNA2-201ENST00000458748 TAL2Q16559 108 aa9.99□□□□□ -0.81
SCARNA2-201ENST00000458748 SLC25A20O43772 301 aa9.98□□□□□ -0.81
SCARNA2-201ENST00000458748 VAMP3Q15836 100 aa9.97□□□□□ -0.81
SCARNA2-201ENST00000458748 TEX49A0A1B0GTD5 131 aa9.96□□□□□ -0.82
SCARNA2-201ENST00000458748 DEFB105AQ8NG35 78 aa9.95□□□□□ -0.82
SCARNA2-201ENST00000458748 A0A0U1RQV1 116 aa9.93□□□□□ -0.82
SCARNA2-201ENST00000458748 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
SCARNA2-201ENST00000458748 LIMD2Q9BT23 127 aa9.93□□□□□ -0.82
SCARNA2-201ENST00000458748 MUC2Q02817 5179 aa9.92□□□□□ -0.82
SCARNA2-201ENST00000458748 Q8N377 158 aa9.92□□□□□ -0.82
SCARNA2-201ENST00000458748 HIST1H4GQ99525 98 aa9.92□□□□□ -0.82
SCARNA2-201ENST00000458748 COX8AP10176 69 aa9.91□□□□□ -0.82
SCARNA2-201ENST00000458748 PRO1933Q9H354 126 aa9.91□□□□□ -0.82
SCARNA2-201ENST00000458748 DLEU1O43261 78 aa9.9□□□□□ -0.82
SCARNA2-201ENST00000458748 Q1RN00 199 aa9.89□□□□□ -0.83
SCARNA2-201ENST00000458748 IGLV5-48A0A075B6I7 105 aa9.88□□□□□ -0.83
SCARNA2-201ENST00000458748 CD164Q04900 197 aa9.87□□□□□ -0.83
SCARNA2-201ENST00000458748 VAMP8Q9BV40 100 aa9.86□□□□□ -0.83
SCARNA2-201ENST00000458748 KRTAP13-3Q3SY46 172 aa9.85□□□□□ -0.83
SCARNA2-201ENST00000458748 H7C2G1 150 aa9.84□□□□□ -0.83
SCARNA2-201ENST00000458748 SPATA45Q537H7 98 aa9.84□□□□□ -0.83
SCARNA2-201ENST00000458748 BVES-AS1Q5T3Y7 98 aa9.84□□□□□ -0.83
SCARNA2-201ENST00000458748 HRCT1Q6UXD1 115 aa9.84□□□□□ -0.83
SCARNA2-201ENST00000458748 PAM16Q9Y3D7 125 aa9.84□□□□□ -0.83
SCARNA2-201ENST00000458748 hADV29S1A0JD25 119 aa9.83□□□□□ -0.84
SCARNA2-201ENST00000458748 F8WEM9 126 aa9.83□□□□□ -0.84
SCARNA2-201ENST00000458748 LINC00575Q6W349 94 aa9.83□□□□□ -0.84
SCARNA2-201ENST00000458748 LINC01547P58512 204 aaPredicted RBP9.82□□□□□ -0.84
SCARNA2-201ENST00000458748 C14orf144Q96I85 54 aa9.82□□□□□ -0.84
SCARNA2-201ENST00000458748 C12orf57Q99622 126 aa9.82□□□□□ -0.84
SCARNA2-201ENST00000458748 HIGD1BQ9P298 99 aa9.82□□□□□ -0.84
SCARNA2-201ENST00000458748 SNCGO76070 127 aa9.81□□□□□ -0.84
SCARNA2-201ENST00000458748 SMIM29Q86T20 159 aa9.81□□□□□ -0.84
SCARNA2-201ENST00000458748 RAB37Q96AX2 223 aa9.8□□□□□ -0.84
SCARNA2-201ENST00000458748 SEC61BP60468 96 aaKnown RBP9.77□□□□□ -0.85
SCARNA2-201ENST00000458748 Q6ZQY7 126 aa9.77□□□□□ -0.85
SCARNA2-201ENST00000458748 Q5XG85 94 aa9.76□□□□□ -0.85
SCARNA2-201ENST00000458748 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.76□□□□□ -0.85
SCARNA2-201ENST00000458748 PPDPFLQ8WWR9 84 aa9.76□□□□□ -0.85
SCARNA2-201ENST00000458748 TMEM238LA0A1B0GVL6 79 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms