RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 LITAFQ99732 161 aa9.41□□□□□ -0.9
CPSF6-203ENST00000456847 RETNLBQ9BQ08 111 aa9.41□□□□□ -0.9
CPSF6-203ENST00000456847 TMA7Q9Y2S6 64 aaKnown RBP9.41□□□□□ -0.9
CPSF6-203ENST00000456847 SPANXCQ9NY87 97 aa9.41□□□□□ -0.9
CPSF6-203ENST00000456847 GAGE2AQ6NT46 116 aa9.4□□□□□ -0.9
CPSF6-203ENST00000456847 CBY1Q9Y3M2 126 aa9.4□□□□□ -0.9
CPSF6-203ENST00000456847 OR13C6PQ8NH95 151 aa9.39□□□□□ -0.91
CPSF6-203ENST00000456847 ERC2-IT1O76042 136 aa9.39□□□□□ -0.91
CPSF6-203ENST00000456847 JOSD1Q15040 202 aaPredicted RBP9.39□□□□□ -0.91
CPSF6-203ENST00000456847 ATOH7Q8N100 152 aa9.39□□□□□ -0.91
CPSF6-203ENST00000456847 Q9BRP9 147 aa9.39□□□□□ -0.91
CPSF6-203ENST00000456847 ZNF73O43830 326 aaPredicted RBP9.38□□□□□ -0.91
CPSF6-203ENST00000456847 C4orf48Q5BLP8 95 aa9.38□□□□□ -0.91
CPSF6-203ENST00000456847 SCGB1D4Q6XE38 83 aa9.38□□□□□ -0.91
CPSF6-203ENST00000456847 SPAG11AQ6PDA7 123 aa9.37□□□□□ -0.91
CPSF6-203ENST00000456847 HINT1P49773 126 aaPredicted RBP9.37□□□□□ -0.91
CPSF6-203ENST00000456847 CTAG1AP78358 180 aa9.37□□□□□ -0.91
CPSF6-203ENST00000456847 LINC00483Q53H64 154 aa9.37□□□□□ -0.91
CPSF6-203ENST00000456847 Q8NBF4 154 aa9.37□□□□□ -0.91
CPSF6-203ENST00000456847 ANKRD39Q53RE8 183 aa9.36□□□□□ -0.91
CPSF6-203ENST00000456847 AKR1D1P51857 326 aa9.35□□□□□ -0.91
CPSF6-203ENST00000456847 IGLV9-49A0A0B4J1Y8 123 aa9.35□□□□□ -0.91
CPSF6-203ENST00000456847 SPANXDQ9BXN6 97 aa9.34□□□□□ -0.91
CPSF6-203ENST00000456847 S100A2P29034 98 aa9.33□□□□□ -0.92
CPSF6-203ENST00000456847 MOBPQ13875 183 aa9.33□□□□□ -0.92
CPSF6-203ENST00000456847 LINC00518Q8N0U6 118 aa9.32□□□□□ -0.92
CPSF6-203ENST00000456847 COPS9Q8WXC6 57 aa9.32□□□□□ -0.92
CPSF6-203ENST00000456847 IGLV7-46A0A075B6I9 117 aa9.31□□□□□ -0.92
CPSF6-203ENST00000456847 HIST3H2BBQ8N257 126 aa9.31□□□□□ -0.92
CPSF6-203ENST00000456847 C9orf153Q5TBE3 101 aa9.29□□□□□ -0.92
CPSF6-203ENST00000456847 PCP2Q8IVA1 136 aa9.29□□□□□ -0.92
CPSF6-203ENST00000456847 RNF213Q63HN8 5207 aa9.29□□□□□ -0.92
CPSF6-203ENST00000456847 S100A6P06703 90 aa9.29□□□□□ -0.92
CPSF6-203ENST00000456847 ST20-AS1Q8NBB2 130 aa9.29□□□□□ -0.92
CPSF6-203ENST00000456847 HIST1H2BLQ99880 126 aa9.29□□□□□ -0.92
CPSF6-203ENST00000456847 IFITM1P13164 125 aa9.28□□□□□ -0.92
CPSF6-203ENST00000456847 SNRPEP62304 92 aaKnown RBP9.28□□□□□ -0.92
CPSF6-203ENST00000456847 SPINK1P00995 79 aa9.27□□□□□ -0.93
CPSF6-203ENST00000456847 SSBP3-AS1Q7Z2R9 100 aa9.27□□□□□ -0.93
CPSF6-203ENST00000456847 COX7BP24311 80 aa9.27□□□□□ -0.93
CPSF6-203ENST00000456847 C6orf99Q4VX62 202 aa9.27□□□□□ -0.93
CPSF6-203ENST00000456847 Q6ZVH6 145 aa9.27□□□□□ -0.93
CPSF6-203ENST00000456847 DHRS4-AS1Q9P1J3 65 aa9.27□□□□□ -0.93
CPSF6-203ENST00000456847 HSBP1L1C9JCN9 74 aa9.26□□□□□ -0.93
CPSF6-203ENST00000456847 CDIP1Q9H305 208 aa9.26□□□□□ -0.93
CPSF6-203ENST00000456847 C5orf52A6NGY3 159 aa9.25□□□□□ -0.93
CPSF6-203ENST00000456847 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
CPSF6-203ENST00000456847 A6NDN8 102 aa9.25□□□□□ -0.93
CPSF6-203ENST00000456847 ELOF1P60002 83 aaKnown RBP9.25□□□□□ -0.93
CPSF6-203ENST00000456847 MUSTN1Q8IVN3 82 aa9.25□□□□□ -0.93
CPSF6-203ENST00000456847 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
CPSF6-203ENST00000456847 SLC25A34Q6PIV7 304 aa9.22□□□□□ -0.93
CPSF6-203ENST00000456847 RPS29P62273 56 aaKnown RBP9.19□□□□□ -0.94
CPSF6-203ENST00000456847 TRAV13-2A0A0B4J235 113 aa9.19□□□□□ -0.94
CPSF6-203ENST00000456847 TRBV7-6A0A0J9YX20 115 aa9.19□□□□□ -0.94
CPSF6-203ENST00000456847 A0A1B0GWB2 263 aa9.19□□□□□ -0.94
CPSF6-203ENST00000456847 SPRR1BP22528 89 aa9.19□□□□□ -0.94
CPSF6-203ENST00000456847 TAL2Q16559 108 aa9.19□□□□□ -0.94
CPSF6-203ENST00000456847 SVIPQ8NHG7 77 aa9.19□□□□□ -0.94
CPSF6-203ENST00000456847 LAMTOR3Q9UHA4 124 aa9.19□□□□□ -0.94
CPSF6-203ENST00000456847 DEFB105AQ8NG35 78 aa9.18□□□□□ -0.94
CPSF6-203ENST00000456847 SCGB1D1O95968 90 aa9.17□□□□□ -0.94
CPSF6-203ENST00000456847 Q8N377 158 aa9.17□□□□□ -0.94
CPSF6-203ENST00000456847 SLC25A20O43772 301 aa9.16□□□□□ -0.94
CPSF6-203ENST00000456847 Q1RN00 199 aa9.15□□□□□ -0.95
CPSF6-203ENST00000456847 SMIM11BQ8TCY0 68 aa9.14□□□□□ -0.95
CPSF6-203ENST00000456847 A0A0U1RQV1 116 aa9.13□□□□□ -0.95
CPSF6-203ENST00000456847 TEX49A0A1B0GTD5 131 aa9.13□□□□□ -0.95
CPSF6-203ENST00000456847 A4D1N5 150 aa9.13□□□□□ -0.95
CPSF6-203ENST00000456847 HRCT1Q6UXD1 115 aa9.13□□□□□ -0.95
CPSF6-203ENST00000456847 KRTAP13-3Q3SY46 172 aa9.12□□□□□ -0.95
CPSF6-203ENST00000456847 NHP2Q9NX24 153 aaKnown RBP9.12□□□□□ -0.95
CPSF6-203ENST00000456847 LIMD2Q9BT23 127 aa9.11□□□□□ -0.95
CPSF6-203ENST00000456847 VAMP3Q15836 100 aa9.09□□□□□ -0.95
CPSF6-203ENST00000456847 HIST1H4GQ99525 98 aa9.09□□□□□ -0.95
CPSF6-203ENST00000456847 PRO1933Q9H354 126 aa9.09□□□□□ -0.95
CPSF6-203ENST00000456847 IGLV5-48A0A075B6I7 105 aa9.07□□□□□ -0.96
CPSF6-203ENST00000456847 COX8AP10176 69 aa9.07□□□□□ -0.96
CPSF6-203ENST00000456847 MUC17Q685J3 4493 aa9.07□□□□□ -0.96
CPSF6-203ENST00000456847 C12orf57Q99622 126 aa9.07□□□□□ -0.96
CPSF6-203ENST00000456847 LINC01547P58512 204 aaPredicted RBP9.06□□□□□ -0.96
CPSF6-203ENST00000456847 SMIM29Q86T20 159 aa9.05□□□□□ -0.96
CPSF6-203ENST00000456847 H7C2G1 150 aa9.04□□□□□ -0.96
CPSF6-203ENST00000456847 TMEM238LA0A1B0GVL6 79 aa9.03□□□□□ -0.96
CPSF6-203ENST00000456847 CD164Q04900 197 aa9.03□□□□□ -0.96
CPSF6-203ENST00000456847 PAM16Q9Y3D7 125 aa9.03□□□□□ -0.96
CPSF6-203ENST00000456847 DLEU1O43261 78 aa9.02□□□□□ -0.97
CPSF6-203ENST00000456847 SPATA45Q537H7 98 aa9.02□□□□□ -0.97
CPSF6-203ENST00000456847 LINC00575Q6W349 94 aa9.02□□□□□ -0.97
CPSF6-203ENST00000456847 C14orf144Q96I85 54 aa9.02□□□□□ -0.97
CPSF6-203ENST00000456847 F8WEM9 126 aa9.01□□□□□ -0.97
CPSF6-203ENST00000456847 hADV29S1A0JD25 119 aa9.01□□□□□ -0.97
CPSF6-203ENST00000456847 VAMP8Q9BV40 100 aa9.01□□□□□ -0.97
CPSF6-203ENST00000456847 MUC2Q02817 5179 aa9□□□□□ -0.97
CPSF6-203ENST00000456847 SEC61BP60468 96 aaKnown RBP8.99□□□□□ -0.97
CPSF6-203ENST00000456847 Q6ZQY7 126 aa8.99□□□□□ -0.97
CPSF6-203ENST00000456847 A0A0G2JQZ4 141 aa8.99□□□□□ -0.97
CPSF6-203ENST00000456847 ASB16-AS1Q495Z4 193 aa8.99□□□□□ -0.97
CPSF6-203ENST00000456847 BVES-AS1Q5T3Y7 98 aa8.98□□□□□ -0.97
CPSF6-203ENST00000456847 RAB37Q96AX2 223 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms