RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 SMIM20Q8N5G0 67 aa7.06□□□□□ -1.28
GTF3C2-206ENST00000454704 CAMK2N2Q96S95 79 aa7.06□□□□□ -1.28
GTF3C2-206ENST00000454704 USP17L23D6RBM5 183 aa7.05□□□□□ -1.28
GTF3C2-206ENST00000454704 Q8NDZ9 215 aa7.05□□□□□ -1.28
GTF3C2-206ENST00000454704 SVIPQ8NHG7 77 aa7.05□□□□□ -1.28
GTF3C2-206ENST00000454704 RETNQ9HD89 108 aa7.05□□□□□ -1.28
GTF3C2-206ENST00000454704 LAMTOR3Q9UHA4 124 aa7.05□□□□□ -1.28
GTF3C2-206ENST00000454704 NDUFC2-KCTD14E9PQ53 114 aa7.04□□□□□ -1.28
GTF3C2-206ENST00000454704 ZNF73O43830 326 aaPredicted RBP7.04□□□□□ -1.28
GTF3C2-206ENST00000454704 VPREB1P12018 145 aa7.04□□□□□ -1.28
GTF3C2-206ENST00000454704 LINC01556Q5JQF7 62 aa7.04□□□□□ -1.28
GTF3C2-206ENST00000454704 KRTAP26-1Q6PEX3 210 aa7.04□□□□□ -1.28
GTF3C2-206ENST00000454704 CXCL6P80162 114 aa7.03□□□□□ -1.28
GTF3C2-206ENST00000454704 Q6ZQY7 126 aa7.03□□□□□ -1.28
GTF3C2-206ENST00000454704 C1orf43Q9BWL3 253 aa7.03□□□□□ -1.28
GTF3C2-206ENST00000454704 TMEM258P61165 79 aa7.02□□□□□ -1.29
GTF3C2-206ENST00000454704 RPS28P62857 69 aaKnown RBP7.01□□□□□ -1.29
GTF3C2-206ENST00000454704 WFDC10BQ8IUB3 73 aa7.01□□□□□ -1.29
GTF3C2-206ENST00000454704 KMT2AQ03164 3969 aa7.01□□□□□ -1.29
GTF3C2-206ENST00000454704 TRBV7-4A0A0J9YYF1 115 aa7.01□□□□□ -1.29
GTF3C2-206ENST00000454704 A0A1B0GW54 56 aa7.01□□□□□ -1.29
GTF3C2-206ENST00000454704 PLA2G2DQ9UNK4 145 aa7.01□□□□□ -1.29
GTF3C2-206ENST00000454704 TLX1NBP0CAT3 122 aa7□□□□□ -1.29
GTF3C2-206ENST00000454704 C15orf56Q8N910 161 aa7□□□□□ -1.29
GTF3C2-206ENST00000454704 DNAH10Q8IVF4 4471 aa7□□□□□ -1.29
GTF3C2-206ENST00000454704 Q6ZRU5 148 aa6.99□□□□□ -1.29
GTF3C2-206ENST00000454704 LINC00528Q8N1L1 170 aa6.99□□□□□ -1.29
GTF3C2-206ENST00000454704 UPK3BQ9BT76 320 aa6.99□□□□□ -1.29
GTF3C2-206ENST00000454704 KRTAP17-1Q9BYP8 105 aa6.99□□□□□ -1.29
GTF3C2-206ENST00000454704 HERC2O95714 4834 aa6.98□□□□□ -1.29
GTF3C2-206ENST00000454704 A0A087WVE0 104 aa6.98□□□□□ -1.29
GTF3C2-206ENST00000454704 J3KT08 172 aa6.98□□□□□ -1.29
GTF3C2-206ENST00000454704 DNAH10OSP0CZ25 163 aa6.98□□□□□ -1.29
GTF3C2-206ENST00000454704 SYCNQ0VAF6 134 aa6.98□□□□□ -1.29
GTF3C2-206ENST00000454704 Q6ZTC4 211 aa6.98□□□□□ -1.29
GTF3C2-206ENST00000454704 Q6ZVQ6 151 aa6.98□□□□□ -1.29
GTF3C2-206ENST00000454704 XAGE1AQ9HD64 81 aa6.98□□□□□ -1.29
GTF3C2-206ENST00000454704 ESRGQ1W209 222 aa6.97□□□□□ -1.29
GTF3C2-206ENST00000454704 RMI2Q96E14 147 aa6.97□□□□□ -1.29
GTF3C2-206ENST00000454704 IGLV5-37A0A075B6J1 123 aa6.96□□□□□ -1.3
GTF3C2-206ENST00000454704 TRAV7A0A075B6U4 112 aa6.96□□□□□ -1.3
GTF3C2-206ENST00000454704 DEFB131BA0A096LNP1 70 aa6.96□□□□□ -1.3
GTF3C2-206ENST00000454704 LOC107984640A0A0U1RRK4 108 aa6.96□□□□□ -1.3
GTF3C2-206ENST00000454704 LINC01547P58512 204 aaPredicted RBP6.96□□□□□ -1.3
GTF3C2-206ENST00000454704 HIGD2BQ4VC39 106 aa6.96□□□□□ -1.3
GTF3C2-206ENST00000454704 LINC00476Q8WZB0 136 aa6.96□□□□□ -1.3
GTF3C2-206ENST00000454704 KCNQ1DNQ9H478 68 aa6.96□□□□□ -1.3
GTF3C2-206ENST00000454704 NKAPP1Q8N9T2 125 aa6.95□□□□□ -1.3
GTF3C2-206ENST00000454704 C11orf45Q8TAV5 145 aa6.95□□□□□ -1.3
GTF3C2-206ENST00000454704 IGKV2D-24A0A075B6R9 120 aa6.94□□□□□ -1.3
GTF3C2-206ENST00000454704 PRYO14603 147 aa6.94□□□□□ -1.3
GTF3C2-206ENST00000454704 LY6G6CO95867 125 aa6.94□□□□□ -1.3
GTF3C2-206ENST00000454704 DHRS4-AS1Q9P1J3 65 aa6.94□□□□□ -1.3
GTF3C2-206ENST00000454704 HECTD4Q9Y4D8 3996 aa6.94□□□□□ -1.3
GTF3C2-206ENST00000454704 TRAV10A0A0B4J240 114 aa6.93□□□□□ -1.3
GTF3C2-206ENST00000454704 FAM19A1Q7Z5A9 133 aa6.93□□□□□ -1.3
GTF3C2-206ENST00000454704 VPS13DQ5THJ4 4388 aa6.92□□□□□ -1.3
GTF3C2-206ENST00000454704 HAMPP81172 84 aa6.92□□□□□ -1.3
GTF3C2-206ENST00000454704 Q6ZRP5 223 aa6.92□□□□□ -1.3
GTF3C2-206ENST00000454704 PCLOQ9Y6V0 5065 aa6.91□□□□□ -1.3
GTF3C2-206ENST00000454704 DNAH6Q9C0G6 4158 aa6.91□□□□□ -1.3
GTF3C2-206ENST00000454704 NUPR2A6NF83 97 aa6.9□□□□□ -1.31
GTF3C2-206ENST00000454704 IGLV5-48A0A075B6I7 105 aa6.89□□□□□ -1.31
GTF3C2-206ENST00000454704 NDUFC1O43677 76 aa6.89□□□□□ -1.31
GTF3C2-206ENST00000454704 ERC2-IT1O76042 136 aa6.89□□□□□ -1.31
GTF3C2-206ENST00000454704 SPRR1AP35321 89 aa6.89□□□□□ -1.31
GTF3C2-206ENST00000454704 KLKP1Q107X0 134 aa6.89□□□□□ -1.31
GTF3C2-206ENST00000454704 KIAA1109Q2LD37 5005 aa6.89□□□□□ -1.31
GTF3C2-206ENST00000454704 C7orf33Q8WU49 177 aa6.88□□□□□ -1.31
GTF3C2-206ENST00000454704 M0R2N4 97 aa6.87□□□□□ -1.31
GTF3C2-206ENST00000454704 Q6ZRX8 168 aa6.87□□□□□ -1.31
GTF3C2-206ENST00000454704 DPH3Q96FX2 82 aa6.87□□□□□ -1.31
GTF3C2-206ENST00000454704 RYR1P21817 5038 aa6.87□□□□□ -1.31
GTF3C2-206ENST00000454704 ATP5EP56381 51 aaPredicted RBP6.86□□□□□ -1.31
GTF3C2-206ENST00000454704 IGLV1-50A0A075B6I6 118 aa6.85□□□□□ -1.31
GTF3C2-206ENST00000454704 ETDCA0A1B0GVM5 59 aa6.85□□□□□ -1.31
GTF3C2-206ENST00000454704 FUSP35637 526 aaKnown RBP eCLIP6.85□□□□□ -1.31
GTF3C2-206ENST00000454704 NREPQ16612 68 aa6.85□□□□□ -1.31
GTF3C2-206ENST00000454704 KRTAP4-16G5E9R7 235 aaPredicted RBP6.84□□□□□ -1.31
GTF3C2-206ENST00000454704 C20orf197Q8N268 126 aa6.84□□□□□ -1.31
GTF3C2-206ENST00000454704 FAT2Q9NYQ8 4349 aa6.84□□□□□ -1.31
GTF3C2-206ENST00000454704 SERTAD4-AS1Q5TG53 156 aa6.84□□□□□ -1.32
GTF3C2-206ENST00000454704 PKIGQ9Y2B9 76 aa6.84□□□□□ -1.32
GTF3C2-206ENST00000454704 LINC00588Q9Y4M8 146 aa6.84□□□□□ -1.32
GTF3C2-206ENST00000454704 DNAH2Q9P225 4427 aa6.83□□□□□ -1.32
GTF3C2-206ENST00000454704 FAM236DA0A1B0GTK5 79 aa6.83□□□□□ -1.32
GTF3C2-206ENST00000454704 FAM236CP0DP71 79 aa6.83□□□□□ -1.32
GTF3C2-206ENST00000454704 Q8N377 158 aa6.83□□□□□ -1.32
GTF3C2-206ENST00000454704 CYSTM1Q9H1C7 97 aa6.83□□□□□ -1.32
GTF3C2-206ENST00000454704 PKHD1P08F94 4074 aa6.83□□□□□ -1.32
GTF3C2-206ENST00000454704 BPY2O14599 106 aa6.82□□□□□ -1.32
GTF3C2-206ENST00000454704 TNP2Q05952 138 aa6.82□□□□□ -1.32
GTF3C2-206ENST00000454704 MRPL55Q7Z7F7 128 aaKnown RBP6.81□□□□□ -1.32
GTF3C2-206ENST00000454704 DNAH17Q9UFH2 4485 aa6.8□□□□□ -1.32
GTF3C2-206ENST00000454704 H7BZZ5 65 aa6.8□□□□□ -1.32
GTF3C2-206ENST00000454704 IGKV4-1P06312 121 aa6.8□□□□□ -1.32
GTF3C2-206ENST00000454704 FAM19A5Q7Z5A7 132 aaPredicted RBP6.8□□□□□ -1.32
GTF3C2-206ENST00000454704 Q8NBF4 154 aa6.8□□□□□ -1.32
GTF3C2-206ENST00000454704 SPRR4Q96PI1 79 aa6.8□□□□□ -1.32
GTF3C2-206ENST00000454704 SERP1Q9Y6X1 66 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms