RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PAM16Q9Y3D7 125 aa16.78■□□□□ 0.28
SMARCC1-203ENST00000454240 LINC00518Q8N0U6 118 aa16.77■□□□□ 0.28
SMARCC1-203ENST00000454240 DLEU1O43261 78 aa16.76■□□□□ 0.27
SMARCC1-203ENST00000454240 SPATA45Q537H7 98 aa16.76■□□□□ 0.27
SMARCC1-203ENST00000454240 VAMP8Q9BV40 100 aa16.76■□□□□ 0.27
SMARCC1-203ENST00000454240 PYY3Q5JQD4 70 aa16.75■□□□□ 0.27
SMARCC1-203ENST00000454240 ETDCA0A1B0GVM5 59 aa16.74■□□□□ 0.27
SMARCC1-203ENST00000454240 TRAV23DV6A0A075B6W5 121 aa16.73■□□□□ 0.27
SMARCC1-203ENST00000454240 OR13C6PQ8NH95 151 aa16.72■□□□□ 0.27
SMARCC1-203ENST00000454240 C14orf144Q96I85 54 aa16.72■□□□□ 0.27
SMARCC1-203ENST00000454240 PRR26Q8N8Z3 221 aa16.71■□□□□ 0.27
SMARCC1-203ENST00000454240 CBY1Q9Y3M2 126 aa16.71■□□□□ 0.27
SMARCC1-203ENST00000454240 B5MCH6 92 aa16.7■□□□□ 0.26
SMARCC1-203ENST00000454240 HIGD2AQ9BW72 106 aa16.7■□□□□ 0.26
SMARCC1-203ENST00000454240 ZNF73O43830 326 aaPredicted RBP16.68■□□□□ 0.26
SMARCC1-203ENST00000454240 Q6ZRX8 168 aa16.64■□□□□ 0.25
SMARCC1-203ENST00000454240 SMCR5Q8TEV8 140 aa16.64■□□□□ 0.25
SMARCC1-203ENST00000454240 SLC25A34Q6PIV7 304 aa16.63■□□□□ 0.25
SMARCC1-203ENST00000454240 ANAPC11Q9NYG5 84 aa16.62■□□□□ 0.25
SMARCC1-203ENST00000454240 RPL13AP40429 203 aaKnown RBP16.61■□□□□ 0.25
SMARCC1-203ENST00000454240 HIST1H4GQ99525 98 aa16.61■□□□□ 0.25
SMARCC1-203ENST00000454240 HIGD1BQ9P298 99 aa16.61■□□□□ 0.25
SMARCC1-203ENST00000454240 A0A087X002 238 aa16.6■□□□□ 0.25
SMARCC1-203ENST00000454240 Q9BRP9 147 aa16.6■□□□□ 0.25
SMARCC1-203ENST00000454240 A4D1N5 150 aa16.59■□□□□ 0.25
SMARCC1-203ENST00000454240 A6NDN8 102 aa16.59■□□□□ 0.25
SMARCC1-203ENST00000454240 TRAV13-2A0A0B4J235 113 aa16.58■□□□□ 0.24
SMARCC1-203ENST00000454240 CRYGAP11844 174 aa16.58■□□□□ 0.24
SMARCC1-203ENST00000454240 HINT1P49773 126 aaPredicted RBP16.58■□□□□ 0.24
SMARCC1-203ENST00000454240 FAM229BQ4G0N7 80 aa16.58■□□□□ 0.24
SMARCC1-203ENST00000454240 C2orf91Q6ZV80 131 aa16.58■□□□□ 0.24
SMARCC1-203ENST00000454240 SPRR4Q96PI1 79 aa16.58■□□□□ 0.24
SMARCC1-203ENST00000454240 ZNF706Q9Y5V0 76 aaPredicted RBP16.56■□□□□ 0.24
SMARCC1-203ENST00000454240 ERC2-IT1O76042 136 aa16.55■□□□□ 0.24
SMARCC1-203ENST00000454240 C6orf99Q4VX62 202 aa16.54■□□□□ 0.24
SMARCC1-203ENST00000454240 KRTAP13-2Q52LG2 175 aa16.52■□□□□ 0.24
SMARCC1-203ENST00000454240 ELOF1P60002 83 aaKnown RBP16.5■□□□□ 0.23
SMARCC1-203ENST00000454240 TRBV7-6A0A0J9YX20 115 aa16.49■□□□□ 0.23
SMARCC1-203ENST00000454240 COX7BP24311 80 aa16.48■□□□□ 0.23
SMARCC1-203ENST00000454240 TYMSOSQ8TAI1 123 aa16.48■□□□□ 0.23
SMARCC1-203ENST00000454240 SMIM11BQ8TCY0 68 aa16.48■□□□□ 0.23
SMARCC1-203ENST00000454240 TAL2Q16559 108 aa16.47■□□□□ 0.23
SMARCC1-203ENST00000454240 LINC00483Q53H64 154 aa16.46■□□□□ 0.23
SMARCC1-203ENST00000454240 C12orf57Q99622 126 aa16.45■□□□□ 0.22
SMARCC1-203ENST00000454240 DHRS4-AS1Q9P1J3 65 aa16.45■□□□□ 0.22
SMARCC1-203ENST00000454240 A0A1B0GWB2 263 aa16.43■□□□□ 0.22
SMARCC1-203ENST00000454240 GAGE2AQ6NT46 116 aa16.42■□□□□ 0.22
SMARCC1-203ENST00000454240 CEND1Q8N111 149 aa16.41■□□□□ 0.22
SMARCC1-203ENST00000454240 CFC1BP0CG36 223 aa16.4■□□□□ 0.22
SMARCC1-203ENST00000454240 CFC1P0CG37 223 aa16.4■□□□□ 0.22
SMARCC1-203ENST00000454240 C3orf22Q8N5N4 141 aa16.4■□□□□ 0.22
SMARCC1-203ENST00000454240 ST20-AS1Q8NBB2 130 aa16.39■□□□□ 0.21
SMARCC1-203ENST00000454240 UQCR10Q9UDW1 63 aa16.39■□□□□ 0.21
SMARCC1-203ENST00000454240 HMCN2Q8NDA2 5059 aa16.34■□□□□ 0.21
SMARCC1-203ENST00000454240 A0A0B4J2C4 111 aa16.34■□□□□ 0.21
SMARCC1-203ENST00000454240 FXYD2P54710 66 aa16.32■□□□□ 0.2
SMARCC1-203ENST00000454240 HSD52Q0P140 79 aa16.32■□□□□ 0.2
SMARCC1-203ENST00000454240 VAMP3Q15836 100 aa16.32■□□□□ 0.2
SMARCC1-203ENST00000454240 RAB37Q96AX2 223 aa16.32■□□□□ 0.2
SMARCC1-203ENST00000454240 TMEM238LA0A1B0GVL6 79 aa16.31■□□□□ 0.2
SMARCC1-203ENST00000454240 A6NJY4 79 aa16.31■□□□□ 0.2
SMARCC1-203ENST00000454240 SMIM6P0DI80 62 aa16.31■□□□□ 0.2
SMARCC1-203ENST00000454240 SPRR1BP22528 89 aa16.3■□□□□ 0.2
SMARCC1-203ENST00000454240 LOC105371267A0A1B0GV96 52 aa16.29■□□□□ 0.2
SMARCC1-203ENST00000454240 LINC00304Q8N9R0 145 aa16.29■□□□□ 0.2
SMARCC1-203ENST00000454240 NHP2Q9NX24 153 aaKnown RBP16.27■□□□□ 0.2
SMARCC1-203ENST00000454240 H7C2G1 150 aa16.25■□□□□ 0.19
SMARCC1-203ENST00000454240 LINC00575Q6W349 94 aa16.25■□□□□ 0.19
SMARCC1-203ENST00000454240 IGLV9-49A0A0B4J1Y8 123 aa16.24■□□□□ 0.19
SMARCC1-203ENST00000454240 TSPAN13O95857 204 aa16.24■□□□□ 0.19
SMARCC1-203ENST00000454240 PRO1933Q9H354 126 aa16.24■□□□□ 0.19
SMARCC1-203ENST00000454240 PRO1854Q9UHT4 67 aa16.24■□□□□ 0.19
SMARCC1-203ENST00000454240 BVES-AS1Q5T3Y7 98 aa16.23■□□□□ 0.19
SMARCC1-203ENST00000454240 SLC25A20O43772 301 aa16.22■□□□□ 0.19
SMARCC1-203ENST00000454240 MOBPQ13875 183 aa16.22■□□□□ 0.19
SMARCC1-203ENST00000454240 SSBP3-AS1Q7Z2R9 100 aa16.21■□□□□ 0.19
SMARCC1-203ENST00000454240 Q8NBF4 154 aa16.21■□□□□ 0.19
SMARCC1-203ENST00000454240 DEFB105AQ8NG35 78 aa16.21■□□□□ 0.19
SMARCC1-203ENST00000454240 IGLV5-48A0A075B6I7 105 aa16.2■□□□□ 0.18
SMARCC1-203ENST00000454240 TEX49A0A1B0GTD5 131 aa16.2■□□□□ 0.18
SMARCC1-203ENST00000454240 LINC01547P58512 204 aaPredicted RBP16.2■□□□□ 0.18
SMARCC1-203ENST00000454240 CTAG1AP78358 180 aa16.2■□□□□ 0.18
SMARCC1-203ENST00000454240 SPAG11AQ6PDA7 123 aa16.18■□□□□ 0.18
SMARCC1-203ENST00000454240 hADV29S1A0JD25 119 aa16.17■□□□□ 0.18
SMARCC1-203ENST00000454240 LAMTOR3Q9UHA4 124 aa16.15■□□□□ 0.18
SMARCC1-203ENST00000454240 Q1RN00 199 aa16.14■□□□□ 0.17
SMARCC1-203ENST00000454240 C9orf153Q5TBE3 101 aa16.14■□□□□ 0.17
SMARCC1-203ENST00000454240 C4orf48Q5BLP8 95 aa16.13■□□□□ 0.17
SMARCC1-203ENST00000454240 SMIM29Q86T20 159 aa16.13■□□□□ 0.17
SMARCC1-203ENST00000454240 Q8N377 158 aa16.12■□□□□ 0.17
SMARCC1-203ENST00000454240 H0YGX0 51 aa16.11■□□□□ 0.17
SMARCC1-203ENST00000454240 K7ERJ3 54 aa16.1■□□□□ 0.17
SMARCC1-203ENST00000454240 Q6ZQY7 126 aa16.1■□□□□ 0.17
SMARCC1-203ENST00000454240 SPINK1P00995 79 aa16.07■□□□□ 0.16
SMARCC1-203ENST00000454240 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.07■□□□□ 0.16
SMARCC1-203ENST00000454240 TRIAP1O43715 76 aa16.04■□□□□ 0.16
SMARCC1-203ENST00000454240 FAM218AQ96MZ4 157 aa16.04■□□□□ 0.16
SMARCC1-203ENST00000454240 PRR4Q16378 134 aa16.02■□□□□ 0.16
SMARCC1-203ENST00000454240 TSTD3H0UI37 97 aa16.01■□□□□ 0.15
SMARCC1-203ENST00000454240 SNCGO76070 127 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms