RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 NKAPP1Q8N9T2 125 aa11.75□□□□□ -0.53
MECP2-205ENST00000453960 COL7A1Q02388 2944 aa11.75□□□□□ -0.53
MECP2-205ENST00000453960 KRTAP4-16G5E9R7 235 aaPredicted RBP11.74□□□□□ -0.53
MECP2-205ENST00000453960 SPRR1AP35321 89 aa11.74□□□□□ -0.53
MECP2-205ENST00000453960 KRTAP7-1Q8IUC3 87 aa11.74□□□□□ -0.53
MECP2-205ENST00000453960 DSCR8Q96T75 97 aa11.74□□□□□ -0.53
MECP2-205ENST00000453960 IGKV3D-7A0A0C4DH55 119 aa11.73□□□□□ -0.53
MECP2-205ENST00000453960 PRYO14603 147 aa11.72□□□□□ -0.53
MECP2-205ENST00000453960 DNAH10Q8IVF4 4471 aa11.72□□□□□ -0.53
MECP2-205ENST00000453960 IGLV1-50A0A075B6I6 118 aa11.72□□□□□ -0.53
MECP2-205ENST00000453960 APLNQ9ULZ1 77 aa11.72□□□□□ -0.53
MECP2-205ENST00000453960 STAB2Q8WWQ8 2551 aa11.71□□□□□ -0.53
MECP2-205ENST00000453960 B9D2Q9BPU9 175 aa11.71□□□□□ -0.54
MECP2-205ENST00000453960 LOC107984640A0A0U1RRK4 108 aa11.7□□□□□ -0.54
MECP2-205ENST00000453960 M0R2N4 97 aa11.7□□□□□ -0.54
MECP2-205ENST00000453960 KRTAP1-5Q9BYS1 174 aa11.7□□□□□ -0.54
MECP2-205ENST00000453960 UBL5Q9BZL1 73 aa11.7□□□□□ -0.54
MECP2-205ENST00000453960 ATOX1O00244 68 aa11.69□□□□□ -0.54
MECP2-205ENST00000453960 FAM168BA1KXE4 195 aa11.67□□□□□ -0.54
MECP2-205ENST00000453960 CNBPP62633 177 aaKnown RBP11.67□□□□□ -0.54
MECP2-205ENST00000453960 B5MCH6 92 aa11.66□□□□□ -0.54
MECP2-205ENST00000453960 Q6ZRX8 168 aa11.66□□□□□ -0.54
MECP2-205ENST00000453960 LINC01547P58512 204 aaPredicted RBP11.66□□□□□ -0.54
MECP2-205ENST00000453960 DHRS4-AS1Q9P1J3 65 aa11.66□□□□□ -0.54
MECP2-205ENST00000453960 PLECQ15149 4684 aaKnown RBP11.66□□□□□ -0.54
MECP2-205ENST00000453960 TGP01266 2768 aa11.64□□□□□ -0.55
MECP2-205ENST00000453960 LYSTQ99698 3801 aa11.64□□□□□ -0.55
MECP2-205ENST00000453960 UQCRQO14949 82 aa11.63□□□□□ -0.55
MECP2-205ENST00000453960 Q6ZVQ6 151 aa11.63□□□□□ -0.55
MECP2-205ENST00000453960 MRPL55Q7Z7F7 128 aaKnown RBP11.63□□□□□ -0.55
MECP2-205ENST00000453960 Q8N377 158 aa11.63□□□□□ -0.55
MECP2-205ENST00000453960 C3orf22Q8N5N4 141 aa11.63□□□□□ -0.55
MECP2-205ENST00000453960 Q9BRP9 147 aa11.63□□□□□ -0.55
MECP2-205ENST00000453960 VPS13DQ5THJ4 4388 aa11.62□□□□□ -0.55
MECP2-205ENST00000453960 A0A087WVE0 104 aa11.62□□□□□ -0.55
MECP2-205ENST00000453960 IGLV5-48A0A075B6I7 105 aa11.61□□□□□ -0.55
MECP2-205ENST00000453960 COX7CP15954 63 aa11.61□□□□□ -0.55
MECP2-205ENST00000453960 DNAH7Q8WXX0 4024 aa11.6□□□□□ -0.55
MECP2-205ENST00000453960 RPL37AP8A6NKH3 93 aa11.6□□□□□ -0.55
MECP2-205ENST00000453960 CXCL6P80162 114 aa11.6□□□□□ -0.55
MECP2-205ENST00000453960 CSMD3Q7Z407 3707 aa11.59□□□□□ -0.55
MECP2-205ENST00000453960 C16orf90A8MZG2 172 aa11.59□□□□□ -0.55
MECP2-205ENST00000453960 PRKDCP78527 4128 aaKnown RBP11.58□□□□□ -0.56
MECP2-205ENST00000453960 ETDCA0A1B0GVM5 59 aa11.57□□□□□ -0.56
MECP2-205ENST00000453960 TNP2Q05952 138 aa11.57□□□□□ -0.56
MECP2-205ENST00000453960 FAM19A1Q7Z5A9 133 aa11.57□□□□□ -0.56
MECP2-205ENST00000453960 C14orf177Q52M58 125 aa11.57□□□□□ -0.56
MECP2-205ENST00000453960 FAM19A5Q7Z5A7 132 aaPredicted RBP11.56□□□□□ -0.56
MECP2-205ENST00000453960 UBE2DNLQ8IWF7 75 aa11.56□□□□□ -0.56
MECP2-205ENST00000453960 A0A096LNI7 61 aa11.55□□□□□ -0.56
MECP2-205ENST00000453960 A0A1B0GW54 56 aa11.55□□□□□ -0.56
MECP2-205ENST00000453960 BCE1O60756 84 aa11.55□□□□□ -0.56
MECP2-205ENST00000453960 SERP2Q8N6R1 65 aa11.55□□□□□ -0.56
MECP2-205ENST00000453960 CRYGAP11844 174 aa11.54□□□□□ -0.56
MECP2-205ENST00000453960 REG3GQ6UW15 175 aa11.53□□□□□ -0.56
MECP2-205ENST00000453960 NUPR2A6NF83 97 aa11.52□□□□□ -0.56
MECP2-205ENST00000453960 LRCOL1A6NCL2 159 aa11.51□□□□□ -0.57
MECP2-205ENST00000453960 PSCAO43653 123 aa11.51□□□□□ -0.57
MECP2-205ENST00000453960 C9orf153Q5TBE3 101 aa11.51□□□□□ -0.57
MECP2-205ENST00000453960 A0A1W2PNN7 141 aa11.5□□□□□ -0.57
MECP2-205ENST00000453960 SS18L2Q9UHA2 77 aa11.5□□□□□ -0.57
MECP2-205ENST00000453960 ERC2-IT1O76042 136 aa11.49□□□□□ -0.57
MECP2-205ENST00000453960 HAMPP81172 84 aa11.49□□□□□ -0.57
MECP2-205ENST00000453960 Q6ZRN7 208 aaPredicted RBP11.49□□□□□ -0.57
MECP2-205ENST00000453960 NBDYA0A0U1RRE5 68 aa11.49□□□□□ -0.57
MECP2-205ENST00000453960 DEFB105AQ8NG35 78 aa11.48□□□□□ -0.57
MECP2-205ENST00000453960 C9orf163Q8N9P6 203 aa11.47□□□□□ -0.57
MECP2-205ENST00000453960 ST20-AS1Q8NBB2 130 aa11.47□□□□□ -0.57
MECP2-205ENST00000453960 STARD9Q9P2P6 4700 aa11.46□□□□□ -0.58
MECP2-205ENST00000453960 PKIGQ9Y2B9 76 aa11.46□□□□□ -0.58
MECP2-205ENST00000453960 SMIM29Q86T20 159 aa11.45□□□□□ -0.58
MECP2-205ENST00000453960 A0A1W2PNM2 257 aa11.43□□□□□ -0.58
MECP2-205ENST00000453960 UBE2BP63146 152 aa11.43□□□□□ -0.58
MECP2-205ENST00000453960 SPRR4Q96PI1 79 aa11.43□□□□□ -0.58
MECP2-205ENST00000453960 TENM2Q9NT68 2774 aa11.43□□□□□ -0.58
MECP2-205ENST00000453960 IGKV2-24A0A0C4DH68 120 aa11.43□□□□□ -0.58
MECP2-205ENST00000453960 Q8NBF4 154 aa11.42□□□□□ -0.58
MECP2-205ENST00000453960 H0Y9J4 135 aa11.41□□□□□ -0.58
MECP2-205ENST00000453960 C1orf137Q5JT78 98 aa11.41□□□□□ -0.58
MECP2-205ENST00000453960 DNAH17Q9UFH2 4485 aa11.4□□□□□ -0.58
MECP2-205ENST00000453960 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.4□□□□□ -0.58
MECP2-205ENST00000453960 NREPQ16612 68 aa11.4□□□□□ -0.58
MECP2-205ENST00000453960 SMIM20Q8N5G0 67 aa11.4□□□□□ -0.58
MECP2-205ENST00000453960 IGLV8-61A0A075B6I0 122 aa11.39□□□□□ -0.59
MECP2-205ENST00000453960 EPM2AB3EWF7 344 aa11.39□□□□□ -0.59
MECP2-205ENST00000453960 FUSP35637 526 aaKnown RBP eCLIP11.39□□□□□ -0.59
MECP2-205ENST00000453960 TRAV7A0A075B6U4 112 aa11.38□□□□□ -0.59
MECP2-205ENST00000453960 LINC00474Q9P2X8 69 aa11.37□□□□□ -0.59
MECP2-205ENST00000453960 IGKV4-1P06312 121 aa11.36□□□□□ -0.59
MECP2-205ENST00000453960 CHTF8P0CG12 524 aa11.36□□□□□ -0.59
MECP2-205ENST00000453960 SCXQ7RTU7 201 aa11.36□□□□□ -0.59
MECP2-205ENST00000453960 KRTAP11-1Q8IUC1 163 aa11.36□□□□□ -0.59
MECP2-205ENST00000453960 CYSTM1Q9H1C7 97 aa11.36□□□□□ -0.59
MECP2-205ENST00000453960 C3orf84H3BNL1 204 aa11.35□□□□□ -0.59
MECP2-205ENST00000453960 SPRR1BP22528 89 aa11.35□□□□□ -0.59
MECP2-205ENST00000453960 PHF5AQ7RTV0 110 aaKnown RBP11.35□□□□□ -0.59
MECP2-205ENST00000453960 PRLHP81277 87 aa11.34□□□□□ -0.59
MECP2-205ENST00000453960 DNAH2Q9P225 4427 aa11.34□□□□□ -0.59
MECP2-205ENST00000453960 DNAH6Q9C0G6 4158 aa11.33□□□□□ -0.6
MECP2-205ENST00000453960 HECTD4Q9Y4D8 3996 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms