RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TRAV7A0A075B6U4 112 aa10.49□□□□□ -0.73
SNX17-204ENST00000453453 KRTAP26-1Q6PEX3 210 aa10.49□□□□□ -0.73
SNX17-204ENST00000453453 KIAA0087Q14695 138 aa10.48□□□□□ -0.73
SNX17-204ENST00000453453 LINC00575Q6W349 94 aa10.48□□□□□ -0.73
SNX17-204ENST00000453453 Q6ZQT0 140 aa10.47□□□□□ -0.73
SNX17-204ENST00000453453 PSCAO43653 123 aa10.47□□□□□ -0.73
SNX17-204ENST00000453453 EPM2AB3EWF7 344 aa10.46□□□□□ -0.74
SNX17-204ENST00000453453 RBM3P98179 157 aaKnown RBP10.46□□□□□ -0.74
SNX17-204ENST00000453453 M0R2N4 97 aa10.45□□□□□ -0.74
SNX17-204ENST00000453453 VPS13DQ5THJ4 4388 aa10.45□□□□□ -0.74
SNX17-204ENST00000453453 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
SNX17-204ENST00000453453 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
SNX17-204ENST00000453453 CXCL6P80162 114 aa10.44□□□□□ -0.74
SNX17-204ENST00000453453 SPAG11BQ08648 103 aa10.44□□□□□ -0.74
SNX17-204ENST00000453453 DSCR8Q96T75 97 aa10.44□□□□□ -0.74
SNX17-204ENST00000453453 LYSTQ99698 3801 aa10.43□□□□□ -0.74
SNX17-204ENST00000453453 TRAV23DV6A0A075B6W5 121 aa10.43□□□□□ -0.74
SNX17-204ENST00000453453 OXTP01178 125 aa10.43□□□□□ -0.74
SNX17-204ENST00000453453 C6orf99Q4VX62 202 aa10.43□□□□□ -0.74
SNX17-204ENST00000453453 FAM19A1Q7Z5A9 133 aa10.43□□□□□ -0.74
SNX17-204ENST00000453453 SERP1Q9Y6X1 66 aa10.43□□□□□ -0.74
SNX17-204ENST00000453453 KLKP1Q107X0 134 aa10.42□□□□□ -0.74
SNX17-204ENST00000453453 Q6ZR54 194 aa10.42□□□□□ -0.74
SNX17-204ENST00000453453 ALMS1Q8TCU4 4167 aa10.42□□□□□ -0.74
SNX17-204ENST00000453453 DNAH1Q9P2D7 4330 aa10.41□□□□□ -0.74
SNX17-204ENST00000453453 Q5XG85 94 aa10.4□□□□□ -0.74
SNX17-204ENST00000453453 C15orf56Q8N910 161 aa10.4□□□□□ -0.74
SNX17-204ENST00000453453 GVQW2A0A096LPI5 108 aaPredicted RBP10.4□□□□□ -0.75
SNX17-204ENST00000453453 IGLV6-57P01721 117 aa10.4□□□□□ -0.75
SNX17-204ENST00000453453 HIGD2BQ4VC39 106 aa10.4□□□□□ -0.75
SNX17-204ENST00000453453 NDUFC1O43677 76 aa10.39□□□□□ -0.75
SNX17-204ENST00000453453 ATP5EP56381 51 aaPredicted RBP10.39□□□□□ -0.75
SNX17-204ENST00000453453 F8WDY8 70 aa10.38□□□□□ -0.75
SNX17-204ENST00000453453 LINC01547P58512 204 aaPredicted RBP10.38□□□□□ -0.75
SNX17-204ENST00000453453 C20orf197Q8N268 126 aa10.38□□□□□ -0.75
SNX17-204ENST00000453453 TRBV7-6A0A0J9YX20 115 aa10.37□□□□□ -0.75
SNX17-204ENST00000453453 C14orf177Q52M58 125 aa10.37□□□□□ -0.75
SNX17-204ENST00000453453 C1orf134Q5TEV5 83 aa10.37□□□□□ -0.75
SNX17-204ENST00000453453 Q6ZVQ6 151 aa10.37□□□□□ -0.75
SNX17-204ENST00000453453 H7BZZ5 65 aa10.36□□□□□ -0.75
SNX17-204ENST00000453453 PRR3P79522 188 aaKnown RBP10.36□□□□□ -0.75
SNX17-204ENST00000453453 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.36□□□□□ -0.75
SNX17-204ENST00000453453 CAMK2N2Q96S95 79 aa10.36□□□□□ -0.75
SNX17-204ENST00000453453 LAMTOR3Q9UHA4 124 aa10.36□□□□□ -0.75
SNX17-204ENST00000453453 Q6ZRN7 208 aaPredicted RBP10.35□□□□□ -0.75
SNX17-204ENST00000453453 ERC2-IT1O76042 136 aa10.33□□□□□ -0.76
SNX17-204ENST00000453453 LCE6AA0A183 80 aa10.33□□□□□ -0.76
SNX17-204ENST00000453453 SYCNQ0VAF6 134 aa10.33□□□□□ -0.76
SNX17-204ENST00000453453 UNQ6190/PRO20217Q6UXQ8 127 aa10.33□□□□□ -0.76
SNX17-204ENST00000453453 DNAH6Q9C0G6 4158 aa10.32□□□□□ -0.76
SNX17-204ENST00000453453 TRBV7-4A0A0J9YYF1 115 aa10.32□□□□□ -0.76
SNX17-204ENST00000453453 DIRC1Q969H9 104 aa10.32□□□□□ -0.76
SNX17-204ENST00000453453 Q8NDZ9 215 aa10.31□□□□□ -0.76
SNX17-204ENST00000453453 C4orf26Q17RF5 130 aa10.3□□□□□ -0.76
SNX17-204ENST00000453453 C10orf25Q5T742 122 aa10.3□□□□□ -0.76
SNX17-204ENST00000453453 Q6ZQY7 126 aa10.29□□□□□ -0.76
SNX17-204ENST00000453453 Q6ZRU5 148 aa10.29□□□□□ -0.76
SNX17-204ENST00000453453 SMIM26A0A096LP01 95 aa10.29□□□□□ -0.76
SNX17-204ENST00000453453 LRCOL1A6NCL2 159 aa10.29□□□□□ -0.76
SNX17-204ENST00000453453 HAMPP81172 84 aa10.29□□□□□ -0.76
SNX17-204ENST00000453453 C9orf116Q5BN46 136 aaPredicted RBP10.28□□□□□ -0.76
SNX17-204ENST00000453453 HRCT1Q6UXD1 115 aa10.28□□□□□ -0.76
SNX17-204ENST00000453453 C6orf48Q9UBA6 75 aa10.28□□□□□ -0.76
SNX17-204ENST00000453453 COX7BP24311 80 aa10.27□□□□□ -0.77
SNX17-204ENST00000453453 A0A087WTM6 91 aa10.25□□□□□ -0.77
SNX17-204ENST00000453453 ELOF1P60002 83 aaKnown RBP10.25□□□□□ -0.77
SNX17-204ENST00000453453 CNBPP62633 177 aaKnown RBP10.25□□□□□ -0.77
SNX17-204ENST00000453453 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.24□□□□□ -0.77
SNX17-204ENST00000453453 ZNF73O43830 326 aaPredicted RBP10.23□□□□□ -0.77
SNX17-204ENST00000453453 KMT2AQ03164 3969 aa10.23□□□□□ -0.77
SNX17-204ENST00000453453 PKIGQ9Y2B9 76 aa10.22□□□□□ -0.77
SNX17-204ENST00000453453 DNAH10Q8IVF4 4471 aa10.21□□□□□ -0.77
SNX17-204ENST00000453453 F8WEM9 126 aa10.21□□□□□ -0.78
SNX17-204ENST00000453453 A0A1B0GW54 56 aa10.2□□□□□ -0.78
SNX17-204ENST00000453453 RTL8CO15255 209 aa10.2□□□□□ -0.78
SNX17-204ENST00000453453 TLX1NBP0CAT3 122 aa10.2□□□□□ -0.78
SNX17-204ENST00000453453 PRO0628Q9UI54 55 aa10.2□□□□□ -0.78
SNX17-204ENST00000453453 M0R378 163 aa10.19□□□□□ -0.78
SNX17-204ENST00000453453 NREPQ16612 68 aa10.19□□□□□ -0.78
SNX17-204ENST00000453453 TNP2Q05952 138 aa10.18□□□□□ -0.78
SNX17-204ENST00000453453 VPREB1P12018 145 aa10.17□□□□□ -0.78
SNX17-204ENST00000453453 DNAH2Q9P225 4427 aa10.17□□□□□ -0.78
SNX17-204ENST00000453453 Q6ZRP5 223 aa10.16□□□□□ -0.78
SNX17-204ENST00000453453 LINC00528Q8N1L1 170 aa10.16□□□□□ -0.78
SNX17-204ENST00000453453 C9orf163Q8N9P6 203 aa10.16□□□□□ -0.78
SNX17-204ENST00000453453 SNURFQ9Y675 71 aa10.16□□□□□ -0.78
SNX17-204ENST00000453453 BPY2O14599 106 aa10.15□□□□□ -0.78
SNX17-204ENST00000453453 TMEM254Q8TBM7 123 aa10.15□□□□□ -0.78
SNX17-204ENST00000453453 XAGE1AQ9HD64 81 aa10.15□□□□□ -0.79
SNX17-204ENST00000453453 IGLV5-52A0A0A0MRZ9 124 aa10.14□□□□□ -0.79
SNX17-204ENST00000453453 LINC00336Q6ZUF6 198 aa10.14□□□□□ -0.79
SNX17-204ENST00000453453 SACSQ9NZJ4 4579 aa10.14□□□□□ -0.79
SNX17-204ENST00000453453 IGKV4-1P06312 121 aa10.12□□□□□ -0.79
SNX17-204ENST00000453453 FP248Q71RG6 208 aaPredicted RBP10.12□□□□□ -0.79
SNX17-204ENST00000453453 DNAH17Q9UFH2 4485 aa10.12□□□□□ -0.79
SNX17-204ENST00000453453 A0A0U1RQV1 116 aa10.11□□□□□ -0.79
SNX17-204ENST00000453453 C16orf90A8MZG2 172 aa10.11□□□□□ -0.79
SNX17-204ENST00000453453 OCR1Q9BZK8 76 aa10.11□□□□□ -0.79
SNX17-204ENST00000453453 PRYO14603 147 aa10.1□□□□□ -0.79
SNX17-204ENST00000453453 LINC00474Q9P2X8 69 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms