RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 HYDINQ4G0P3 5121 aa9.07□□□□□ -0.96
USP39-207ENST00000450066 ELOF1P60002 83 aaKnown RBP9.06□□□□□ -0.96
USP39-207ENST00000450066 A0A1W2PNN7 141 aa9.06□□□□□ -0.96
USP39-207ENST00000450066 BAALC-AS2P0C853 105 aa9.06□□□□□ -0.96
USP39-207ENST00000450066 CHTF8P0CG12 524 aa9.06□□□□□ -0.96
USP39-207ENST00000450066 COX7BP24311 80 aa9.06□□□□□ -0.96
USP39-207ENST00000450066 RPL37AP8A6NKH3 93 aa9.05□□□□□ -0.96
USP39-207ENST00000450066 RTL8CO15255 209 aa9.05□□□□□ -0.96
USP39-207ENST00000450066 hADV29S1A0JD25 119 aa9.04□□□□□ -0.96
USP39-207ENST00000450066 K7ERU9 68 aa9.04□□□□□ -0.96
USP39-207ENST00000450066 PRYO14603 147 aa9.04□□□□□ -0.96
USP39-207ENST00000450066 TNP2Q05952 138 aa9.03□□□□□ -0.96
USP39-207ENST00000450066 PPDPFLQ8WWR9 84 aa9.03□□□□□ -0.96
USP39-207ENST00000450066 ORMDL1Q9P0S3 153 aa9.03□□□□□ -0.96
USP39-207ENST00000450066 SPRR1AP35321 89 aa9.02□□□□□ -0.97
USP39-207ENST00000450066 LINC00528Q8N1L1 170 aa9.02□□□□□ -0.97
USP39-207ENST00000450066 IGLV5-52A0A0A0MRZ9 124 aa9.01□□□□□ -0.97
USP39-207ENST00000450066 TEX49A0A1B0GTD5 131 aa9□□□□□ -0.97
USP39-207ENST00000450066 KRTAP4-16G5E9R7 235 aaPredicted RBP9□□□□□ -0.97
USP39-207ENST00000450066 PANO1I0J062 215 aa9□□□□□ -0.97
USP39-207ENST00000450066 FUSP35637 526 aaKnown RBP eCLIP9□□□□□ -0.97
USP39-207ENST00000450066 SPACA4Q8TDM5 124 aa9□□□□□ -0.97
USP39-207ENST00000450066 J3QR89 54 aa9□□□□□ -0.97
USP39-207ENST00000450066 SACSQ9NZJ4 4579 aa8.99□□□□□ -0.97
USP39-207ENST00000450066 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
USP39-207ENST00000450066 FAT2Q9NYQ8 4349 aa8.98□□□□□ -0.97
USP39-207ENST00000450066 ETDCA0A1B0GVM5 59 aa8.98□□□□□ -0.97
USP39-207ENST00000450066 EPM2AB3EWF7 344 aa8.98□□□□□ -0.97
USP39-207ENST00000450066 B5MCH6 92 aa8.98□□□□□ -0.97
USP39-207ENST00000450066 TMEM256-PLSCR3K7ERE1 68 aa8.98□□□□□ -0.97
USP39-207ENST00000450066 INAFM2P0DMQ5 153 aa8.98□□□□□ -0.97
USP39-207ENST00000450066 REG3GQ6UW15 175 aa8.98□□□□□ -0.97
USP39-207ENST00000450066 DPH3Q96FX2 82 aa8.98□□□□□ -0.97
USP39-207ENST00000450066 DNAH11Q96DT5 4516 aa8.98□□□□□ -0.97
USP39-207ENST00000450066 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.97□□□□□ -0.97
USP39-207ENST00000450066 Q6ZQY7 126 aa8.97□□□□□ -0.97
USP39-207ENST00000450066 Q6ZRX8 168 aa8.97□□□□□ -0.97
USP39-207ENST00000450066 LCE6AA0A183 80 aa8.96□□□□□ -0.97
USP39-207ENST00000450066 PHF5AQ7RTV0 110 aaKnown RBP8.96□□□□□ -0.97
USP39-207ENST00000450066 H3BQ85 93 aa8.95□□□□□ -0.98
USP39-207ENST00000450066 DHRS4-AS1Q9P1J3 65 aa8.95□□□□□ -0.98
USP39-207ENST00000450066 GHRHP01286 108 aa8.94□□□□□ -0.98
USP39-207ENST00000450066 UBE2BP63146 152 aa8.94□□□□□ -0.98
USP39-207ENST00000450066 PKD1P98161 4303 aa8.94□□□□□ -0.98
USP39-207ENST00000450066 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
USP39-207ENST00000450066 OBSCN-AS1Q96MR7 158 aa8.93□□□□□ -0.98
USP39-207ENST00000450066 Q9BRP9 147 aa8.93□□□□□ -0.98
USP39-207ENST00000450066 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
USP39-207ENST00000450066 KRTAP11-1Q8IUC1 163 aa8.92□□□□□ -0.98
USP39-207ENST00000450066 PLAC8Q9NZF1 115 aa8.91□□□□□ -0.98
USP39-207ENST00000450066 JMJD7-PLA2G4BH0Y9G9 81 aa8.89□□□□□ -0.99
USP39-207ENST00000450066 FAM19A1Q7Z5A9 133 aa8.89□□□□□ -0.99
USP39-207ENST00000450066 H0Y9J4 135 aa8.87□□□□□ -0.99
USP39-207ENST00000450066 SMCR5Q8TEV8 140 aa8.87□□□□□ -0.99
USP39-207ENST00000450066 DNAH8Q96JB1 4490 aa8.86□□□□□ -0.99
USP39-207ENST00000450066 PRLHP81277 87 aa8.86□□□□□ -0.99
USP39-207ENST00000450066 C14orf132Q9NPU4 83 aa8.86□□□□□ -0.99
USP39-207ENST00000450066 LAMTOR3Q9UHA4 124 aa8.86□□□□□ -0.99
USP39-207ENST00000450066 ERC2-IT1O76042 136 aa8.85□□□□□ -0.99
USP39-207ENST00000450066 LINC00336Q6ZUF6 198 aa8.85□□□□□ -0.99
USP39-207ENST00000450066 VPS25Q9BRG1 176 aa8.85□□□□□ -0.99
USP39-207ENST00000450066 RYR2Q92736 4967 aa8.85□□□□□ -0.99
USP39-207ENST00000450066 BCE1O60756 84 aa8.85□□□□□ -0.99
USP39-207ENST00000450066 KMT2CQ8NEZ4 4911 aaKnown RBP8.85□□□□□ -0.99
USP39-207ENST00000450066 A0A1B0GV72 72 aa8.84□□□□□ -0.99
USP39-207ENST00000450066 FAM240AA0A1B0GVK7 77 aa8.84□□□□□ -0.99
USP39-207ENST00000450066 LINC01547P58512 204 aaPredicted RBP8.84□□□□□ -0.99
USP39-207ENST00000450066 IGLV5-48A0A075B6I7 105 aa8.84□□□□□ -0.99
USP39-207ENST00000450066 Q8N377 158 aa8.84□□□□□ -0.99
USP39-207ENST00000450066 NDUFV3P56181 108 aaKnown RBP8.83□□□□□ -1
USP39-207ENST00000450066 RBM3P98179 157 aaKnown RBP8.83□□□□□ -1
USP39-207ENST00000450066 DEFB105AQ8NG35 78 aa8.83□□□□□ -1
USP39-207ENST00000450066 Q6ZSA8 131 aa8.82□□□□□ -1
USP39-207ENST00000450066 ST20-AS1Q8NBB2 130 aa8.82□□□□□ -1
USP39-207ENST00000450066 FAM30AQ9NZY2 134 aa8.82□□□□□ -1
USP39-207ENST00000450066 UBE2AP49459 152 aa8.82□□□□□ -1
USP39-207ENST00000450066 KRTAP10-1P60331 282 aa8.82□□□□□ -1
USP39-207ENST00000450066 HIGD2AQ9BW72 106 aa8.82□□□□□ -1
USP39-207ENST00000450066 ACYP1P07311 99 aa8.81□□□□□ -1
USP39-207ENST00000450066 KRTAP13-1Q8IUC0 172 aa8.81□□□□□ -1
USP39-207ENST00000450066 CDIP1Q9H305 208 aa8.81□□□□□ -1
USP39-207ENST00000450066 SRRM2Q9UQ35 2752 aaKnown RBP8.8□□□□□ -1
USP39-207ENST00000450066 GAGE2AQ6NT46 116 aa8.8□□□□□ -1
USP39-207ENST00000450066 CIRBP-AS1Q8TBR5 109 aa8.79□□□□□ -1
USP39-207ENST00000450066 PSORS1C2Q9UIG4 136 aa8.79□□□□□ -1
USP39-207ENST00000450066 LOC110117498A0A087WWA1 95 aa8.79□□□□□ -1
USP39-207ENST00000450066 CCKP06307 115 aa8.79□□□□□ -1
USP39-207ENST00000450066 DSCR8Q96T75 97 aa8.79□□□□□ -1
USP39-207ENST00000450066 PKHD1P08F94 4074 aa8.78□□□□□ -1
USP39-207ENST00000450066 PDE6GP18545 87 aa8.77□□□□□ -1
USP39-207ENST00000450066 SCXQ7RTU7 201 aa8.77□□□□□ -1.01
USP39-207ENST00000450066 TRBV7-4A0A0J9YYF1 115 aa8.76□□□□□ -1.01
USP39-207ENST00000450066 Q6ZQT0 140 aa8.76□□□□□ -1.01
USP39-207ENST00000450066 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
USP39-207ENST00000450066 C3orf22Q8N5N4 141 aa8.74□□□□□ -1.01
USP39-207ENST00000450066 A0A1B0GVY2 172 aa8.74□□□□□ -1.01
USP39-207ENST00000450066 SMIM29Q86T20 159 aa8.73□□□□□ -1.01
USP39-207ENST00000450066 SPRR1BP22528 89 aa8.72□□□□□ -1.01
USP39-207ENST00000450066 C21orf62-AS1Q17RA5 79 aa8.72□□□□□ -1.01
USP39-207ENST00000450066 ZNF861PO60384 105 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms