RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 EPG5Q9HCE0 2579 aa5.15□□□□□ -1.59
NEDD9-204ENST00000448183 A0A0C4DFX4 3053 aa5.13□□□□□ -1.59
NEDD9-204ENST00000448183 KRTAP24-1Q3LI83 254 aa5.13□□□□□ -1.59
NEDD9-204ENST00000448183 MGAM2Q2M2H8 2515 aa5.13□□□□□ -1.59
NEDD9-204ENST00000448183 SSBP3-AS1Q7Z2R9 100 aa5.13□□□□□ -1.59
NEDD9-204ENST00000448183 CD164Q04900 197 aa5.13□□□□□ -1.59
NEDD9-204ENST00000448183 C15orf56Q8N910 161 aa5.12□□□□□ -1.59
NEDD9-204ENST00000448183 MIR22HGQ0VDD5 57 aa5.12□□□□□ -1.59
NEDD9-204ENST00000448183 PRRC2CQ9Y520 2896 aaKnown RBP5.12□□□□□ -1.59
NEDD9-204ENST00000448183 A0A1B0GVX0 72 aa5.12□□□□□ -1.59
NEDD9-204ENST00000448183 C9orf129Q5T035 196 aaKnown RBP5.11□□□□□ -1.59
NEDD9-204ENST00000448183 PCSK5Q92824 1860 aa5.1□□□□□ -1.59
NEDD9-204ENST00000448183 GIG44P09565 113 aaPredicted RBP5.1□□□□□ -1.59
NEDD9-204ENST00000448183 LINC00612Q8N6U2 182 aa5.1□□□□□ -1.59
NEDD9-204ENST00000448183 PLA2G2DQ9UNK4 145 aa5.09□□□□□ -1.59
NEDD9-204ENST00000448183 PLA2G1BP04054 148 aaKnown RBP5.09□□□□□ -1.59
NEDD9-204ENST00000448183 TLX1NBP0CAT3 122 aa5.09□□□□□ -1.59
NEDD9-204ENST00000448183 DSCR10P59022 87 aa5.09□□□□□ -1.59
NEDD9-204ENST00000448183 FLNBO75369 2602 aaKnown RBP5.09□□□□□ -1.59
NEDD9-204ENST00000448183 KTN1-AS1Q86SY8 53 aa5.09□□□□□ -1.59
NEDD9-204ENST00000448183 A0A0G2JQZ4 141 aa5.08□□□□□ -1.6
NEDD9-204ENST00000448183 A0A1W2PNN7 141 aa5.08□□□□□ -1.6
NEDD9-204ENST00000448183 C19orf73Q9NVV2 129 aa5.08□□□□□ -1.6
NEDD9-204ENST00000448183 A0A1W2PNM2 257 aa5.08□□□□□ -1.6
NEDD9-204ENST00000448183 SPANXA2-OT1Q8N9U9 137 aa5.08□□□□□ -1.6
NEDD9-204ENST00000448183 ZNF861PO60384 105 aa5.08□□□□□ -1.6
NEDD9-204ENST00000448183 LCA10Q71F78 164 aa5.07□□□□□ -1.6
NEDD9-204ENST00000448183 CRIPTQ9P021 101 aa5.07□□□□□ -1.6
NEDD9-204ENST00000448183 OBSCN-AS1Q96MR7 158 aa5.06□□□□□ -1.6
NEDD9-204ENST00000448183 PCNTO95613 3336 aa5.06□□□□□ -1.6
NEDD9-204ENST00000448183 ATRQ13535 2644 aa5.06□□□□□ -1.6
NEDD9-204ENST00000448183 C9orf163Q8N9P6 203 aa5.05□□□□□ -1.6
NEDD9-204ENST00000448183 BPTFQ12830 3046 aa5.05□□□□□ -1.6
NEDD9-204ENST00000448183 IGLV5-48A0A075B6I7 105 aa5.04□□□□□ -1.6
NEDD9-204ENST00000448183 APLNQ9ULZ1 77 aa5.04□□□□□ -1.6
NEDD9-204ENST00000448183 MAST4O15021 2626 aa5.04□□□□□ -1.6
NEDD9-204ENST00000448183 CDC42SE1Q9NRR8 79 aa5.03□□□□□ -1.6
NEDD9-204ENST00000448183 LINC00304Q8N9R0 145 aa5.02□□□□□ -1.61
NEDD9-204ENST00000448183 A0A096LNT2 108 aa5.02□□□□□ -1.61
NEDD9-204ENST00000448183 OCR1Q9BZK8 76 aa5.02□□□□□ -1.61
NEDD9-204ENST00000448183 WIPF1O43516 503 aa5.02□□□□□ -1.61
NEDD9-204ENST00000448183 WWC2-AS2Q96NR7 200 aa5.01□□□□□ -1.61
NEDD9-204ENST00000448183 KRTAP10-11P60412 298 aa5.01□□□□□ -1.61
NEDD9-204ENST00000448183 FAM104AQ969W3 186 aa5.01□□□□□ -1.61
NEDD9-204ENST00000448183 SPRR4Q96PI1 79 aa5.01□□□□□ -1.61
NEDD9-204ENST00000448183 HECTD1Q9ULT8 2610 aa5.01□□□□□ -1.61
NEDD9-204ENST00000448183 K7EIL1 84 aa5.01□□□□□ -1.61
NEDD9-204ENST00000448183 A0A087WTM6 91 aa5□□□□□ -1.61
NEDD9-204ENST00000448183 ANAPC11Q9NYG5 84 aa5□□□□□ -1.61
NEDD9-204ENST00000448183 Q1T7F1 81 aa5□□□□□ -1.61
NEDD9-204ENST00000448183 CR1P17927 2039 aa5□□□□□ -1.61
NEDD9-204ENST00000448183 IGLV5-37A0A075B6J1 123 aa4.99□□□□□ -1.61
NEDD9-204ENST00000448183 CNBPP62633 177 aaKnown RBP4.99□□□□□ -1.61
NEDD9-204ENST00000448183 IGLV7-43P04211 117 aa4.99□□□□□ -1.61
NEDD9-204ENST00000448183 PSORS1C2Q9UIG4 136 aa4.99□□□□□ -1.61
NEDD9-204ENST00000448183 ZNF575Q86XF7 245 aa4.98□□□□□ -1.61
NEDD9-204ENST00000448183 C9orf92A6NGG3 77 aa4.98□□□□□ -1.61
NEDD9-204ENST00000448183 CASC10Q5T4H9 136 aa4.98□□□□□ -1.61
NEDD9-204ENST00000448183 PRR26Q8N8Z3 221 aa4.98□□□□□ -1.61
NEDD9-204ENST00000448183 KRTAP10-3P60369 221 aa4.97□□□□□ -1.61
NEDD9-204ENST00000448183 UTRNP46939 3433 aa4.96□□□□□ -1.62
NEDD9-204ENST00000448183 Q8N1X5 172 aa4.95□□□□□ -1.62
NEDD9-204ENST00000448183 CEP350Q5VT06 3117 aa4.95□□□□□ -1.62
NEDD9-204ENST00000448183 DNAH12Q6ZR08 3092 aa4.95□□□□□ -1.62
NEDD9-204ENST00000448183 COX6B2Q6YFQ2 88 aa4.94□□□□□ -1.62
NEDD9-204ENST00000448183 IGLV7-46A0A075B6I9 117 aa4.94□□□□□ -1.62
NEDD9-204ENST00000448183 FLNAP21333 2647 aaKnown RBP4.93□□□□□ -1.62
NEDD9-204ENST00000448183 A0A0D9SG42 100 aa4.93□□□□□ -1.62
NEDD9-204ENST00000448183 Q75L30 129 aa4.91□□□□□ -1.62
NEDD9-204ENST00000448183 J3QL48 77 aa4.91□□□□□ -1.62
NEDD9-204ENST00000448183 AKAP13Q12802 2813 aa4.9□□□□□ -1.62
NEDD9-204ENST00000448183 RBM12B-AS1Q9P1G2 102 aa4.9□□□□□ -1.62
NEDD9-204ENST00000448183 SMR3BP02814 79 aaPredicted RBP4.9□□□□□ -1.62
NEDD9-204ENST00000448183 Q5XG85 94 aa4.9□□□□□ -1.63
NEDD9-204ENST00000448183 STAB1Q9NY15 2570 aa4.9□□□□□ -1.63
NEDD9-204ENST00000448183 LINC01554Q52M75 96 aa4.89□□□□□ -1.63
NEDD9-204ENST00000448183 FLG2Q5D862 2391 aaPredicted RBP4.89□□□□□ -1.63
NEDD9-204ENST00000448183 Q8N9P0 234 aaPredicted RBP4.89□□□□□ -1.63
NEDD9-204ENST00000448183 HRES1P13985 223 aa4.89□□□□□ -1.63
NEDD9-204ENST00000448183 ITPR3Q14573 2671 aa4.89□□□□□ -1.63
NEDD9-204ENST00000448183 CYSTM1Q9H1C7 97 aa4.89□□□□□ -1.63
NEDD9-204ENST00000448183 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
NEDD9-204ENST00000448183 FP248Q71RG6 208 aaPredicted RBP4.88□□□□□ -1.63
NEDD9-204ENST00000448183 A0A1B0GU33 70 aa4.87□□□□□ -1.63
NEDD9-204ENST00000448183 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
NEDD9-204ENST00000448183 FAM229BQ4G0N7 80 aa4.86□□□□□ -1.63
NEDD9-204ENST00000448183 MMP24-AS1A0A0U1RRL7 71 aa4.86□□□□□ -1.63
NEDD9-204ENST00000448183 KRTAP1-3Q8IUG1 177 aa4.86□□□□□ -1.63
NEDD9-204ENST00000448183 KRTAP1-1Q07627 177 aa4.84□□□□□ -1.63
NEDD9-204ENST00000448183 SPRR1AP35321 89 aa4.84□□□□□ -1.63
NEDD9-204ENST00000448183 CENPEQ02224 2701 aa4.84□□□□□ -1.63
NEDD9-204ENST00000448183 Q8NDZ9 215 aa4.84□□□□□ -1.63
NEDD9-204ENST00000448183 OXTP01178 125 aa4.83□□□□□ -1.64
NEDD9-204ENST00000448183 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.82□□□□□ -1.64
NEDD9-204ENST00000448183 HELZ2Q9BYK8 2649 aaKnown RBP4.82□□□□□ -1.64
NEDD9-204ENST00000448183 Q5VV11 94 aa4.82□□□□□ -1.64
NEDD9-204ENST00000448183 CHD6Q8TD26 2715 aa4.81□□□□□ -1.64
NEDD9-204ENST00000448183 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
NEDD9-204ENST00000448183 NBEAL1Q6ZS30 2694 aa4.8□□□□□ -1.64
NEDD9-204ENST00000448183 TNP2Q05952 138 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms