RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 Q6ZRX8 168 aa8.89□□□□□ -0.99
HMGB2-203ENST00000446922 Q8NBF4 154 aa8.89□□□□□ -0.99
HMGB2-203ENST00000446922 PPDPFQ9H3Y8 114 aa8.89□□□□□ -0.99
HMGB2-203ENST00000446922 A0A0J9YXY3 114 aa8.88□□□□□ -0.99
HMGB2-203ENST00000446922 RPS29P62273 56 aaKnown RBP8.88□□□□□ -0.99
HMGB2-203ENST00000446922 SYS1-DBNDD2H3BUS1 97 aa8.87□□□□□ -0.99
HMGB2-203ENST00000446922 Q9BRP9 147 aa8.87□□□□□ -0.99
HMGB2-203ENST00000446922 TIMM17BO60830 172 aa8.86□□□□□ -0.99
HMGB2-203ENST00000446922 GAGE2AQ6NT46 116 aa8.86□□□□□ -0.99
HMGB2-203ENST00000446922 TRAV23DV6A0A075B6W5 121 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 HIST1H2BKO60814 126 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 ERC2-IT1O76042 136 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 HIST1H2BJP06899 126 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 HIST1H2BOP23527 126 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 HIST1H2BBP33778 126 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 HINT1P49773 126 aaPredicted RBP8.85□□□□□ -0.99
HMGB2-203ENST00000446922 HIST1H2BDP58876 126 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 HIST1H2BCP62807 126 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 HIST2H2BEQ16778 126 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.85□□□□□ -0.99
HMGB2-203ENST00000446922 ADAMTSL4-AS1Q5T5F5 129 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 PET117Q6UWS5 81 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 HIST1H2BHQ93079 126 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 HIST1H2BNQ99877 126 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 HIST1H2BMQ99879 126 aa8.85□□□□□ -0.99
HMGB2-203ENST00000446922 LINC01545Q5VT33 79 aa8.84□□□□□ -0.99
HMGB2-203ENST00000446922 SOSTDC1Q6X4U4 206 aa8.84□□□□□ -0.99
HMGB2-203ENST00000446922 ZNF73O43830 326 aaPredicted RBP8.83□□□□□ -1
HMGB2-203ENST00000446922 SPANXCQ9NY87 97 aa8.83□□□□□ -1
HMGB2-203ENST00000446922 MOBPQ13875 183 aa8.81□□□□□ -1
HMGB2-203ENST00000446922 LINC00308Q8TCZ7 52 aa8.81□□□□□ -1
HMGB2-203ENST00000446922 LITAFQ99732 161 aa8.81□□□□□ -1
HMGB2-203ENST00000446922 IGLV9-49A0A0B4J1Y8 123 aa8.8□□□□□ -1
HMGB2-203ENST00000446922 LINC00518Q8N0U6 118 aa8.8□□□□□ -1
HMGB2-203ENST00000446922 NPC2P61916 151 aa8.79□□□□□ -1
HMGB2-203ENST00000446922 KRTAP13-3Q3SY46 172 aa8.79□□□□□ -1
HMGB2-203ENST00000446922 MUC17Q685J3 4493 aa8.79□□□□□ -1
HMGB2-203ENST00000446922 SLC25A20O43772 301 aa8.78□□□□□ -1
HMGB2-203ENST00000446922 COA6Q5JTJ3 125 aaKnown RBP8.78□□□□□ -1
HMGB2-203ENST00000446922 SPANXDQ9BXN6 97 aa8.78□□□□□ -1
HMGB2-203ENST00000446922 ZNF815PA8K554 130 aa8.77□□□□□ -1.01
HMGB2-203ENST00000446922 SLC25A34Q6PIV7 304 aa8.77□□□□□ -1.01
HMGB2-203ENST00000446922 Q8N377 158 aa8.77□□□□□ -1.01
HMGB2-203ENST00000446922 DHRS4-AS1Q9P1J3 65 aa8.77□□□□□ -1.01
HMGB2-203ENST00000446922 C3orf79P0CE67 100 aa8.76□□□□□ -1.01
HMGB2-203ENST00000446922 OR13C6PQ8NH95 151 aa8.76□□□□□ -1.01
HMGB2-203ENST00000446922 SPRR1BP22528 89 aa8.75□□□□□ -1.01
HMGB2-203ENST00000446922 AKR1D1P51857 326 aa8.75□□□□□ -1.01
HMGB2-203ENST00000446922 COPS9Q8WXC6 57 aa8.75□□□□□ -1.01
HMGB2-203ENST00000446922 ASB16-AS1Q495Z4 193 aa8.73□□□□□ -1.01
HMGB2-203ENST00000446922 Q6ZVH6 145 aa8.73□□□□□ -1.01
HMGB2-203ENST00000446922 TRBV7-6A0A0J9YX20 115 aa8.72□□□□□ -1.01
HMGB2-203ENST00000446922 C20orf202A1L168 122 aa8.72□□□□□ -1.01
HMGB2-203ENST00000446922 C9orf153Q5TBE3 101 aa8.72□□□□□ -1.01
HMGB2-203ENST00000446922 ST20-AS1Q8NBB2 130 aa8.72□□□□□ -1.01
HMGB2-203ENST00000446922 FAT4Q6V0I7 4981 aa8.71□□□□□ -1.01
HMGB2-203ENST00000446922 IFITM1P13164 125 aa8.71□□□□□ -1.02
HMGB2-203ENST00000446922 ELOF1P60002 83 aaKnown RBP8.71□□□□□ -1.02
HMGB2-203ENST00000446922 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
HMGB2-203ENST00000446922 KRTDAPP60985 99 aa8.7□□□□□ -1.02
HMGB2-203ENST00000446922 LAMTOR3Q9UHA4 124 aa8.7□□□□□ -1.02
HMGB2-203ENST00000446922 COX7BP24311 80 aa8.69□□□□□ -1.02
HMGB2-203ENST00000446922 SCGB1D4Q6XE38 83 aa8.69□□□□□ -1.02
HMGB2-203ENST00000446922 C6orf99Q4VX62 202 aa8.68□□□□□ -1.02
HMGB2-203ENST00000446922 TTTY13Q9BZ97 58 aa8.68□□□□□ -1.02
HMGB2-203ENST00000446922 SNRPEP62304 92 aaKnown RBP8.67□□□□□ -1.02
HMGB2-203ENST00000446922 LIMD2Q9BT23 127 aa8.67□□□□□ -1.02
HMGB2-203ENST00000446922 CD164Q04900 197 aa8.66□□□□□ -1.02
HMGB2-203ENST00000446922 A0A1B0GWB2 263 aa8.65□□□□□ -1.02
HMGB2-203ENST00000446922 TAL2Q16559 108 aa8.65□□□□□ -1.02
HMGB2-203ENST00000446922 TEX49A0A1B0GTD5 131 aa8.64□□□□□ -1.03
HMGB2-203ENST00000446922 A4D1N5 150 aa8.64□□□□□ -1.03
HMGB2-203ENST00000446922 XP32Q5T750 250 aa8.64□□□□□ -1.03
HMGB2-203ENST00000446922 ANKRD39Q53RE8 183 aa8.63□□□□□ -1.03
HMGB2-203ENST00000446922 PRO1933Q9H354 126 aa8.62□□□□□ -1.03
HMGB2-203ENST00000446922 TRAV13-2A0A0B4J235 113 aa8.61□□□□□ -1.03
HMGB2-203ENST00000446922 MUSTN1Q8IVN3 82 aa8.61□□□□□ -1.03
HMGB2-203ENST00000446922 A6NDN8 102 aa8.6□□□□□ -1.03
HMGB2-203ENST00000446922 Q5XG85 94 aa8.6□□□□□ -1.03
HMGB2-203ENST00000446922 NHP2Q9NX24 153 aaKnown RBP8.6□□□□□ -1.03
HMGB2-203ENST00000446922 IGLV5-48A0A075B6I7 105 aa8.59□□□□□ -1.03
HMGB2-203ENST00000446922 PCP2Q8IVA1 136 aa8.58□□□□□ -1.04
HMGB2-203ENST00000446922 ATOH7Q8N100 152 aa8.58□□□□□ -1.04
HMGB2-203ENST00000446922 DEFB105AQ8NG35 78 aa8.58□□□□□ -1.04
HMGB2-203ENST00000446922 SMIM29Q86T20 159 aa8.57□□□□□ -1.04
HMGB2-203ENST00000446922 H7C2G1 150 aa8.56□□□□□ -1.04
HMGB2-203ENST00000446922 LINC01547P58512 204 aaPredicted RBP8.56□□□□□ -1.04
HMGB2-203ENST00000446922 Q1RN00 199 aa8.56□□□□□ -1.04
HMGB2-203ENST00000446922 KRTAP9-2Q9BYQ4 174 aa8.56□□□□□ -1.04
HMGB2-203ENST00000446922 HRCT1Q6UXD1 115 aa8.55□□□□□ -1.04
HMGB2-203ENST00000446922 VAMP3Q15836 100 aa8.54□□□□□ -1.04
HMGB2-203ENST00000446922 SMIM11BQ8TCY0 68 aa8.54□□□□□ -1.04
HMGB2-203ENST00000446922 KRTAP4-1Q9BYQ7 146 aa8.54□□□□□ -1.04
HMGB2-203ENST00000446922 HSBP1L1C9JCN9 74 aa8.53□□□□□ -1.04
HMGB2-203ENST00000446922 S100A2P29034 98 aa8.52□□□□□ -1.05
HMGB2-203ENST00000446922 HIST3H2BBQ8N257 126 aa8.52□□□□□ -1.05
HMGB2-203ENST00000446922 HIST1H2BLQ99880 126 aa8.51□□□□□ -1.05
HMGB2-203ENST00000446922 S100A1P23297 94 aa8.48□□□□□ -1.05
HMGB2-203ENST00000446922 LINC00575Q6W349 94 aa8.48□□□□□ -1.05
HMGB2-203ENST00000446922 C1orf195Q5TG92 126 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms