RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 TRAV12-1A0A0B4J245 112 aa13.38□□□□□ -0.27
PMS1-214ENST00000446877 MYMXA0A1B0GTQ4 84 aa13.38□□□□□ -0.27
PMS1-214ENST00000446877 Q6ZRX8 168 aa13.38□□□□□ -0.27
PMS1-214ENST00000446877 MT1HP80294 61 aa13.37□□□□□ -0.27
PMS1-214ENST00000446877 HSPB8Q9UJY1 196 aa13.37□□□□□ -0.27
PMS1-214ENST00000446877 TRBV10-2A0A0K0K1G8 114 aa13.36□□□□□ -0.27
PMS1-214ENST00000446877 IGLV8-61A0A075B6I0 122 aa13.35□□□□□ -0.27
PMS1-214ENST00000446877 KRTAP19-2Q3LHN2 52 aa13.35□□□□□ -0.27
PMS1-214ENST00000446877 PCOTHQ58A44 107 aa13.35□□□□□ -0.27
PMS1-214ENST00000446877 FABP4P15090 132 aa13.34□□□□□ -0.27
PMS1-214ENST00000446877 JOSD1Q15040 202 aaPredicted RBP13.34□□□□□ -0.27
PMS1-214ENST00000446877 S100A7L2Q5SY68 101 aa13.32□□□□□ -0.28
PMS1-214ENST00000446877 LOC107984156A0A0G2JMH3 177 aa13.3□□□□□ -0.28
PMS1-214ENST00000446877 ARL17AQ8IVW1 177 aa13.3□□□□□ -0.28
PMS1-214ENST00000446877 MIEN1Q9BRT3 115 aa13.3□□□□□ -0.28
PMS1-214ENST00000446877 SPANXB1Q9NS25 103 aaPredicted RBP13.3□□□□□ -0.28
PMS1-214ENST00000446877 LIMD2Q9BT23 127 aa13.28□□□□□ -0.28
PMS1-214ENST00000446877 C9orf92A6NGG3 77 aa13.26□□□□□ -0.29
PMS1-214ENST00000446877 H0Y8G0 127 aa13.26□□□□□ -0.29
PMS1-214ENST00000446877 IGLV6-57P01721 117 aa13.26□□□□□ -0.29
PMS1-214ENST00000446877 TRAV23DV6A0A075B6W5 121 aa13.25□□□□□ -0.29
PMS1-214ENST00000446877 ST20-AS1Q8NBB2 130 aa13.25□□□□□ -0.29
PMS1-214ENST00000446877 C5orf52A6NGY3 159 aa13.23□□□□□ -0.29
PMS1-214ENST00000446877 ZNF73O43830 326 aaPredicted RBP13.22□□□□□ -0.29
PMS1-214ENST00000446877 NDUFC2O95298 119 aa13.22□□□□□ -0.29
PMS1-214ENST00000446877 HRCT1Q6UXD1 115 aa13.22□□□□□ -0.29
PMS1-214ENST00000446877 SYS1-DBNDD2H3BUS1 97 aa13.21□□□□□ -0.29
PMS1-214ENST00000446877 LEPROTO15243 131 aa13.21□□□□□ -0.29
PMS1-214ENST00000446877 S100A6P06703 90 aa13.21□□□□□ -0.29
PMS1-214ENST00000446877 LORP23490 312 aaPredicted RBP13.21□□□□□ -0.29
PMS1-214ENST00000446877 HINT1P49773 126 aaPredicted RBP13.21□□□□□ -0.29
PMS1-214ENST00000446877 TSPEAR-AS2P59090 65 aa13.21□□□□□ -0.29
PMS1-214ENST00000446877 KRTAP10-6P60371 365 aaPredicted RBP13.21□□□□□ -0.29
PMS1-214ENST00000446877 M0R2T5 61 aa13.2□□□□□ -0.3
PMS1-214ENST00000446877 PLNP26678 52 aa13.2□□□□□ -0.3
PMS1-214ENST00000446877 SLC25A34Q6PIV7 304 aa13.2□□□□□ -0.3
PMS1-214ENST00000446877 DPM2O94777 84 aa13.19□□□□□ -0.3
PMS1-214ENST00000446877 PET117Q6UWS5 81 aa13.19□□□□□ -0.3
PMS1-214ENST00000446877 HIST3H2BBQ8N257 126 aa13.18□□□□□ -0.3
PMS1-214ENST00000446877 J3QQQ9 107 aa13.17□□□□□ -0.3
PMS1-214ENST00000446877 C3orf79P0CE67 100 aa13.17□□□□□ -0.3
PMS1-214ENST00000446877 CBY1Q9Y3M2 126 aa13.17□□□□□ -0.3
PMS1-214ENST00000446877 IGKCP01834 107 aa13.16□□□□□ -0.3
PMS1-214ENST00000446877 PMCHL2Q9BQD1 86 aa13.16□□□□□ -0.3
PMS1-214ENST00000446877 S100A2P29034 98 aa13.15□□□□□ -0.3
PMS1-214ENST00000446877 NMUP48645 174 aa13.15□□□□□ -0.3
PMS1-214ENST00000446877 LINC01545Q5VT33 79 aa13.15□□□□□ -0.3
PMS1-214ENST00000446877 LAMTOR3Q9UHA4 124 aa13.14□□□□□ -0.31
PMS1-214ENST00000446877 LGALS3P17931 250 aaKnown RBP13.13□□□□□ -0.31
PMS1-214ENST00000446877 KRTDAPP60985 99 aa13.13□□□□□ -0.31
PMS1-214ENST00000446877 HERVK_113P61574 105 aa13.13□□□□□ -0.31
PMS1-214ENST00000446877 SNRPEP62304 92 aaKnown RBP13.13□□□□□ -0.31
PMS1-214ENST00000446877 SPRR1BP22528 89 aa13.12□□□□□ -0.31
PMS1-214ENST00000446877 HIST1H2BLQ99880 126 aa13.12□□□□□ -0.31
PMS1-214ENST00000446877 NPC2P61916 151 aa13.11□□□□□ -0.31
PMS1-214ENST00000446877 COX6B2Q6YFQ2 88 aa13.11□□□□□ -0.31
PMS1-214ENST00000446877 DHRS4-AS1Q9P1J3 65 aa13.09□□□□□ -0.31
PMS1-214ENST00000446877 C20orf202A1L168 122 aa13.08□□□□□ -0.32
PMS1-214ENST00000446877 SOSTDC1Q6X4U4 206 aa13.08□□□□□ -0.32
PMS1-214ENST00000446877 AKR1D1P51857 326 aa13.06□□□□□ -0.32
PMS1-214ENST00000446877 CD164Q04900 197 aa13.06□□□□□ -0.32
PMS1-214ENST00000446877 EIF4EBP3O60516 100 aaPredicted RBP13.05□□□□□ -0.32
PMS1-214ENST00000446877 OR13C6PQ8NH95 151 aa13.05□□□□□ -0.32
PMS1-214ENST00000446877 ADAMTSL4-AS1Q5T5F5 129 aa13.04□□□□□ -0.32
PMS1-214ENST00000446877 PRO1933Q9H354 126 aa13.04□□□□□ -0.32
PMS1-214ENST00000446877 E9PLD3 99 aa13.02□□□□□ -0.33
PMS1-214ENST00000446877 H7C2G1 150 aa13.02□□□□□ -0.33
PMS1-214ENST00000446877 TAL2Q16559 108 aa13.02□□□□□ -0.33
PMS1-214ENST00000446877 FLGP20930 4061 aaPredicted RBP13.02□□□□□ -0.33
PMS1-214ENST00000446877 A0A0J9YXY3 114 aa13.01□□□□□ -0.33
PMS1-214ENST00000446877 Q1RN00 199 aa13□□□□□ -0.33
PMS1-214ENST00000446877 DEFB105AQ8NG35 78 aa13□□□□□ -0.33
PMS1-214ENST00000446877 RPL37P61927 97 aaKnown RBP12.99□□□□□ -0.33
PMS1-214ENST00000446877 SPANXCQ9NY87 97 aa12.98□□□□□ -0.33
PMS1-214ENST00000446877 COX7BP24311 80 aa12.96□□□□□ -0.33
PMS1-214ENST00000446877 Q5XG85 94 aa12.96□□□□□ -0.33
PMS1-214ENST00000446877 C1orf195Q5TG92 126 aa12.95□□□□□ -0.34
PMS1-214ENST00000446877 TEX49A0A1B0GTD5 131 aa12.94□□□□□ -0.34
PMS1-214ENST00000446877 ATOH7Q8N100 152 aa12.94□□□□□ -0.34
PMS1-214ENST00000446877 LINC00308Q8TCZ7 52 aa12.94□□□□□ -0.34
PMS1-214ENST00000446877 SPANXDQ9BXN6 97 aa12.94□□□□□ -0.34
PMS1-214ENST00000446877 ELOF1P60002 83 aaKnown RBP12.93□□□□□ -0.34
PMS1-214ENST00000446877 TMA7Q9Y2S6 64 aaKnown RBP12.93□□□□□ -0.34
PMS1-214ENST00000446877 C6orf99Q4VX62 202 aa12.91□□□□□ -0.34
PMS1-214ENST00000446877 SCGB1D1O95968 90 aa12.9□□□□□ -0.34
PMS1-214ENST00000446877 ANKRD39Q53RE8 183 aa12.89□□□□□ -0.35
PMS1-214ENST00000446877 SMIM29Q86T20 159 aa12.87□□□□□ -0.35
PMS1-214ENST00000446877 LINC00518Q8N0U6 118 aa12.87□□□□□ -0.35
PMS1-214ENST00000446877 HSBP1L1C9JCN9 74 aa12.86□□□□□ -0.35
PMS1-214ENST00000446877 LITAFQ99732 161 aa12.86□□□□□ -0.35
PMS1-214ENST00000446877 ZNF815PA8K554 130 aa12.85□□□□□ -0.35
PMS1-214ENST00000446877 TIMM17BO60830 172 aa12.85□□□□□ -0.35
PMS1-214ENST00000446877 TTTY13Q9BZ97 58 aa12.83□□□□□ -0.36
PMS1-214ENST00000446877 A0A0G2JQZ4 141 aa12.82□□□□□ -0.36
PMS1-214ENST00000446877 TCL1BO95988 128 aa12.82□□□□□ -0.36
PMS1-214ENST00000446877 TRBV7-6A0A0J9YX20 115 aa12.81□□□□□ -0.36
PMS1-214ENST00000446877 Q6Q795 121 aa12.81□□□□□ -0.36
PMS1-214ENST00000446877 PCP2Q8IVA1 136 aa12.79□□□□□ -0.36
PMS1-214ENST00000446877 KRTAP9-7A8MTY7 169 aa12.78□□□□□ -0.36
PMS1-214ENST00000446877 IGLV5-48A0A075B6I7 105 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms