RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 CASC2Q6XLA1 102 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 NTM-AS1Q6ZSK4 140 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 KIF25-AS1Q9Y6Z4 181 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 IGHV1-3A0A0C4DH29 117 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 K7EIL1 84 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 DEFB1P60022 68 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 Q8N9L7 120 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 G3V318 75 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 RNASE3P12724 160 aaKnown RBP1.95□□□□□ -2.1
LIG4-203ENST00000442234 SLURP1P55000 103 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 PHF5AQ7RTV0 110 aaKnown RBP1.95□□□□□ -2.1
LIG4-203ENST00000442234 DNAH9Q9NYC9 4486 aa1.95□□□□□ -2.1
LIG4-203ENST00000442234 M0QY20 66 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 DEFB135Q30KP9 77 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 C9orf116Q5BN46 136 aaPredicted RBP1.94□□□□□ -2.1
LIG4-203ENST00000442234 Q6ZTC4 211 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 RETNLBQ9BQ08 111 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 PSCAO43653 123 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 NDUFB1O75438 58 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 CTSGP08311 255 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 KRTAP10-3P60369 221 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 OBSCN-AS1Q96MR7 158 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 CYP4F30PQ9H0H9 118 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 RAI1Q7Z5J4 1906 aaPredicted RBP1.94□□□□□ -2.1
LIG4-203ENST00000442234 ATP6V0E1O15342 81 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 SMR3BP02814 79 aaPredicted RBP1.94□□□□□ -2.1
LIG4-203ENST00000442234 PRM2P04554 102 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 Q5VV11 94 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 ZFAND2AQ8N6M9 145 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 Q8N814 137 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 PRAC1Q96KF2 57 aa1.94□□□□□ -2.1
LIG4-203ENST00000442234 VPS13BQ7Z7G8 4022 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 CCL18P55774 89 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 KRTAP21-3Q3LHN1 58 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 VPS13DQ5THJ4 4388 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 IGLV11-55A0A075B6I3 123 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 Q6ZQT0 140 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 ZNF575Q86XF7 245 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 LINC00208Q96KT6 92 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 LINC00467Q9BRT7 94 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 PKD1P98161 4303 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 IGHV4-28A0A0C4DH34 117 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 K7EQG2 157 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 C6orf99Q4VX62 202 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 C11orf71Q6IPW1 123 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 B9D2Q9BPU9 175 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 ALMS1Q8TCU4 4167 aa1.93□□□□□ -2.1
LIG4-203ENST00000442234 SMIM1B2RUZ4 78 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 LINC00313P59037 77 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 LINC00315P59091 139 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 HIGD2BQ4VC39 106 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 LCE3BQ5TA77 95 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 RNF5Q99942 180 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 CDC42SE1Q9NRR8 79 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 SACSQ9NZJ4 4579 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 IGLV3-9A0A075B6K5 115 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 IGKV2-28A0A075B6P5 120 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 IGHV3-16A0A0C4DH30 117 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 A6NN06 94 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 NDUFA4O00483 81 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 IGKV2D-28P01615 120 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 COX6A2Q02221 97 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 SPAG11BQ08648 103 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 Q6ZQY7 126 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 KRTAP9-9Q9BYP9 154 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 KRTAP9-4Q9BYQ2 154 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 DPM3Q9P2X0 92 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 A0A096LPF7 62 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 FSHBP01225 129 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 INSP01308 110 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 KRTAP10-11P60412 298 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 SMIM29Q86T20 159 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 KRTAP4-7Q9BYR0 210 aa1.92□□□□□ -2.1
LIG4-203ENST00000442234 A0A0A0MQY5 61 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 TRBV6-4A0A1B0GX49 114 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 C3orf84H3BNL1 204 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 REG3AQ06141 175 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 SPINK13Q1W4C9 94 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 LINC00242Q5T6M2 205 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 LINC00574Q9H8X3 128 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 EPPK1P58107 5090 aaKnown RBP1.91□□□□□ -2.1
LIG4-203ENST00000442234 IGLV5-39A0A0G2JS06 123 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 LOC101927531A0A1B0GV80 90 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 CASC10Q5T4H9 136 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 TRGV2A0A075B6R0 118 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 ETDCA0A1B0GVM5 59 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 PROK1P58294 105 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 MRGPRG-AS1Q2M3A8 158 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 OCR1Q9BZK8 76 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 PCLOQ9Y6V0 5065 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 CR1P17927 2039 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 LOC110117498A0A087WWA1 95 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 H3BQ85 93 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 DEFB130BP0DP73 79 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 DEFB130AP0DP74 79 aa1.91□□□□□ -2.1
LIG4-203ENST00000442234 RYR1P21817 5038 aa1.9□□□□□ -2.1
LIG4-203ENST00000442234 A0A0J9YWU9 116 aa1.9□□□□□ -2.1
LIG4-203ENST00000442234 IGHV4-30-4P0DP06 118 aa1.9□□□□□ -2.1
LIG4-203ENST00000442234 MOBPQ13875 183 aa1.9□□□□□ -2.1
LIG4-203ENST00000442234 Q6YL49 198 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms