RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 LINC00528Q8N1L1 170 aa3.87□□□□□ -1.79
VPS50-205ENST00000441602 LINC00476Q8WZB0 136 aa3.87□□□□□ -1.79
VPS50-205ENST00000441602 GAGE2AQ6NT46 116 aa3.87□□□□□ -1.79
VPS50-205ENST00000441602 PKD1L1Q8TDX9 2849 aa3.86□□□□□ -1.79
VPS50-205ENST00000441602 RPL37AP8A6NKH3 93 aa3.86□□□□□ -1.79
VPS50-205ENST00000441602 RBM3P98179 157 aaKnown RBP3.86□□□□□ -1.79
VPS50-205ENST00000441602 DSCR8Q96T75 97 aa3.86□□□□□ -1.79
VPS50-205ENST00000441602 ANK2Q01484 3957 aa3.86□□□□□ -1.79
VPS50-205ENST00000441602 FAM168BA1KXE4 195 aa3.86□□□□□ -1.79
VPS50-205ENST00000441602 Q6ZRX8 168 aa3.86□□□□□ -1.79
VPS50-205ENST00000441602 STAB2Q8WWQ8 2551 aa3.86□□□□□ -1.79
VPS50-205ENST00000441602 IGLV5-52A0A0A0MRZ9 124 aa3.85□□□□□ -1.79
VPS50-205ENST00000441602 SPRR1AP35321 89 aa3.85□□□□□ -1.79
VPS50-205ENST00000441602 C14orf132Q9NPU4 83 aa3.85□□□□□ -1.79
VPS50-205ENST00000441602 RTL8CO15255 209 aa3.85□□□□□ -1.79
VPS50-205ENST00000441602 OBSCN-AS1Q96MR7 158 aa3.85□□□□□ -1.79
VPS50-205ENST00000441602 HUWE1Q7Z6Z7 4374 aaKnown RBP3.85□□□□□ -1.79
VPS50-205ENST00000441602 B5MCH6 92 aa3.85□□□□□ -1.79
VPS50-205ENST00000441602 SDIM1Q6ZPB5 146 aa3.85□□□□□ -1.79
VPS50-205ENST00000441602 FAM19A1Q7Z5A9 133 aa3.85□□□□□ -1.79
VPS50-205ENST00000441602 CMYA5Q8N3K9 4069 aa3.84□□□□□ -1.79
VPS50-205ENST00000441602 F8WEM9 126 aa3.84□□□□□ -1.79
VPS50-205ENST00000441602 CCKP06307 115 aa3.84□□□□□ -1.8
VPS50-205ENST00000441602 SCGB1A1P11684 91 aa3.84□□□□□ -1.8
VPS50-205ENST00000441602 NDUFV3P56181 108 aaKnown RBP3.84□□□□□ -1.8
VPS50-205ENST00000441602 UBE2AP49459 152 aa3.83□□□□□ -1.8
VPS50-205ENST00000441602 LINC00643Q86TS7 51 aa3.83□□□□□ -1.8
VPS50-205ENST00000441602 A0A1W2PNN7 141 aa3.83□□□□□ -1.8
VPS50-205ENST00000441602 CDIP1Q9H305 208 aa3.83□□□□□ -1.8
VPS50-205ENST00000441602 LOC110117498A0A087WWA1 95 aa3.83□□□□□ -1.8
VPS50-205ENST00000441602 CHTF8P0CG12 524 aa3.83□□□□□ -1.8
VPS50-205ENST00000441602 A0A1B0GV72 72 aa3.82□□□□□ -1.8
VPS50-205ENST00000441602 DEFB105AQ8NG35 78 aa3.82□□□□□ -1.8
VPS50-205ENST00000441602 UBL5Q9BZL1 73 aa3.82□□□□□ -1.8
VPS50-205ENST00000441602 PHF5AQ7RTV0 110 aaKnown RBP3.82□□□□□ -1.8
VPS50-205ENST00000441602 SPACA4Q8TDM5 124 aa3.82□□□□□ -1.8
VPS50-205ENST00000441602 KRTAP4-16G5E9R7 235 aaPredicted RBP3.81□□□□□ -1.8
VPS50-205ENST00000441602 H0Y9J4 135 aa3.81□□□□□ -1.8
VPS50-205ENST00000441602 BCE1O60756 84 aa3.81□□□□□ -1.8
VPS50-205ENST00000441602 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
VPS50-205ENST00000441602 HIGD2AQ9BW72 106 aa3.81□□□□□ -1.8
VPS50-205ENST00000441602 ATP5EP2Q5VTU8 51 aa3.8□□□□□ -1.8
VPS50-205ENST00000441602 DNAH9Q9NYC9 4486 aa3.8□□□□□ -1.8
VPS50-205ENST00000441602 XGP55808 180 aa3.8□□□□□ -1.8
VPS50-205ENST00000441602 FUSP35637 526 aaKnown RBP eCLIP3.8□□□□□ -1.8
VPS50-205ENST00000441602 Q6Q795 121 aa3.8□□□□□ -1.8
VPS50-205ENST00000441602 Q6ZQT0 140 aa3.8□□□□□ -1.8
VPS50-205ENST00000441602 SMCR5Q8TEV8 140 aa3.8□□□□□ -1.8
VPS50-205ENST00000441602 ZNF706Q9Y5V0 76 aaPredicted RBP3.8□□□□□ -1.8
VPS50-205ENST00000441602 IGLV5-48A0A075B6I7 105 aa3.79□□□□□ -1.8
VPS50-205ENST00000441602 A0A1B0GW54 56 aa3.79□□□□□ -1.8
VPS50-205ENST00000441602 MT-ATP8P03928 68 aa3.79□□□□□ -1.8
VPS50-205ENST00000441602 Q6JHZ5 121 aa3.79□□□□□ -1.8
VPS50-205ENST00000441602 IMUPQ9GZP8 106 aa3.79□□□□□ -1.8
VPS50-205ENST00000441602 TNP2Q05952 138 aa3.79□□□□□ -1.8
VPS50-205ENST00000441602 Q9BRP9 147 aa3.79□□□□□ -1.8
VPS50-205ENST00000441602 PRLHP81277 87 aa3.79□□□□□ -1.8
VPS50-205ENST00000441602 PLAC8Q9NZF1 115 aa3.79□□□□□ -1.8
VPS50-205ENST00000441602 TRBV7-4A0A0J9YYF1 115 aa3.78□□□□□ -1.8
VPS50-205ENST00000441602 Q8N377 158 aa3.78□□□□□ -1.8
VPS50-205ENST00000441602 LINC00336Q6ZUF6 198 aa3.78□□□□□ -1.8
VPS50-205ENST00000441602 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.78□□□□□ -1.8
VPS50-205ENST00000441602 EPM2AB3EWF7 344 aa3.78□□□□□ -1.81
VPS50-205ENST00000441602 TRBV7-7A0A0K0K1E9 115 aa3.77□□□□□ -1.81
VPS50-205ENST00000441602 PCP4P48539 62 aa3.77□□□□□ -1.81
VPS50-205ENST00000441602 LINC00846Q9NV44 126 aa3.77□□□□□ -1.81
VPS50-205ENST00000441602 C1orf137Q5JT78 98 aa3.76□□□□□ -1.81
VPS50-205ENST00000441602 ST20-AS1Q8NBB2 130 aa3.76□□□□□ -1.81
VPS50-205ENST00000441602 LCE6AA0A183 80 aa3.76□□□□□ -1.81
VPS50-205ENST00000441602 ERC2-IT1O76042 136 aa3.76□□□□□ -1.81
VPS50-205ENST00000441602 SPRR1BP22528 89 aa3.76□□□□□ -1.81
VPS50-205ENST00000441602 LINC01547P58512 204 aaPredicted RBP3.75□□□□□ -1.81
VPS50-205ENST00000441602 NREPQ16612 68 aa3.75□□□□□ -1.81
VPS50-205ENST00000441602 PANO1I0J062 215 aa3.75□□□□□ -1.81
VPS50-205ENST00000441602 HAMPP81172 84 aa3.74□□□□□ -1.81
VPS50-205ENST00000441602 Q8NBF4 154 aa3.74□□□□□ -1.81
VPS50-205ENST00000441602 IGKV3D-7A0A0C4DH55 119 aa3.74□□□□□ -1.81
VPS50-205ENST00000441602 Q6ZVQ6 151 aa3.74□□□□□ -1.81
VPS50-205ENST00000441602 IGLV8-61A0A075B6I0 122 aa3.73□□□□□ -1.81
VPS50-205ENST00000441602 ZNF861PO60384 105 aa3.73□□□□□ -1.81
VPS50-205ENST00000441602 PSORS1C2Q9UIG4 136 aa3.73□□□□□ -1.81
VPS50-205ENST00000441602 RPL37AP61513 92 aaKnown RBP3.72□□□□□ -1.81
VPS50-205ENST00000441602 HIST1H4AP62805 103 aaKnown RBP3.72□□□□□ -1.81
VPS50-205ENST00000441602 CXCL6P80162 114 aa3.72□□□□□ -1.81
VPS50-205ENST00000441602 DYNC2H1Q8NCM8 4307 aaKnown RBP3.72□□□□□ -1.81
VPS50-205ENST00000441602 KRTAP13-1Q8IUC0 172 aa3.72□□□□□ -1.81
VPS50-205ENST00000441602 C3orf22Q8N5N4 141 aa3.72□□□□□ -1.81
VPS50-205ENST00000441602 ANAPC13Q9BS18 74 aa3.72□□□□□ -1.81
VPS50-205ENST00000441602 KRTAP10-2P60368 255 aa3.72□□□□□ -1.81
VPS50-205ENST00000441602 KRTAP11-1Q8IUC1 163 aa3.72□□□□□ -1.81
VPS50-205ENST00000441602 SPRR4Q96PI1 79 aa3.72□□□□□ -1.81
VPS50-205ENST00000441602 IGLV7-43P04211 117 aa3.71□□□□□ -1.82
VPS50-205ENST00000441602 SMIM29Q86T20 159 aa3.71□□□□□ -1.82
VPS50-205ENST00000441602 BPY2O14599 106 aa3.71□□□□□ -1.82
VPS50-205ENST00000441602 C9orf153Q5TBE3 101 aa3.71□□□□□ -1.82
VPS50-205ENST00000441602 ATOX1O00244 68 aa3.71□□□□□ -1.82
VPS50-205ENST00000441602 FAM236AA0A1B0GUQ0 79 aa3.7□□□□□ -1.82
VPS50-205ENST00000441602 FAM236BA0A1B0GV22 79 aa3.7□□□□□ -1.82
VPS50-205ENST00000441602 A0A1W2PNM2 257 aa3.7□□□□□ -1.82
VPS50-205ENST00000441602 CRYGAP11844 174 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms