RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 Q0VG73 95 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 CATR1Q13166 79 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 SMIM21Q3B7S5 101 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 ETDBQ3ZM63 59 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 C1orf54Q8WWF1 131 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 COPS9Q8WXC6 57 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 PFDN5Q99471 154 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 C2orf88Q9BSF0 95 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 RERGLQ9H628 205 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 SAR1AQ9NR31 198 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 PRO1854Q9UHT4 67 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 FAM186AA6NE01 2351 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 TET3O43151 1660 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 KIF1AQ12756 1690 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 ZNF831Q5JPB2 1677 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 EPPK1P58107 5090 aaKnown RBP-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 ACACBO00763 2458 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 LY75O60449 1722 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 POLR1AO95602 1720 aaPredicted RBP-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 PRDM2Q13029 1718 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 SUPT6HQ7KZ85 1726 aaKnown RBP-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 PKD1L3Q7Z443 1732 aa-0.22□□□□□ -2.44
PFDN4-202ENST00000441080 ANKRD36BQ8N2N9 1353 aa-0.22□□□□□ -2.45
PFDN4-202ENST00000441080 A0A1B0GUL6 1792 aa-0.22□□□□□ -2.45
PFDN4-202ENST00000441080 RYR1P21817 5038 aa-0.22□□□□□ -2.45
PFDN4-202ENST00000441080 DOCK2Q92608 1830 aa-0.22□□□□□ -2.45
PFDN4-202ENST00000441080 FHAD1B1AJZ9 1412 aa-0.22□□□□□ -2.45
PFDN4-202ENST00000441080 DAPK1P53355 1430 aa-0.22□□□□□ -2.45
PFDN4-202ENST00000441080 COL12A1Q99715 3063 aa-0.22□□□□□ -2.45
PFDN4-202ENST00000441080 HTTP42858 3142 aa-0.22□□□□□ -2.45
PFDN4-202ENST00000441080 A2ML1A8K2U0 1454 aa-0.22□□□□□ -2.45
PFDN4-202ENST00000441080 CUBNO60494 3623 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 UTP20O75691 2785 aaKnown RBP-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 KIAA1109Q2LD37 5005 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 UBR4Q5T4S7 5183 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 TLN1Q9Y490 2541 aaKnown RBP-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 LRRC37A3O60309 1634 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 SHROOM2Q13796 1616 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 A0A0C4DFX4 3053 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 A0A0G2JMZ2 1700 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 CHD1O14646 1710 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 CEP152O94986 1710 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 NUP188Q5SRE5 1749 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 RICTORQ6R327 1708 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 MON2Q7Z3U7 1717 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 TOGARAM1Q9Y4F4 1720 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 STARD9Q9P2P6 4700 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 RNF213Q63HN8 5207 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 RGPD3A6NKT7 1758 aaPredicted RBP-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 RGPD4Q7Z3J3 1758 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 H3BVH4 76 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 NDUFA4O00483 81 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 GNGT2O14610 69 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 MT1FP04733 61 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 SMIM11AP58511 58 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 KRTDAPP60985 99 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 PLGLAQ15195 96 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 NCBP2-AS2Q69YL0 99 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 TMEM203Q969S6 136 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 PPP3R2Q96LZ3 170 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 PMCHL2Q9BQD1 86 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 TCEAL7Q9BRU2 100 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 UBL5Q9BZL1 73 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 SPANXCQ9NY87 97 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 TOMM7Q9P0U1 55 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 WDR87Q6ZQQ6 2873 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 PDCD11Q14690 1871 aaKnown RBP-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 SPTA1P02549 2419 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 KTN1Q86UP2 1357 aaKnown RBP-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 MYH13Q9UKX3 1938 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 DMXL1Q9Y485 3027 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 SCAPERQ9BY12 1400 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 NCOA2Q15596 1464 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 MLH3Q9UHC1 1453 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 CFAP46Q8IYW2 2715 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 KIAA0586Q9BVV6 1533 aa-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 EIF4G3O43432 1585 aaKnown RBP-0.23□□□□□ -2.45
PFDN4-202ENST00000441080 KIF14Q15058 1648 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 PREX2Q70Z35 1606 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 RAPGEF6Q8TEU7 1601 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 C5P01031 1676 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 SCN7AQ01118 1682 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 CUL7Q14999 1698 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 PREX1Q8TCU6 1659 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 LRRC37AA6NMS7 1700 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 PHLPP1O60346 1717 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 LRP1BQ9NZR2 4599 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 KMT2AQ03164 3969 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 CDK5RAP2Q96SN8 1893 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 ITPR2Q14571 2701 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 LPAP08519 4548 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 TRBV25-1A0A075B6N4 114 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 APOC2P02655 101 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 APELAP0DMC3 54 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 HTN3P15516 51 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 RPS25P62851 125 aaKnown RBP-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 DEFB121Q5J5C9 76 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 C12orf73Q69YU5 71 aa-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 C8orf59Q8N0T1 100 aaPredicted RBP-0.24□□□□□ -2.45
PFDN4-202ENST00000441080 RHPN1-AS1Q9BWJ2 59 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms