RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 CRYGAP11844 174 aa4.33□□□□□ -1.72
CNOT1-202ENST00000441024 TP53AIP1Q9HCN2 124 aa4.33□□□□□ -1.72
CNOT1-202ENST00000441024 PRR4Q16378 134 aa4.33□□□□□ -1.72
CNOT1-202ENST00000441024 LINC00588Q9Y4M8 146 aa4.33□□□□□ -1.72
CNOT1-202ENST00000441024 A6NED7 52 aa4.33□□□□□ -1.72
CNOT1-202ENST00000441024 Q8NBF4 154 aa4.32□□□□□ -1.72
CNOT1-202ENST00000441024 NBDYA0A0U1RRE5 68 aa4.32□□□□□ -1.72
CNOT1-202ENST00000441024 H3BPC8 53 aa4.32□□□□□ -1.72
CNOT1-202ENST00000441024 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
CNOT1-202ENST00000441024 C19orf73Q9NVV2 129 aa4.32□□□□□ -1.72
CNOT1-202ENST00000441024 ABCA2Q9BZC7 2435 aa4.32□□□□□ -1.72
CNOT1-202ENST00000441024 DNAH1Q9P2D7 4330 aa4.32□□□□□ -1.72
CNOT1-202ENST00000441024 VPREB1P12018 145 aa4.31□□□□□ -1.72
CNOT1-202ENST00000441024 DYNC2H1Q8NCM8 4307 aaKnown RBP4.31□□□□□ -1.72
CNOT1-202ENST00000441024 PRR34Q9NV39 138 aa4.31□□□□□ -1.72
CNOT1-202ENST00000441024 USP9XQ93008 2570 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-202ENST00000441024 GIG44P09565 113 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-202ENST00000441024 DOPEY1Q5JWR5 2465 aa4.3□□□□□ -1.72
CNOT1-202ENST00000441024 MYO18BQ8IUG5 2567 aa4.29□□□□□ -1.72
CNOT1-202ENST00000441024 ABCA12Q86UK0 2595 aa4.29□□□□□ -1.72
CNOT1-202ENST00000441024 TRBV7-4A0A0J9YYF1 115 aa4.29□□□□□ -1.72
CNOT1-202ENST00000441024 RPS28P62857 69 aaKnown RBP4.29□□□□□ -1.72
CNOT1-202ENST00000441024 SMIM29Q86T20 159 aa4.29□□□□□ -1.72
CNOT1-202ENST00000441024 C1orf64Q8NEQ6 169 aa4.29□□□□□ -1.72
CNOT1-202ENST00000441024 LINC00476Q8WZB0 136 aa4.29□□□□□ -1.72
CNOT1-202ENST00000441024 KCNQ1DNQ9H478 68 aa4.29□□□□□ -1.72
CNOT1-202ENST00000441024 TRRAPQ9Y4A5 3859 aa4.29□□□□□ -1.72
CNOT1-202ENST00000441024 DEFB116Q30KQ4 102 aa4.28□□□□□ -1.72
CNOT1-202ENST00000441024 Q6ZRP5 223 aa4.28□□□□□ -1.72
CNOT1-202ENST00000441024 PLA2G2DQ9UNK4 145 aa4.28□□□□□ -1.72
CNOT1-202ENST00000441024 ZNF462Q96JM2 2506 aa4.28□□□□□ -1.72
CNOT1-202ENST00000441024 EPM2AB3EWF7 344 aa4.28□□□□□ -1.72
CNOT1-202ENST00000441024 RTL8CO15255 209 aa4.28□□□□□ -1.72
CNOT1-202ENST00000441024 UTP20O75691 2785 aaKnown RBP4.28□□□□□ -1.72
CNOT1-202ENST00000441024 PHF5AQ7RTV0 110 aaKnown RBP4.27□□□□□ -1.73
CNOT1-202ENST00000441024 KRTAP1-3Q8IUG1 177 aa4.27□□□□□ -1.73
CNOT1-202ENST00000441024 IGLV1-50A0A075B6I6 118 aa4.27□□□□□ -1.73
CNOT1-202ENST00000441024 MUC4Q99102 2169 aa4.27□□□□□ -1.73
CNOT1-202ENST00000441024 A0A0U1RQV1 116 aa4.27□□□□□ -1.73
CNOT1-202ENST00000441024 PCOTHQ58A44 107 aa4.27□□□□□ -1.73
CNOT1-202ENST00000441024 TLX1NBP0CAT3 122 aa4.27□□□□□ -1.73
CNOT1-202ENST00000441024 ERC2-IT1O76042 136 aa4.26□□□□□ -1.73
CNOT1-202ENST00000441024 KRTAP10-3P60369 221 aa4.26□□□□□ -1.73
CNOT1-202ENST00000441024 LRRK2Q5S007 2527 aa4.26□□□□□ -1.73
CNOT1-202ENST00000441024 MOBPQ13875 183 aa4.26□□□□□ -1.73
CNOT1-202ENST00000441024 LINC00528Q8N1L1 170 aa4.26□□□□□ -1.73
CNOT1-202ENST00000441024 PKD1L2Q7Z442 2459 aa4.26□□□□□ -1.73
CNOT1-202ENST00000441024 FASNP49327 2511 aaKnown RBP4.26□□□□□ -1.73
CNOT1-202ENST00000441024 KRTAP10-11P60412 298 aa4.26□□□□□ -1.73
CNOT1-202ENST00000441024 SPTBN4Q9H254 2564 aa4.26□□□□□ -1.73
CNOT1-202ENST00000441024 USP9YO00507 2555 aaPredicted RBP4.25□□□□□ -1.73
CNOT1-202ENST00000441024 C1orf195Q5TG92 126 aa4.25□□□□□ -1.73
CNOT1-202ENST00000441024 DNAH7Q8WXX0 4024 aa4.25□□□□□ -1.73
CNOT1-202ENST00000441024 ST20-AS1Q8NBB2 130 aa4.25□□□□□ -1.73
CNOT1-202ENST00000441024 C15orf56Q8N910 161 aa4.24□□□□□ -1.73
CNOT1-202ENST00000441024 TACC2O95359 2948 aa4.24□□□□□ -1.73
CNOT1-202ENST00000441024 K7EIL1 84 aa4.24□□□□□ -1.73
CNOT1-202ENST00000441024 KRTAP1-1Q07627 177 aa4.24□□□□□ -1.73
CNOT1-202ENST00000441024 C8orf87E5RJ46 101 aa4.24□□□□□ -1.73
CNOT1-202ENST00000441024 IGSF10Q6WRI0 2623 aa4.23□□□□□ -1.73
CNOT1-202ENST00000441024 SERTAD4-AS1Q5TG53 156 aa4.23□□□□□ -1.73
CNOT1-202ENST00000441024 WWC2-AS2Q96NR7 200 aa4.23□□□□□ -1.73
CNOT1-202ENST00000441024 FN1P02751 2386 aaKnown RBP4.23□□□□□ -1.73
CNOT1-202ENST00000441024 TM2D3Q9BRN9 247 aa4.23□□□□□ -1.73
CNOT1-202ENST00000441024 ACYP2P14621 99 aa4.23□□□□□ -1.73
CNOT1-202ENST00000441024 TLN2Q9Y4G6 2542 aa4.22□□□□□ -1.73
CNOT1-202ENST00000441024 ANKRD17O75179 2603 aaKnown RBP4.22□□□□□ -1.73
CNOT1-202ENST00000441024 A8MWP4 228 aa4.22□□□□□ -1.73
CNOT1-202ENST00000441024 RPL37AP61513 92 aaKnown RBP4.22□□□□□ -1.73
CNOT1-202ENST00000441024 TRAV22A0A0B4J277 110 aa4.22□□□□□ -1.73
CNOT1-202ENST00000441024 LINC01600Q96MT4 127 aa4.22□□□□□ -1.73
CNOT1-202ENST00000441024 JMJD1CQ15652 2540 aa4.22□□□□□ -1.73
CNOT1-202ENST00000441024 EIF4EBP3O60516 100 aaPredicted RBP4.22□□□□□ -1.73
CNOT1-202ENST00000441024 RETNLBQ9BQ08 111 aa4.22□□□□□ -1.73
CNOT1-202ENST00000441024 PRKDCP78527 4128 aaKnown RBP4.22□□□□□ -1.73
CNOT1-202ENST00000441024 ZNF575Q86XF7 245 aa4.21□□□□□ -1.73
CNOT1-202ENST00000441024 LINC00313P59037 77 aa4.21□□□□□ -1.74
CNOT1-202ENST00000441024 FAM168BA1KXE4 195 aa4.21□□□□□ -1.74
CNOT1-202ENST00000441024 COL12A1Q99715 3063 aa4.2□□□□□ -1.74
CNOT1-202ENST00000441024 LOC101927531A0A1B0GV80 90 aa4.2□□□□□ -1.74
CNOT1-202ENST00000441024 C9orf129Q5T035 196 aaKnown RBP4.2□□□□□ -1.74
CNOT1-202ENST00000441024 LYSTQ99698 3801 aa4.2□□□□□ -1.74
CNOT1-202ENST00000441024 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
CNOT1-202ENST00000441024 SPACA4Q8TDM5 124 aa4.2□□□□□ -1.74
CNOT1-202ENST00000441024 ZFYVE26Q68DK2 2539 aa4.2□□□□□ -1.74
CNOT1-202ENST00000441024 PSPHP1O15172 72 aa4.2□□□□□ -1.74
CNOT1-202ENST00000441024 CHTF8P0CG12 524 aa4.2□□□□□ -1.74
CNOT1-202ENST00000441024 IGLV5-37A0A075B6J1 123 aa4.2□□□□□ -1.74
CNOT1-202ENST00000441024 TYMSOSQ8TAI1 123 aa4.19□□□□□ -1.74
CNOT1-202ENST00000441024 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
CNOT1-202ENST00000441024 IGKV2-30P06310 120 aa4.19□□□□□ -1.74
CNOT1-202ENST00000441024 CNBPP62633 177 aaKnown RBP4.19□□□□□ -1.74
CNOT1-202ENST00000441024 SSBP3-AS1Q7Z2R9 100 aa4.19□□□□□ -1.74
CNOT1-202ENST00000441024 C9orf163Q8N9P6 203 aa4.19□□□□□ -1.74
CNOT1-202ENST00000441024 FAM229AH3BQW9 127 aa4.19□□□□□ -1.74
CNOT1-202ENST00000441024 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
CNOT1-202ENST00000441024 EPG5Q9HCE0 2579 aa4.18□□□□□ -1.74
CNOT1-202ENST00000441024 IGFL1Q6UW32 110 aa4.18□□□□□ -1.74
CNOT1-202ENST00000441024 Q8N377 158 aa4.18□□□□□ -1.74
CNOT1-202ENST00000441024 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms