RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 LINC01556Q5JQF7 62 aa8.86□□□□□ -0.99
HERPUD1-204ENST00000439977 NKAPP1Q8N9T2 125 aa8.86□□□□□ -0.99
HERPUD1-204ENST00000439977 MRAPQ8TCY5 172 aa8.86□□□□□ -0.99
HERPUD1-204ENST00000439977 C3orf84H3BNL1 204 aa8.84□□□□□ -0.99
HERPUD1-204ENST00000439977 C7orf33Q8WU49 177 aa8.84□□□□□ -0.99
HERPUD1-204ENST00000439977 J3KT08 172 aa8.84□□□□□ -0.99
HERPUD1-204ENST00000439977 PDE6GP18545 87 aa8.84□□□□□ -0.99
HERPUD1-204ENST00000439977 CMYA5Q8N3K9 4069 aa8.84□□□□□ -1
HERPUD1-204ENST00000439977 CSMD3Q7Z407 3707 aa8.83□□□□□ -1
HERPUD1-204ENST00000439977 DPH3Q96FX2 82 aa8.83□□□□□ -1
HERPUD1-204ENST00000439977 SNURFQ9Y675 71 aa8.83□□□□□ -1
HERPUD1-204ENST00000439977 FAM19A5Q7Z5A7 132 aaPredicted RBP8.83□□□□□ -1
HERPUD1-204ENST00000439977 TMEM258P61165 79 aa8.82□□□□□ -1
HERPUD1-204ENST00000439977 TRBV7-6A0A0J9YX20 115 aa8.81□□□□□ -1
HERPUD1-204ENST00000439977 OXTP01178 125 aa8.81□□□□□ -1
HERPUD1-204ENST00000439977 LINC00588Q9Y4M8 146 aa8.81□□□□□ -1
HERPUD1-204ENST00000439977 LYSTQ99698 3801 aa8.8□□□□□ -1
HERPUD1-204ENST00000439977 MGAM2Q2M2H8 2515 aa8.8□□□□□ -1
HERPUD1-204ENST00000439977 H3BQ85 93 aa8.8□□□□□ -1
HERPUD1-204ENST00000439977 TM2D3Q9BRN9 247 aa8.8□□□□□ -1
HERPUD1-204ENST00000439977 CXCL6P80162 114 aa8.79□□□□□ -1
HERPUD1-204ENST00000439977 Q8N377 158 aa8.79□□□□□ -1
HERPUD1-204ENST00000439977 ST20-AS1Q8NBB2 130 aa8.78□□□□□ -1
HERPUD1-204ENST00000439977 KCNQ1DNQ9H478 68 aa8.78□□□□□ -1
HERPUD1-204ENST00000439977 DNAH10OSP0CZ25 163 aa8.78□□□□□ -1
HERPUD1-204ENST00000439977 RMI2Q96E14 147 aa8.78□□□□□ -1
HERPUD1-204ENST00000439977 BPY2O14599 106 aa8.77□□□□□ -1
HERPUD1-204ENST00000439977 TRAV7A0A075B6U4 112 aa8.77□□□□□ -1.01
HERPUD1-204ENST00000439977 NREPQ16612 68 aa8.77□□□□□ -1.01
HERPUD1-204ENST00000439977 Q9BRP9 147 aa8.76□□□□□ -1.01
HERPUD1-204ENST00000439977 KRTAP7-1Q8IUC3 87 aa8.76□□□□□ -1.01
HERPUD1-204ENST00000439977 TENM2Q9NT68 2774 aa8.74□□□□□ -1.01
HERPUD1-204ENST00000439977 DNAH10Q8IVF4 4471 aa8.74□□□□□ -1.01
HERPUD1-204ENST00000439977 STAB2Q8WWQ8 2551 aa8.74□□□□□ -1.01
HERPUD1-204ENST00000439977 ETDCA0A1B0GVM5 59 aa8.74□□□□□ -1.01
HERPUD1-204ENST00000439977 ERC2-IT1O76042 136 aa8.74□□□□□ -1.01
HERPUD1-204ENST00000439977 H7BZZ5 65 aa8.73□□□□□ -1.01
HERPUD1-204ENST00000439977 A0A0G2JQZ4 141 aa8.73□□□□□ -1.01
HERPUD1-204ENST00000439977 A0A1W2PNN7 141 aa8.73□□□□□ -1.01
HERPUD1-204ENST00000439977 RPS28P62857 69 aaKnown RBP8.73□□□□□ -1.01
HERPUD1-204ENST00000439977 Q6ZRX8 168 aa8.73□□□□□ -1.01
HERPUD1-204ENST00000439977 SRRM2Q9UQ35 2752 aaKnown RBP8.72□□□□□ -1.01
HERPUD1-204ENST00000439977 IGLV1-50A0A075B6I6 118 aa8.72□□□□□ -1.01
HERPUD1-204ENST00000439977 UBE2BP63146 152 aa8.7□□□□□ -1.02
HERPUD1-204ENST00000439977 FAM236DA0A1B0GTK5 79 aa8.7□□□□□ -1.02
HERPUD1-204ENST00000439977 F8WEM9 126 aa8.7□□□□□ -1.02
HERPUD1-204ENST00000439977 FAM236CP0DP71 79 aa8.7□□□□□ -1.02
HERPUD1-204ENST00000439977 HUWE1Q7Z6Z7 4374 aaKnown RBP8.7□□□□□ -1.02
HERPUD1-204ENST00000439977 IGKV2-24A0A0C4DH68 120 aa8.7□□□□□ -1.02
HERPUD1-204ENST00000439977 IGKV4-1P06312 121 aa8.7□□□□□ -1.02
HERPUD1-204ENST00000439977 A0A1W2PNM2 257 aa8.69□□□□□ -1.02
HERPUD1-204ENST00000439977 KRTAP4-16G5E9R7 235 aaPredicted RBP8.69□□□□□ -1.02
HERPUD1-204ENST00000439977 MRPL55Q7Z7F7 128 aaKnown RBP8.69□□□□□ -1.02
HERPUD1-204ENST00000439977 COL7A1Q02388 2944 aa8.68□□□□□ -1.02
HERPUD1-204ENST00000439977 TLX1NBP0CAT3 122 aa8.68□□□□□ -1.02
HERPUD1-204ENST00000439977 C1orf137Q5JT78 98 aa8.68□□□□□ -1.02
HERPUD1-204ENST00000439977 DNAH1Q9P2D7 4330 aa8.68□□□□□ -1.02
HERPUD1-204ENST00000439977 DNAH3Q8TD57 4116 aa8.68□□□□□ -1.02
HERPUD1-204ENST00000439977 DHRS4-AS1Q9P1J3 65 aa8.68□□□□□ -1.02
HERPUD1-204ENST00000439977 IGLV5-48A0A075B6I7 105 aa8.67□□□□□ -1.02
HERPUD1-204ENST00000439977 F8WDY8 70 aa8.67□□□□□ -1.02
HERPUD1-204ENST00000439977 C4orf26Q17RF5 130 aa8.67□□□□□ -1.02
HERPUD1-204ENST00000439977 KLKP1Q107X0 134 aa8.67□□□□□ -1.02
HERPUD1-204ENST00000439977 FUSP35637 526 aaKnown RBP eCLIP8.66□□□□□ -1.02
HERPUD1-204ENST00000439977 K7EIL1 84 aa8.66□□□□□ -1.02
HERPUD1-204ENST00000439977 BCE1O60756 84 aa8.65□□□□□ -1.02
HERPUD1-204ENST00000439977 KRTAP1-5Q9BYS1 174 aa8.65□□□□□ -1.03
HERPUD1-204ENST00000439977 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.64□□□□□ -1.03
HERPUD1-204ENST00000439977 PRYO14603 147 aa8.64□□□□□ -1.03
HERPUD1-204ENST00000439977 PRLHP81277 87 aa8.64□□□□□ -1.03
HERPUD1-204ENST00000439977 SPRR1AP35321 89 aa8.64□□□□□ -1.03
HERPUD1-204ENST00000439977 TMEM254Q8TBM7 123 aa8.64□□□□□ -1.03
HERPUD1-204ENST00000439977 PLA2G2DQ9UNK4 145 aa8.64□□□□□ -1.03
HERPUD1-204ENST00000439977 DEFB116Q30KQ4 102 aa8.63□□□□□ -1.03
HERPUD1-204ENST00000439977 HRCT1Q6UXD1 115 aa8.62□□□□□ -1.03
HERPUD1-204ENST00000439977 FAM30AQ9NZY2 134 aa8.62□□□□□ -1.03
HERPUD1-204ENST00000439977 DNAH9Q9NYC9 4486 aa8.62□□□□□ -1.03
HERPUD1-204ENST00000439977 A0A096LNI7 61 aa8.62□□□□□ -1.03
HERPUD1-204ENST00000439977 REG3GQ6UW15 175 aa8.62□□□□□ -1.03
HERPUD1-204ENST00000439977 Q5XG85 94 aa8.61□□□□□ -1.03
HERPUD1-204ENST00000439977 SMIM29Q86T20 159 aa8.61□□□□□ -1.03
HERPUD1-204ENST00000439977 TNP2Q05952 138 aa8.61□□□□□ -1.03
HERPUD1-204ENST00000439977 IGLV5-37A0A075B6J1 123 aa8.6□□□□□ -1.03
HERPUD1-204ENST00000439977 HIGD2AQ9BW72 106 aa8.6□□□□□ -1.03
HERPUD1-204ENST00000439977 PSCAO43653 123 aa8.6□□□□□ -1.03
HERPUD1-204ENST00000439977 Q8NBF4 154 aa8.6□□□□□ -1.03
HERPUD1-204ENST00000439977 OCR1Q9BZK8 76 aa8.6□□□□□ -1.03
HERPUD1-204ENST00000439977 CHTF8P0CG12 524 aa8.59□□□□□ -1.03
HERPUD1-204ENST00000439977 LINC00476Q8WZB0 136 aa8.58□□□□□ -1.04
HERPUD1-204ENST00000439977 K7EQZ3 153 aa8.57□□□□□ -1.04
HERPUD1-204ENST00000439977 SERP1Q9Y6X1 66 aa8.56□□□□□ -1.04
HERPUD1-204ENST00000439977 DNAH7Q8WXX0 4024 aa8.56□□□□□ -1.04
HERPUD1-204ENST00000439977 DSCR10P59022 87 aa8.56□□□□□ -1.04
HERPUD1-204ENST00000439977 EPM2AB3EWF7 344 aa8.55□□□□□ -1.04
HERPUD1-204ENST00000439977 KRTAP11-1Q8IUC1 163 aa8.55□□□□□ -1.04
HERPUD1-204ENST00000439977 UBE2DNLQ8IWF7 75 aa8.55□□□□□ -1.04
HERPUD1-204ENST00000439977 IGFL1Q6UW32 110 aa8.53□□□□□ -1.04
HERPUD1-204ENST00000439977 PHF5AQ7RTV0 110 aaKnown RBP8.53□□□□□ -1.04
HERPUD1-204ENST00000439977 LINC00474Q9P2X8 69 aa8.53□□□□□ -1.04
HERPUD1-204ENST00000439977 C5orf47Q569G3 176 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms