RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 ANAPC11Q9NYG5 84 aa5.05□□□□□ -1.6
HERPUD2-206ENST00000438224 HSPB8Q9UJY1 196 aa5.05□□□□□ -1.6
HERPUD2-206ENST00000438224 DPM2O94777 84 aa5.04□□□□□ -1.6
HERPUD2-206ENST00000438224 PLNP26678 52 aa5.04□□□□□ -1.6
HERPUD2-206ENST00000438224 MEIG1Q5JSS6 88 aa5.04□□□□□ -1.6
HERPUD2-206ENST00000438224 DAND5Q8N907 189 aa5.04□□□□□ -1.6
HERPUD2-206ENST00000438224 J3QQQ9 107 aa5.03□□□□□ -1.6
HERPUD2-206ENST00000438224 NCR3O14931 201 aa5.03□□□□□ -1.6
HERPUD2-206ENST00000438224 TSPAN13O95857 204 aa5.03□□□□□ -1.6
HERPUD2-206ENST00000438224 IGKCP01834 107 aa5.03□□□□□ -1.6
HERPUD2-206ENST00000438224 UBE2AP49459 152 aa5.03□□□□□ -1.6
HERPUD2-206ENST00000438224 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
HERPUD2-206ENST00000438224 KRTAP13-2Q52LG2 175 aa5.03□□□□□ -1.6
HERPUD2-206ENST00000438224 BOD1L2Q8IYS8 172 aa5.03□□□□□ -1.6
HERPUD2-206ENST00000438224 PLEKHB2Q96CS7 222 aa5.03□□□□□ -1.6
HERPUD2-206ENST00000438224 MYMXA0A1B0GTQ4 84 aa5.02□□□□□ -1.61
HERPUD2-206ENST00000438224 SYS1-DBNDD2H3BUS1 97 aa5.02□□□□□ -1.61
HERPUD2-206ENST00000438224 FAM19A1Q7Z5A9 133 aa5.02□□□□□ -1.61
HERPUD2-206ENST00000438224 LINC01545Q5VT33 79 aa5.01□□□□□ -1.61
HERPUD2-206ENST00000438224 SOSTDC1Q6X4U4 206 aa5.01□□□□□ -1.61
HERPUD2-206ENST00000438224 MAP1LC3CQ9BXW4 147 aa5.01□□□□□ -1.61
HERPUD2-206ENST00000438224 LOC107984156A0A0G2JMH3 177 aa5□□□□□ -1.61
HERPUD2-206ENST00000438224 TRBV10-3A0A0K0K1G6 114 aa5□□□□□ -1.61
HERPUD2-206ENST00000438224 KRTAP4-16G5E9R7 235 aaPredicted RBP5□□□□□ -1.61
HERPUD2-206ENST00000438224 COA6Q5JTJ3 125 aaKnown RBP5□□□□□ -1.61
HERPUD2-206ENST00000438224 ARL17AQ8IVW1 177 aa5□□□□□ -1.61
HERPUD2-206ENST00000438224 IGKV2D-26A0A0A0MRZ7 120 aa4.99□□□□□ -1.61
HERPUD2-206ENST00000438224 A0A0J9YXY3 114 aa4.99□□□□□ -1.61
HERPUD2-206ENST00000438224 E9PLD3 99 aa4.99□□□□□ -1.61
HERPUD2-206ENST00000438224 C3orf79P0CE67 100 aa4.99□□□□□ -1.61
HERPUD2-206ENST00000438224 CRYGAP11844 174 aa4.99□□□□□ -1.61
HERPUD2-206ENST00000438224 LGALS3P17931 250 aaKnown RBP4.99□□□□□ -1.61
HERPUD2-206ENST00000438224 SPRR1AP35321 89 aa4.99□□□□□ -1.61
HERPUD2-206ENST00000438224 HERVK_113P61574 105 aa4.99□□□□□ -1.61
HERPUD2-206ENST00000438224 ADAMTSL4-AS1Q5T5F5 129 aa4.99□□□□□ -1.61
HERPUD2-206ENST00000438224 TTTY13Q9BZ97 58 aa4.99□□□□□ -1.61
HERPUD2-206ENST00000438224 NMUP48645 174 aa4.98□□□□□ -1.61
HERPUD2-206ENST00000438224 TYMSOSQ8TAI1 123 aa4.98□□□□□ -1.61
HERPUD2-206ENST00000438224 LITAFQ99732 161 aa4.98□□□□□ -1.61
HERPUD2-206ENST00000438224 HIGD2AQ9BW72 106 aa4.98□□□□□ -1.61
HERPUD2-206ENST00000438224 KCNQ1DNQ9H478 68 aa4.98□□□□□ -1.61
HERPUD2-206ENST00000438224 LINC00587B1AMM8 73 aa4.97□□□□□ -1.61
HERPUD2-206ENST00000438224 NPC2P61916 151 aa4.97□□□□□ -1.61
HERPUD2-206ENST00000438224 FAM229BQ4G0N7 80 aa4.97□□□□□ -1.61
HERPUD2-206ENST00000438224 C3orf22Q8N5N4 141 aa4.97□□□□□ -1.61
HERPUD2-206ENST00000438224 LPAP08519 4548 aa4.97□□□□□ -1.61
HERPUD2-206ENST00000438224 LINC01547P58512 204 aaPredicted RBP4.96□□□□□ -1.62
HERPUD2-206ENST00000438224 VAMP3Q15836 100 aa4.96□□□□□ -1.62
HERPUD2-206ENST00000438224 LINC00337Q8N6G1 96 aa4.96□□□□□ -1.62
HERPUD2-206ENST00000438224 SMCR5Q8TEV8 140 aa4.96□□□□□ -1.62
HERPUD2-206ENST00000438224 SPRR4Q96PI1 79 aa4.96□□□□□ -1.62
HERPUD2-206ENST00000438224 TRBV10-2A0A0K0K1G8 114 aa4.95□□□□□ -1.62
HERPUD2-206ENST00000438224 ERC2-IT1O76042 136 aa4.95□□□□□ -1.62
HERPUD2-206ENST00000438224 DDTP30046 118 aa4.95□□□□□ -1.62
HERPUD2-206ENST00000438224 NDUFV3P56181 108 aaKnown RBP4.95□□□□□ -1.62
HERPUD2-206ENST00000438224 KRTDAPP60985 99 aa4.95□□□□□ -1.62
HERPUD2-206ENST00000438224 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
HERPUD2-206ENST00000438224 SPANXB1Q9NS25 103 aaPredicted RBP4.95□□□□□ -1.62
HERPUD2-206ENST00000438224 NDUFC2O95298 119 aa4.94□□□□□ -1.62
HERPUD2-206ENST00000438224 IGLV6-57P01721 117 aa4.94□□□□□ -1.62
HERPUD2-206ENST00000438224 PRR4Q16378 134 aa4.94□□□□□ -1.62
HERPUD2-206ENST00000438224 SMIM29Q86T20 159 aa4.94□□□□□ -1.62
HERPUD2-206ENST00000438224 LINC00304Q8N9R0 145 aa4.94□□□□□ -1.62
HERPUD2-206ENST00000438224 Q9BRP9 147 aa4.94□□□□□ -1.62
HERPUD2-206ENST00000438224 OCR1Q9BZK8 76 aa4.94□□□□□ -1.62
HERPUD2-206ENST00000438224 ETDCA0A1B0GVM5 59 aa4.93□□□□□ -1.62
HERPUD2-206ENST00000438224 A0A1B0GWB2 263 aa4.93□□□□□ -1.62
HERPUD2-206ENST00000438224 ZNF815PA8K554 130 aa4.93□□□□□ -1.62
HERPUD2-206ENST00000438224 ATOH7Q8N100 152 aa4.93□□□□□ -1.62
HERPUD2-206ENST00000438224 LINC00308Q8TCZ7 52 aa4.93□□□□□ -1.62
HERPUD2-206ENST00000438224 RETNLBQ9BQ08 111 aa4.93□□□□□ -1.62
HERPUD2-206ENST00000438224 MIEN1Q9BRT3 115 aa4.93□□□□□ -1.62
HERPUD2-206ENST00000438224 TIMM17BO60830 172 aa4.92□□□□□ -1.62
HERPUD2-206ENST00000438224 Q6ZRX8 168 aa4.92□□□□□ -1.62
HERPUD2-206ENST00000438224 S100A6P06703 90 aa4.91□□□□□ -1.62
HERPUD2-206ENST00000438224 LINC00483Q53H64 154 aa4.91□□□□□ -1.62
HERPUD2-206ENST00000438224 HIST3H2BBQ8N257 126 aa4.91□□□□□ -1.62
HERPUD2-206ENST00000438224 TRAV23DV6A0A075B6W5 121 aa4.9□□□□□ -1.63
HERPUD2-206ENST00000438224 S100A7L2Q5SY68 101 aa4.9□□□□□ -1.63
HERPUD2-206ENST00000438224 PCP2Q8IVA1 136 aa4.9□□□□□ -1.63
HERPUD2-206ENST00000438224 SPANXCQ9NY87 97 aa4.9□□□□□ -1.63
HERPUD2-206ENST00000438224 ZNF73O43830 326 aaPredicted RBP4.89□□□□□ -1.63
HERPUD2-206ENST00000438224 S100A1P23297 94 aa4.89□□□□□ -1.63
HERPUD2-206ENST00000438224 HIST1H2BLQ99880 126 aa4.89□□□□□ -1.63
HERPUD2-206ENST00000438224 ZNF706Q9Y5V0 76 aaPredicted RBP4.89□□□□□ -1.63
HERPUD2-206ENST00000438224 Q8NBF4 154 aa4.88□□□□□ -1.63
HERPUD2-206ENST00000438224 SPANXDQ9BXN6 97 aa4.88□□□□□ -1.63
HERPUD2-206ENST00000438224 RNF213Q63HN8 5207 aa4.88□□□□□ -1.63
HERPUD2-206ENST00000438224 C20orf202A1L168 122 aa4.87□□□□□ -1.63
HERPUD2-206ENST00000438224 S100A12P80511 92 aa4.87□□□□□ -1.63
HERPUD2-206ENST00000438224 ST20-AS1Q8NBB2 130 aa4.87□□□□□ -1.63
HERPUD2-206ENST00000438224 MOBPQ13875 183 aa4.86□□□□□ -1.63
HERPUD2-206ENST00000438224 OR13C6PQ8NH95 151 aa4.86□□□□□ -1.63
HERPUD2-206ENST00000438224 IGKV2-30P06310 120 aa4.85□□□□□ -1.63
HERPUD2-206ENST00000438224 SCGB1D4Q6XE38 83 aa4.85□□□□□ -1.63
HERPUD2-206ENST00000438224 CTAG1AP78358 180 aa4.84□□□□□ -1.63
HERPUD2-206ENST00000438224 C6orf99Q4VX62 202 aa4.84□□□□□ -1.63
HERPUD2-206ENST00000438224 MUSTN1Q8IVN3 82 aa4.84□□□□□ -1.63
HERPUD2-206ENST00000438224 IGLV7-46A0A075B6I9 117 aa4.83□□□□□ -1.64
HERPUD2-206ENST00000438224 IFITM1P13164 125 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms