RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 TMEM238LA0A1B0GVL6 79 aa9.4□□□□□ -0.9
CNOT9-205ENST00000433439 ETDCA0A1B0GVM5 59 aa9.4□□□□□ -0.9
CNOT9-205ENST00000433439 A6NJY4 79 aa9.4□□□□□ -0.9
CNOT9-205ENST00000433439 CTAG1AP78358 180 aa9.4□□□□□ -0.9
CNOT9-205ENST00000433439 PRLHP81277 87 aa9.4□□□□□ -0.9
CNOT9-205ENST00000433439 RAB37Q96AX2 223 aa9.4□□□□□ -0.9
CNOT9-205ENST00000433439 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
CNOT9-205ENST00000433439 CBY1Q9Y3M2 126 aa9.39□□□□□ -0.91
CNOT9-205ENST00000433439 H7C2G1 150 aa9.38□□□□□ -0.91
CNOT9-205ENST00000433439 ZNF73O43830 326 aaPredicted RBP9.38□□□□□ -0.91
CNOT9-205ENST00000433439 CFC1BP0CG36 223 aa9.38□□□□□ -0.91
CNOT9-205ENST00000433439 CFC1P0CG37 223 aa9.38□□□□□ -0.91
CNOT9-205ENST00000433439 INAFM2P0DMQ5 153 aa9.37□□□□□ -0.91
CNOT9-205ENST00000433439 RPL28P46779 137 aaKnown RBP9.37□□□□□ -0.91
CNOT9-205ENST00000433439 DIRC1Q969H9 104 aa9.37□□□□□ -0.91
CNOT9-205ENST00000433439 NHP2Q9NX24 153 aaKnown RBP9.37□□□□□ -0.91
CNOT9-205ENST00000433439 FAT1Q14517 4588 aa9.36□□□□□ -0.91
CNOT9-205ENST00000433439 ZNF861PO60384 105 aa9.36□□□□□ -0.91
CNOT9-205ENST00000433439 SPRR1AP35321 89 aa9.36□□□□□ -0.91
CNOT9-205ENST00000433439 HINT1P49773 126 aaPredicted RBP9.36□□□□□ -0.91
CNOT9-205ENST00000433439 C6orf99Q4VX62 202 aa9.36□□□□□ -0.91
CNOT9-205ENST00000433439 A0A0B4J2C4 111 aa9.35□□□□□ -0.91
CNOT9-205ENST00000433439 BVES-AS1Q5T3Y7 98 aa9.35□□□□□ -0.91
CNOT9-205ENST00000433439 SMIM11BQ8TCY0 68 aa9.35□□□□□ -0.91
CNOT9-205ENST00000433439 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
CNOT9-205ENST00000433439 Q1RN00 199 aa9.34□□□□□ -0.91
CNOT9-205ENST00000433439 SPINK6Q6UWN8 80 aa9.34□□□□□ -0.91
CNOT9-205ENST00000433439 B5MCH6 92 aa9.33□□□□□ -0.92
CNOT9-205ENST00000433439 KRTAP4-16G5E9R7 235 aaPredicted RBP9.33□□□□□ -0.92
CNOT9-205ENST00000433439 K7ERJ3 54 aa9.33□□□□□ -0.92
CNOT9-205ENST00000433439 M0R143 59 aa9.32□□□□□ -0.92
CNOT9-205ENST00000433439 KRTAP13-1Q8IUC0 172 aa9.32□□□□□ -0.92
CNOT9-205ENST00000433439 PRO1854Q9UHT4 67 aa9.32□□□□□ -0.92
CNOT9-205ENST00000433439 COX7BP24311 80 aa9.31□□□□□ -0.92
CNOT9-205ENST00000433439 BATFQ16520 125 aa9.31□□□□□ -0.92
CNOT9-205ENST00000433439 Q6ZRX8 168 aa9.31□□□□□ -0.92
CNOT9-205ENST00000433439 H0Y9J4 135 aa9.3□□□□□ -0.92
CNOT9-205ENST00000433439 SMCR5Q8TEV8 140 aa9.29□□□□□ -0.92
CNOT9-205ENST00000433439 VPS13BQ7Z7G8 4022 aa9.28□□□□□ -0.92
CNOT9-205ENST00000433439 A0A1B0GWB2 263 aa9.27□□□□□ -0.93
CNOT9-205ENST00000433439 PCP4L1A6NKN8 68 aa9.27□□□□□ -0.93
CNOT9-205ENST00000433439 ELOF1P60002 83 aaKnown RBP9.27□□□□□ -0.93
CNOT9-205ENST00000433439 VAMP3Q15836 100 aa9.27□□□□□ -0.93
CNOT9-205ENST00000433439 Q9BRP9 147 aa9.27□□□□□ -0.93
CNOT9-205ENST00000433439 ERC2-IT1O76042 136 aa9.26□□□□□ -0.93
CNOT9-205ENST00000433439 SRRM2Q9UQ35 2752 aaKnown RBP9.25□□□□□ -0.93
CNOT9-205ENST00000433439 TRBV7-6A0A0J9YX20 115 aa9.24□□□□□ -0.93
CNOT9-205ENST00000433439 PSMB2P49721 201 aa9.24□□□□□ -0.93
CNOT9-205ENST00000433439 TSPAN13O95857 204 aa9.23□□□□□ -0.93
CNOT9-205ENST00000433439 DHRS4-AS1Q9P1J3 65 aa9.23□□□□□ -0.93
CNOT9-205ENST00000433439 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
CNOT9-205ENST00000433439 SLC25A20O43772 301 aa9.21□□□□□ -0.94
CNOT9-205ENST00000433439 ANAPC11Q9NYG5 84 aa9.21□□□□□ -0.94
CNOT9-205ENST00000433439 TRIAP1O43715 76 aa9.2□□□□□ -0.94
CNOT9-205ENST00000433439 GAGE2AQ6NT46 116 aa9.2□□□□□ -0.94
CNOT9-205ENST00000433439 ST20-AS1Q8NBB2 130 aa9.2□□□□□ -0.94
CNOT9-205ENST00000433439 ZNF706Q9Y5V0 76 aaPredicted RBP9.2□□□□□ -0.94
CNOT9-205ENST00000433439 LINC00575Q6W349 94 aa9.19□□□□□ -0.94
CNOT9-205ENST00000433439 SPRR4Q96PI1 79 aa9.19□□□□□ -0.94
CNOT9-205ENST00000433439 KRTAP1-4P0C5Y4 121 aa9.18□□□□□ -0.94
CNOT9-205ENST00000433439 DEFB105AQ8NG35 78 aa9.18□□□□□ -0.94
CNOT9-205ENST00000433439 NAA38Q9BRA0 125 aaKnown RBP9.18□□□□□ -0.94
CNOT9-205ENST00000433439 hADV29S1A0JD25 119 aa9.17□□□□□ -0.94
CNOT9-205ENST00000433439 H0YGX0 51 aa9.17□□□□□ -0.94
CNOT9-205ENST00000433439 COX6CP09669 75 aa9.17□□□□□ -0.94
CNOT9-205ENST00000433439 SCGB1C2P0DMR2 95 aa9.17□□□□□ -0.94
CNOT9-205ENST00000433439 PRR26Q8N8Z3 221 aa9.16□□□□□ -0.94
CNOT9-205ENST00000433439 SNHG12Q9BXW3 62 aa9.16□□□□□ -0.94
CNOT9-205ENST00000433439 DMBT1Q9UGM3 2413 aaPredicted RBP9.16□□□□□ -0.94
CNOT9-205ENST00000433439 CLEC2BQ92478 149 aa9.15□□□□□ -0.94
CNOT9-205ENST00000433439 LINC01600Q96MT4 127 aa9.15□□□□□ -0.94
CNOT9-205ENST00000433439 FAM218AQ96MZ4 157 aa9.15□□□□□ -0.94
CNOT9-205ENST00000433439 OXTP01178 125 aa9.14□□□□□ -0.95
CNOT9-205ENST00000433439 PKHD1L1Q86WI1 4243 aa9.13□□□□□ -0.95
CNOT9-205ENST00000433439 J3QL48 77 aa9.13□□□□□ -0.95
CNOT9-205ENST00000433439 SNCGO76070 127 aa9.13□□□□□ -0.95
CNOT9-205ENST00000433439 A0A087X002 238 aa9.12□□□□□ -0.95
CNOT9-205ENST00000433439 KRTAP29-1A8MX34 341 aaPredicted RBP9.12□□□□□ -0.95
CNOT9-205ENST00000433439 CRYGAP11844 174 aa9.12□□□□□ -0.95
CNOT9-205ENST00000433439 Q6ZQY7 126 aa9.12□□□□□ -0.95
CNOT9-205ENST00000433439 H3BUT2 72 aa9.1□□□□□ -0.95
CNOT9-205ENST00000433439 FAM229BQ4G0N7 80 aa9.1□□□□□ -0.95
CNOT9-205ENST00000433439 IGLV9-49A0A0B4J1Y8 123 aa9.09□□□□□ -0.95
CNOT9-205ENST00000433439 TAX1BP3O14907 124 aa9.09□□□□□ -0.95
CNOT9-205ENST00000433439 LINC00483Q53H64 154 aa9.09□□□□□ -0.95
CNOT9-205ENST00000433439 C3orf22Q8N5N4 141 aa9.09□□□□□ -0.95
CNOT9-205ENST00000433439 TEX49A0A1B0GTD5 131 aa9.08□□□□□ -0.96
CNOT9-205ENST00000433439 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.08□□□□□ -0.96
CNOT9-205ENST00000433439 TYMSOSQ8TAI1 123 aa9.08□□□□□ -0.96
CNOT9-205ENST00000433439 C9orf118A6NHY6 69 aa9.07□□□□□ -0.96
CNOT9-205ENST00000433439 LINC01547P58512 204 aaPredicted RBP9.07□□□□□ -0.96
CNOT9-205ENST00000433439 KRTAP13-2Q52LG2 175 aa9.07□□□□□ -0.96
CNOT9-205ENST00000433439 COL5A1-AS1Q5SY13 56 aa9.07□□□□□ -0.96
CNOT9-205ENST00000433439 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
CNOT9-205ENST00000433439 IGLV5-48A0A075B6I7 105 aa9.06□□□□□ -0.96
CNOT9-205ENST00000433439 A0A1B0GX51 115 aa9.06□□□□□ -0.96
CNOT9-205ENST00000433439 DNAL4O96015 105 aa9.06□□□□□ -0.96
CNOT9-205ENST00000433439 MT1HL1P0DM35 61 aa9.06□□□□□ -0.96
CNOT9-205ENST00000433439 SPRR1BP22528 89 aa9.06□□□□□ -0.96
CNOT9-205ENST00000433439 C9orf153Q5TBE3 101 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 272.7 ms