RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 C9orf129Q5T035 196 aaKnown RBP7.65□□□□□ -1.18
CLDN4-202ENST00000431918 PMAIP1Q13794 54 aa7.65□□□□□ -1.18
CLDN4-202ENST00000431918 TENM3Q9P273 2699 aa7.65□□□□□ -1.19
CLDN4-202ENST00000431918 FBN1P35555 2871 aaKnown RBP7.65□□□□□ -1.19
CLDN4-202ENST00000431918 M0R378 163 aa7.64□□□□□ -1.19
CLDN4-202ENST00000431918 ANK3Q12955 4377 aaKnown RBP7.64□□□□□ -1.19
CLDN4-202ENST00000431918 LINC01556Q5JQF7 62 aa7.63□□□□□ -1.19
CLDN4-202ENST00000431918 LINC00575Q6W349 94 aa7.63□□□□□ -1.19
CLDN4-202ENST00000431918 ATP5EP2Q5VTU8 51 aa7.63□□□□□ -1.19
CLDN4-202ENST00000431918 TRAV7A0A075B6U4 112 aa7.62□□□□□ -1.19
CLDN4-202ENST00000431918 SCXQ7RTU7 201 aa7.62□□□□□ -1.19
CLDN4-202ENST00000431918 H3BNG1 76 aa7.62□□□□□ -1.19
CLDN4-202ENST00000431918 CCKP06307 115 aa7.62□□□□□ -1.19
CLDN4-202ENST00000431918 TRRAPQ9Y4A5 3859 aa7.61□□□□□ -1.19
CLDN4-202ENST00000431918 MRPL55Q7Z7F7 128 aaKnown RBP7.61□□□□□ -1.19
CLDN4-202ENST00000431918 LINC00588Q9Y4M8 146 aa7.61□□□□□ -1.19
CLDN4-202ENST00000431918 MUC7Q8TAX7 377 aa7.61□□□□□ -1.19
CLDN4-202ENST00000431918 Q8NDZ9 215 aa7.6□□□□□ -1.19
CLDN4-202ENST00000431918 H7BZZ5 65 aa7.6□□□□□ -1.19
CLDN4-202ENST00000431918 STAB2Q8WWQ8 2551 aa7.6□□□□□ -1.19
CLDN4-202ENST00000431918 K7EIL1 84 aa7.6□□□□□ -1.19
CLDN4-202ENST00000431918 Q6ZRP5 223 aa7.59□□□□□ -1.2
CLDN4-202ENST00000431918 C15orf56Q8N910 161 aa7.59□□□□□ -1.2
CLDN4-202ENST00000431918 FP248Q71RG6 208 aaPredicted RBP7.58□□□□□ -1.2
CLDN4-202ENST00000431918 M0R2N4 97 aa7.58□□□□□ -1.2
CLDN4-202ENST00000431918 PKD1L1Q8TDX9 2849 aa7.57□□□□□ -1.2
CLDN4-202ENST00000431918 NDUFC1O43677 76 aa7.57□□□□□ -1.2
CLDN4-202ENST00000431918 LRCOL1A6NCL2 159 aa7.57□□□□□ -1.2
CLDN4-202ENST00000431918 HIGD2AQ9BW72 106 aa7.56□□□□□ -1.2
CLDN4-202ENST00000431918 CASC10Q5T4H9 136 aa7.56□□□□□ -1.2
CLDN4-202ENST00000431918 C3orf84H3BNL1 204 aa7.56□□□□□ -1.2
CLDN4-202ENST00000431918 ATP5EP56381 51 aaPredicted RBP7.56□□□□□ -1.2
CLDN4-202ENST00000431918 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.55□□□□□ -1.2
CLDN4-202ENST00000431918 IGLV6-57P01721 117 aa7.55□□□□□ -1.2
CLDN4-202ENST00000431918 VPREB1P12018 145 aa7.55□□□□□ -1.2
CLDN4-202ENST00000431918 GVQW2A0A096LPI5 108 aaPredicted RBP7.55□□□□□ -1.2
CLDN4-202ENST00000431918 C7orf33Q8WU49 177 aa7.54□□□□□ -1.2
CLDN4-202ENST00000431918 FUSP35637 526 aaKnown RBP eCLIP7.54□□□□□ -1.2
CLDN4-202ENST00000431918 FAM168BA1KXE4 195 aa7.54□□□□□ -1.2
CLDN4-202ENST00000431918 NREPQ16612 68 aa7.54□□□□□ -1.2
CLDN4-202ENST00000431918 AKAP9Q99996 3911 aa7.54□□□□□ -1.2
CLDN4-202ENST00000431918 DNAH10OSP0CZ25 163 aa7.53□□□□□ -1.2
CLDN4-202ENST00000431918 SERTAD4-AS1Q5TG53 156 aa7.52□□□□□ -1.21
CLDN4-202ENST00000431918 PDE6GP18545 87 aa7.52□□□□□ -1.21
CLDN4-202ENST00000431918 H3BQ85 93 aa7.51□□□□□ -1.21
CLDN4-202ENST00000431918 A0A096LNI7 61 aa7.5□□□□□ -1.21
CLDN4-202ENST00000431918 C22orf24Q9Y442 160 aa7.5□□□□□ -1.21
CLDN4-202ENST00000431918 KLKP1Q107X0 134 aa7.5□□□□□ -1.21
CLDN4-202ENST00000431918 PSPHP1O15172 72 aa7.5□□□□□ -1.21
CLDN4-202ENST00000431918 ELOF1P60002 83 aaKnown RBP7.5□□□□□ -1.21
CLDN4-202ENST00000431918 LINC00167Q96N53 147 aa7.49□□□□□ -1.21
CLDN4-202ENST00000431918 TM2D3Q9BRN9 247 aa7.49□□□□□ -1.21
CLDN4-202ENST00000431918 SPTSSBQ8NFR3 76 aa7.48□□□□□ -1.21
CLDN4-202ENST00000431918 TMEM254Q8TBM7 123 aa7.48□□□□□ -1.21
CLDN4-202ENST00000431918 UBE2AP49459 152 aa7.47□□□□□ -1.21
CLDN4-202ENST00000431918 Q6ZVQ6 151 aa7.47□□□□□ -1.21
CLDN4-202ENST00000431918 MDFIQ99750 246 aa7.47□□□□□ -1.21
CLDN4-202ENST00000431918 Q6ZQT0 140 aa7.46□□□□□ -1.21
CLDN4-202ENST00000431918 LINC01547P58512 204 aaPredicted RBP7.46□□□□□ -1.21
CLDN4-202ENST00000431918 PRLHP81277 87 aa7.46□□□□□ -1.21
CLDN4-202ENST00000431918 DHRS4-AS1Q9P1J3 65 aa7.46□□□□□ -1.21
CLDN4-202ENST00000431918 CD164Q04900 197 aa7.46□□□□□ -1.22
CLDN4-202ENST00000431918 BPY2O14599 106 aa7.46□□□□□ -1.22
CLDN4-202ENST00000431918 C14orf177Q52M58 125 aa7.45□□□□□ -1.22
CLDN4-202ENST00000431918 Q8N9L7 120 aa7.44□□□□□ -1.22
CLDN4-202ENST00000431918 ST20-AS1Q8NBB2 130 aa7.44□□□□□ -1.22
CLDN4-202ENST00000431918 CHTF8P0CG12 524 aa7.44□□□□□ -1.22
CLDN4-202ENST00000431918 KRTAP26-1Q6PEX3 210 aa7.44□□□□□ -1.22
CLDN4-202ENST00000431918 REG3GQ6UW15 175 aa7.43□□□□□ -1.22
CLDN4-202ENST00000431918 LINC00528Q8N1L1 170 aa7.43□□□□□ -1.22
CLDN4-202ENST00000431918 PRYO14603 147 aa7.43□□□□□ -1.22
CLDN4-202ENST00000431918 BCE1O60756 84 aa7.43□□□□□ -1.22
CLDN4-202ENST00000431918 FAM229BQ4G0N7 80 aa7.42□□□□□ -1.22
CLDN4-202ENST00000431918 C1orf137Q5JT78 98 aa7.42□□□□□ -1.22
CLDN4-202ENST00000431918 PRR4Q16378 134 aa7.42□□□□□ -1.22
CLDN4-202ENST00000431918 OBSCN-AS1Q96MR7 158 aa7.41□□□□□ -1.22
CLDN4-202ENST00000431918 Q6ZRX8 168 aa7.4□□□□□ -1.22
CLDN4-202ENST00000431918 EPM2AB3EWF7 344 aa7.4□□□□□ -1.23
CLDN4-202ENST00000431918 NUPR2A6NF83 97 aa7.39□□□□□ -1.23
CLDN4-202ENST00000431918 KCNQ1DNQ9H478 68 aa7.39□□□□□ -1.23
CLDN4-202ENST00000431918 LOC110117498A0A087WWA1 95 aa7.38□□□□□ -1.23
CLDN4-202ENST00000431918 PRR15Q8IV56 129 aa7.38□□□□□ -1.23
CLDN4-202ENST00000431918 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
CLDN4-202ENST00000431918 IGLV1-50A0A075B6I6 118 aa7.37□□□□□ -1.23
CLDN4-202ENST00000431918 DEFB116Q30KQ4 102 aa7.37□□□□□ -1.23
CLDN4-202ENST00000431918 B9D2Q9BPU9 175 aa7.37□□□□□ -1.23
CLDN4-202ENST00000431918 A0A0G2JQZ4 141 aa7.36□□□□□ -1.23
CLDN4-202ENST00000431918 A0A1W2PNN7 141 aa7.36□□□□□ -1.23
CLDN4-202ENST00000431918 LY6G6CO95867 125 aa7.36□□□□□ -1.23
CLDN4-202ENST00000431918 Q8N377 158 aa7.35□□□□□ -1.23
CLDN4-202ENST00000431918 KRTAP1-5Q9BYS1 174 aa7.35□□□□□ -1.23
CLDN4-202ENST00000431918 CHKB-CPT1BH3BT56 60 aa7.35□□□□□ -1.23
CLDN4-202ENST00000431918 ERC2-IT1O76042 136 aa7.35□□□□□ -1.23
CLDN4-202ENST00000431918 NBDYA0A0U1RRE5 68 aa7.34□□□□□ -1.23
CLDN4-202ENST00000431918 CXCL6P80162 114 aa7.33□□□□□ -1.24
CLDN4-202ENST00000431918 TENM2Q9NT68 2774 aa7.33□□□□□ -1.24
CLDN4-202ENST00000431918 C16orf90A8MZG2 172 aa7.33□□□□□ -1.24
CLDN4-202ENST00000431918 TLX1NBP0CAT3 122 aa7.33□□□□□ -1.24
CLDN4-202ENST00000431918 TRBV7-4A0A0J9YYF1 115 aa7.33□□□□□ -1.24
CLDN4-202ENST00000431918 APLNQ9ULZ1 77 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms