RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ADAMTSL4-AS1Q5T5F5 129 aa7.92□□□□□ -1.14
SMARCE1-205ENST00000431889 HRCT1Q6UXD1 115 aa7.92□□□□□ -1.14
SMARCE1-205ENST00000431889 SPANXB1Q9NS25 103 aaPredicted RBP7.92□□□□□ -1.14
SMARCE1-205ENST00000431889 TRAV23DV6A0A075B6W5 121 aa7.91□□□□□ -1.14
SMARCE1-205ENST00000431889 DPM2O94777 84 aa7.91□□□□□ -1.14
SMARCE1-205ENST00000431889 TRBV10-2A0A0K0K1G8 114 aa7.9□□□□□ -1.14
SMARCE1-205ENST00000431889 IGLV6-57P01721 117 aa7.9□□□□□ -1.14
SMARCE1-205ENST00000431889 PLNP26678 52 aa7.9□□□□□ -1.14
SMARCE1-205ENST00000431889 LINC01547P58512 204 aaPredicted RBP7.9□□□□□ -1.14
SMARCE1-205ENST00000431889 SSBP3-AS1Q7Z2R9 100 aa7.9□□□□□ -1.14
SMARCE1-205ENST00000431889 LOC107984156A0A0G2JMH3 177 aa7.89□□□□□ -1.15
SMARCE1-205ENST00000431889 IGKCP01834 107 aa7.89□□□□□ -1.15
SMARCE1-205ENST00000431889 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
SMARCE1-205ENST00000431889 ARL17AQ8IVW1 177 aa7.89□□□□□ -1.15
SMARCE1-205ENST00000431889 A0A0J9YXY3 114 aa7.88□□□□□ -1.15
SMARCE1-205ENST00000431889 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-205ENST00000431889 HERVK_113P61574 105 aa7.88□□□□□ -1.15
SMARCE1-205ENST00000431889 SLC25A20O43772 301 aa7.88□□□□□ -1.15
SMARCE1-205ENST00000431889 ZNF73O43830 326 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-205ENST00000431889 HSPB8Q9UJY1 196 aa7.87□□□□□ -1.15
SMARCE1-205ENST00000431889 FSIP2Q5CZC0 6907 aa7.87□□□□□ -1.15
SMARCE1-205ENST00000431889 NDUFC2O95298 119 aa7.85□□□□□ -1.15
SMARCE1-205ENST00000431889 OR13C6PQ8NH95 151 aa7.85□□□□□ -1.15
SMARCE1-205ENST00000431889 C9orf92A6NGG3 77 aa7.84□□□□□ -1.15
SMARCE1-205ENST00000431889 NMUP48645 174 aa7.84□□□□□ -1.15
SMARCE1-205ENST00000431889 JOSD1Q15040 202 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1-205ENST00000431889 RPS29P62273 56 aaKnown RBP7.83□□□□□ -1.16
SMARCE1-205ENST00000431889 SLC7A5P1Q8MH63 180 aa7.83□□□□□ -1.16
SMARCE1-205ENST00000431889 TTTY13Q9BZ97 58 aa7.83□□□□□ -1.16
SMARCE1-205ENST00000431889 E9PLD3 99 aa7.81□□□□□ -1.16
SMARCE1-205ENST00000431889 DEFB105AQ8NG35 78 aa7.81□□□□□ -1.16
SMARCE1-205ENST00000431889 H7C2G1 150 aa7.8□□□□□ -1.16
SMARCE1-205ENST00000431889 LINC00308Q8TCZ7 52 aa7.8□□□□□ -1.16
SMARCE1-205ENST00000431889 LITAFQ99732 161 aa7.8□□□□□ -1.16
SMARCE1-205ENST00000431889 COLCA2A8K830 154 aa7.8□□□□□ -1.16
SMARCE1-205ENST00000431889 Q1RN00 199 aa7.8□□□□□ -1.16
SMARCE1-205ENST00000431889 PCOTHQ58A44 107 aa7.8□□□□□ -1.16
SMARCE1-205ENST00000431889 A0A0G2JQZ4 141 aa7.79□□□□□ -1.16
SMARCE1-205ENST00000431889 HINT1P49773 126 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-205ENST00000431889 IGLV8-61A0A075B6I0 122 aa7.76□□□□□ -1.17
SMARCE1-205ENST00000431889 SYS1-DBNDD2H3BUS1 97 aa7.76□□□□□ -1.17
SMARCE1-205ENST00000431889 SPANXCQ9NY87 97 aa7.76□□□□□ -1.17
SMARCE1-205ENST00000431889 ZNF815PA8K554 130 aa7.76□□□□□ -1.17
SMARCE1-205ENST00000431889 KRTAP19-2Q3LHN2 52 aa7.76□□□□□ -1.17
SMARCE1-205ENST00000431889 C6orf99Q4VX62 202 aa7.76□□□□□ -1.17
SMARCE1-205ENST00000431889 TAL2Q16559 108 aa7.75□□□□□ -1.17
SMARCE1-205ENST00000431889 SPRR1BP22528 89 aa7.74□□□□□ -1.17
SMARCE1-205ENST00000431889 COX7BP24311 80 aa7.74□□□□□ -1.17
SMARCE1-205ENST00000431889 LAMTOR3Q9UHA4 124 aa7.74□□□□□ -1.17
SMARCE1-205ENST00000431889 DHRS4-AS1Q9P1J3 65 aa7.73□□□□□ -1.17
SMARCE1-205ENST00000431889 MT1HP80294 61 aa7.72□□□□□ -1.17
SMARCE1-205ENST00000431889 LIMD2Q9BT23 127 aa7.72□□□□□ -1.17
SMARCE1-205ENST00000431889 ELOF1P60002 83 aaKnown RBP7.71□□□□□ -1.17
SMARCE1-205ENST00000431889 SPANXDQ9BXN6 97 aa7.71□□□□□ -1.17
SMARCE1-205ENST00000431889 HIST1H2BKO60814 126 aa7.71□□□□□ -1.18
SMARCE1-205ENST00000431889 HIST1H2BJP06899 126 aa7.71□□□□□ -1.18
SMARCE1-205ENST00000431889 HIST1H2BOP23527 126 aa7.71□□□□□ -1.18
SMARCE1-205ENST00000431889 HIST1H2BBP33778 126 aa7.71□□□□□ -1.18
SMARCE1-205ENST00000431889 HIST1H2BDP58876 126 aa7.71□□□□□ -1.18
SMARCE1-205ENST00000431889 HIST1H2BCP62807 126 aa7.71□□□□□ -1.18
SMARCE1-205ENST00000431889 HIST2H2BEQ16778 126 aa7.71□□□□□ -1.18
SMARCE1-205ENST00000431889 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-205ENST00000431889 LINC01545Q5VT33 79 aa7.71□□□□□ -1.18
SMARCE1-205ENST00000431889 HIST1H2BHQ93079 126 aa7.71□□□□□ -1.18
SMARCE1-205ENST00000431889 HIST1H2BNQ99877 126 aa7.71□□□□□ -1.18
SMARCE1-205ENST00000431889 HIST1H2BMQ99879 126 aa7.71□□□□□ -1.18
SMARCE1-205ENST00000431889 TIMM17BO60830 172 aa7.7□□□□□ -1.18
SMARCE1-205ENST00000431889 SLC25A34Q6PIV7 304 aa7.7□□□□□ -1.18
SMARCE1-205ENST00000431889 CRCT1Q9UGL9 99 aa7.69□□□□□ -1.18
SMARCE1-205ENST00000431889 CBY1Q9Y3M2 126 aa7.69□□□□□ -1.18
SMARCE1-205ENST00000431889 C5orf52A6NGY3 159 aa7.68□□□□□ -1.18
SMARCE1-205ENST00000431889 C3orf79P0CE67 100 aa7.68□□□□□ -1.18
SMARCE1-205ENST00000431889 LCE3BQ5TA77 95 aa7.68□□□□□ -1.18
SMARCE1-205ENST00000431889 SMIM29Q86T20 159 aa7.68□□□□□ -1.18
SMARCE1-205ENST00000431889 KRTDAPP60985 99 aa7.67□□□□□ -1.18
SMARCE1-205ENST00000431889 ATOH7Q8N100 152 aa7.67□□□□□ -1.18
SMARCE1-205ENST00000431889 PRO1933Q9H354 126 aa7.67□□□□□ -1.18
SMARCE1-205ENST00000431889 TEX49A0A1B0GTD5 131 aa7.67□□□□□ -1.18
SMARCE1-205ENST00000431889 A6NDN8 102 aa7.67□□□□□ -1.18
SMARCE1-205ENST00000431889 SCGB1D4Q6XE38 83 aa7.67□□□□□ -1.18
SMARCE1-205ENST00000431889 ANKRD39Q53RE8 183 aa7.66□□□□□ -1.18
SMARCE1-205ENST00000431889 PET117Q6UWS5 81 aa7.66□□□□□ -1.18
SMARCE1-205ENST00000431889 C1orf195Q5TG92 126 aa7.65□□□□□ -1.18
SMARCE1-205ENST00000431889 LINC00518Q8N0U6 118 aa7.65□□□□□ -1.18
SMARCE1-205ENST00000431889 MUSTN1Q8IVN3 82 aa7.63□□□□□ -1.19
SMARCE1-205ENST00000431889 AKR1D1P51857 326 aa7.63□□□□□ -1.19
SMARCE1-205ENST00000431889 PCP2Q8IVA1 136 aa7.63□□□□□ -1.19
SMARCE1-205ENST00000431889 CD164Q04900 197 aa7.61□□□□□ -1.19
SMARCE1-205ENST00000431889 A0A1B0GWB2 263 aa7.6□□□□□ -1.19
SMARCE1-205ENST00000431889 M0R2T5 61 aa7.59□□□□□ -1.19
SMARCE1-205ENST00000431889 KRTAP10-6P60371 365 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-205ENST00000431889 SMIM11BQ8TCY0 68 aa7.59□□□□□ -1.19
SMARCE1-205ENST00000431889 FLGP20930 4061 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-205ENST00000431889 IGLV5-48A0A075B6I7 105 aa7.59□□□□□ -1.2
SMARCE1-205ENST00000431889 RPL37P61927 97 aaKnown RBP7.58□□□□□ -1.2
SMARCE1-205ENST00000431889 TRBV7-6A0A0J9YX20 115 aa7.57□□□□□ -1.2
SMARCE1-205ENST00000431889 COX6B2Q6YFQ2 88 aa7.56□□□□□ -1.2
SMARCE1-205ENST00000431889 CFC1BP0CG36 223 aa7.54□□□□□ -1.2
SMARCE1-205ENST00000431889 IFITM1P13164 125 aa7.54□□□□□ -1.2
SMARCE1-205ENST00000431889 Q5XG85 94 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms