RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 GAGE10A6NGK3 116 aa11.5□□□□□ -0.57
HMGN1-206ENST00000431390 DPH3Q96FX2 82 aa11.5□□□□□ -0.57
HMGN1-206ENST00000431390 IGLV1-50A0A075B6I6 118 aa11.5□□□□□ -0.57
HMGN1-206ENST00000431390 KCNQ1DNQ9H478 68 aa11.5□□□□□ -0.57
HMGN1-206ENST00000431390 SPCS1Q9Y6A9 102 aa11.49□□□□□ -0.57
HMGN1-206ENST00000431390 TRBV20-1A0A075B6N2 111 aa11.48□□□□□ -0.57
HMGN1-206ENST00000431390 DNAH5Q8TE73 4624 aa11.48□□□□□ -0.57
HMGN1-206ENST00000431390 A0A087WYN8 130 aa11.47□□□□□ -0.57
HMGN1-206ENST00000431390 C6orf99Q4VX62 202 aa11.47□□□□□ -0.57
HMGN1-206ENST00000431390 Q8N1X5 172 aa11.47□□□□□ -0.57
HMGN1-206ENST00000431390 APOBP04114 4563 aaKnown RBP11.47□□□□□ -0.57
HMGN1-206ENST00000431390 H0YGX0 51 aa11.46□□□□□ -0.57
HMGN1-206ENST00000431390 K7EP34 96 aa11.46□□□□□ -0.57
HMGN1-206ENST00000431390 PRYO14603 147 aa11.46□□□□□ -0.57
HMGN1-206ENST00000431390 ZNF73O43830 326 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-206ENST00000431390 GTF2H5Q6ZYL4 71 aa11.46□□□□□ -0.57
HMGN1-206ENST00000431390 DIRC1Q969H9 104 aa11.46□□□□□ -0.57
HMGN1-206ENST00000431390 PLAC8Q9NZF1 115 aa11.46□□□□□ -0.57
HMGN1-206ENST00000431390 RPL37AP8A6NKH3 93 aa11.45□□□□□ -0.58
HMGN1-206ENST00000431390 TCL1BO95988 128 aa11.45□□□□□ -0.58
HMGN1-206ENST00000431390 PHF5AQ7RTV0 110 aaKnown RBP11.45□□□□□ -0.58
HMGN1-206ENST00000431390 TRBV7-6A0A0J9YX20 115 aa11.44□□□□□ -0.58
HMGN1-206ENST00000431390 KRTAP10-1P60331 282 aa11.44□□□□□ -0.58
HMGN1-206ENST00000431390 Q6ZSA8 131 aa11.44□□□□□ -0.58
HMGN1-206ENST00000431390 ATXN8Q156A1 80 aa11.42□□□□□ -0.58
HMGN1-206ENST00000431390 CLEC2BQ92478 149 aa11.42□□□□□ -0.58
HMGN1-206ENST00000431390 LST1O00453 97 aa11.41□□□□□ -0.58
HMGN1-206ENST00000431390 SPRR1AP35321 89 aa11.41□□□□□ -0.58
HMGN1-206ENST00000431390 UBE2BP63146 152 aa11.41□□□□□ -0.58
HMGN1-206ENST00000431390 FAM30AQ9NZY2 134 aa11.41□□□□□ -0.58
HMGN1-206ENST00000431390 UBE2V1Q13404 147 aa11.4□□□□□ -0.58
HMGN1-206ENST00000431390 HERC1Q15751 4861 aa11.39□□□□□ -0.59
HMGN1-206ENST00000431390 ELOF1P60002 83 aaKnown RBP11.39□□□□□ -0.59
HMGN1-206ENST00000431390 REG3GQ6UW15 175 aa11.39□□□□□ -0.59
HMGN1-206ENST00000431390 FAM218AQ96MZ4 157 aa11.39□□□□□ -0.59
HMGN1-206ENST00000431390 KRTAP4-16G5E9R7 235 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-206ENST00000431390 H3BMG7 143 aa11.38□□□□□ -0.59
HMGN1-206ENST00000431390 COX7BP24311 80 aa11.38□□□□□ -0.59
HMGN1-206ENST00000431390 A0A1B0GX51 115 aa11.37□□□□□ -0.59
HMGN1-206ENST00000431390 DNAH8Q96JB1 4490 aa11.37□□□□□ -0.59
HMGN1-206ENST00000431390 TRACP01848 142 aa11.37□□□□□ -0.59
HMGN1-206ENST00000431390 CIRBP-AS1Q8TBR5 109 aa11.37□□□□□ -0.59
HMGN1-206ENST00000431390 ETDCA0A1B0GVM5 59 aa11.36□□□□□ -0.59
HMGN1-206ENST00000431390 LINC00575Q6W349 94 aa11.36□□□□□ -0.59
HMGN1-206ENST00000431390 KRTAP11-1Q8IUC1 163 aa11.35□□□□□ -0.59
HMGN1-206ENST00000431390 LINC00528Q8N1L1 170 aa11.35□□□□□ -0.59
HMGN1-206ENST00000431390 SNCGO76070 127 aa11.34□□□□□ -0.59
HMGN1-206ENST00000431390 SCXQ7RTU7 201 aa11.34□□□□□ -0.59
HMGN1-206ENST00000431390 B5MCH6 92 aa11.33□□□□□ -0.6
HMGN1-206ENST00000431390 Q6ZRX8 168 aa11.33□□□□□ -0.6
HMGN1-206ENST00000431390 SLC25A20O43772 301 aa11.33□□□□□ -0.6
HMGN1-206ENST00000431390 hADV29S1A0JD25 119 aa11.32□□□□□ -0.6
HMGN1-206ENST00000431390 INAFM2P0DMQ5 153 aa11.32□□□□□ -0.6
HMGN1-206ENST00000431390 DNAL4O96015 105 aa11.31□□□□□ -0.6
HMGN1-206ENST00000431390 C9JAW5 83 aa11.29□□□□□ -0.6
HMGN1-206ENST00000431390 DHRS4-AS1Q9P1J3 65 aa11.29□□□□□ -0.6
HMGN1-206ENST00000431390 FAM19A1Q7Z5A9 133 aa11.28□□□□□ -0.6
HMGN1-206ENST00000431390 F8W1H4 67 aa11.28□□□□□ -0.6
HMGN1-206ENST00000431390 H0Y9J4 135 aa11.28□□□□□ -0.6
HMGN1-206ENST00000431390 BCE1O60756 84 aa11.28□□□□□ -0.6
HMGN1-206ENST00000431390 PRO0461Q9UI25 63 aa11.28□□□□□ -0.6
HMGN1-206ENST00000431390 Q9BRP9 147 aa11.26□□□□□ -0.61
HMGN1-206ENST00000431390 PSORS1C2Q9UIG4 136 aa11.26□□□□□ -0.61
HMGN1-206ENST00000431390 MTURNQ8N3F0 131 aa11.25□□□□□ -0.61
HMGN1-206ENST00000431390 H3BT86 120 aa11.24□□□□□ -0.61
HMGN1-206ENST00000431390 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-206ENST00000431390 DMBT1Q9UGM3 2413 aaPredicted RBP11.24□□□□□ -0.61
HMGN1-206ENST00000431390 HAMPP81172 84 aa11.24□□□□□ -0.61
HMGN1-206ENST00000431390 LINC01600Q96MT4 127 aa11.24□□□□□ -0.61
HMGN1-206ENST00000431390 ORMDL1Q9P0S3 153 aa11.24□□□□□ -0.61
HMGN1-206ENST00000431390 UBE2AP49459 152 aa11.23□□□□□ -0.61
HMGN1-206ENST00000431390 PRLHP81277 87 aa11.23□□□□□ -0.61
HMGN1-206ENST00000431390 SMCPP49901 116 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-206ENST00000431390 Q6ZQY7 126 aa11.22□□□□□ -0.61
HMGN1-206ENST00000431390 KRTAP13-1Q8IUC0 172 aa11.22□□□□□ -0.61
HMGN1-206ENST00000431390 ANKRD29Q8N6D5 301 aa11.22□□□□□ -0.61
HMGN1-206ENST00000431390 SMCR5Q8TEV8 140 aa11.22□□□□□ -0.61
HMGN1-206ENST00000431390 OCIAD2Q56VL3 154 aa11.21□□□□□ -0.61
HMGN1-206ENST00000431390 H3BQ85 93 aa11.2□□□□□ -0.62
HMGN1-206ENST00000431390 GHRHP01286 108 aa11.2□□□□□ -0.62
HMGN1-206ENST00000431390 BAALC-AS2P0C853 105 aa11.2□□□□□ -0.62
HMGN1-206ENST00000431390 C1orf137Q5JT78 98 aa11.2□□□□□ -0.62
HMGN1-206ENST00000431390 XGP55808 180 aa11.2□□□□□ -0.62
HMGN1-206ENST00000431390 Q5VSD8 79 aa11.2□□□□□ -0.62
HMGN1-206ENST00000431390 FAT1Q14517 4588 aa11.19□□□□□ -0.62
HMGN1-206ENST00000431390 HIGD2AQ9BW72 106 aa11.18□□□□□ -0.62
HMGN1-206ENST00000431390 TMEM256-PLSCR3K7ERE1 68 aa11.17□□□□□ -0.62
HMGN1-206ENST00000431390 ERC2-IT1O76042 136 aa11.17□□□□□ -0.62
HMGN1-206ENST00000431390 ZNF861PO60384 105 aa11.15□□□□□ -0.62
HMGN1-206ENST00000431390 IGLV7-43P04211 117 aa11.15□□□□□ -0.62
HMGN1-206ENST00000431390 VPS13BQ7Z7G8 4022 aa11.14□□□□□ -0.63
HMGN1-206ENST00000431390 PPDPFLQ8WWR9 84 aa11.14□□□□□ -0.63
HMGN1-206ENST00000431390 FLG2Q5D862 2391 aaPredicted RBP11.13□□□□□ -0.63
HMGN1-206ENST00000431390 MYCBP2O75592 4640 aa11.13□□□□□ -0.63
HMGN1-206ENST00000431390 IGLV5-48A0A075B6I7 105 aa11.13□□□□□ -0.63
HMGN1-206ENST00000431390 LINC01547P58512 204 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-206ENST00000431390 ETDBQ3ZM63 59 aa11.11□□□□□ -0.63
HMGN1-206ENST00000431390 TEN1Q86WV5 123 aa11.11□□□□□ -0.63
HMGN1-206ENST00000431390 ST20-AS1Q8NBB2 130 aa11.11□□□□□ -0.63
HMGN1-206ENST00000431390 SMR3BP02814 79 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms