RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 A0A0G2JQZ4 141 aa8.72□□□□□ -1.01
CDK12-201ENST00000430627 A0A1W2PNN7 141 aa8.72□□□□□ -1.01
CDK12-201ENST00000430627 LINC00846Q9NV44 126 aa8.71□□□□□ -1.01
CDK12-201ENST00000430627 LCE6AA0A183 80 aa8.71□□□□□ -1.01
CDK12-201ENST00000430627 A0A0C4DFX4 3053 aa8.7□□□□□ -1.02
CDK12-201ENST00000430627 COL27A1Q8IZC6 1860 aaPredicted RBP8.7□□□□□ -1.02
CDK12-201ENST00000430627 A0A096LNJ9 63 aa8.7□□□□□ -1.02
CDK12-201ENST00000430627 C8orf17Q9NRJ1 99 aa8.68□□□□□ -1.02
CDK12-201ENST00000430627 MKI67P46013 3256 aaKnown RBP8.68□□□□□ -1.02
CDK12-201ENST00000430627 LAMA3Q16787 3333 aa8.68□□□□□ -1.02
CDK12-201ENST00000430627 ABCA12Q86UK0 2595 aa8.67□□□□□ -1.02
CDK12-201ENST00000430627 LINC00483Q53H64 154 aa8.67□□□□□ -1.02
CDK12-201ENST00000430627 A0A1B0GVX0 72 aa8.66□□□□□ -1.02
CDK12-201ENST00000430627 IGFL1Q6UW32 110 aa8.66□□□□□ -1.02
CDK12-201ENST00000430627 VPREB1P12018 145 aa8.66□□□□□ -1.02
CDK12-201ENST00000430627 HRES1P13985 223 aa8.65□□□□□ -1.02
CDK12-201ENST00000430627 FN1P02751 2386 aaKnown RBP8.63□□□□□ -1.03
CDK12-201ENST00000430627 PTPRBP23467 1997 aa8.63□□□□□ -1.03
CDK12-201ENST00000430627 TRBV7-4A0A0J9YYF1 115 aa8.62□□□□□ -1.03
CDK12-201ENST00000430627 SPRR4Q96PI1 79 aa8.62□□□□□ -1.03
CDK12-201ENST00000430627 PLAC4Q8WY50 150 aa8.62□□□□□ -1.03
CDK12-201ENST00000430627 WIPF1O43516 503 aa8.6□□□□□ -1.03
CDK12-201ENST00000430627 TLX1NBP0CAT3 122 aa8.58□□□□□ -1.04
CDK12-201ENST00000430627 H3BPC8 53 aa8.58□□□□□ -1.04
CDK12-201ENST00000430627 KRTAP1-3Q8IUG1 177 aa8.58□□□□□ -1.04
CDK12-201ENST00000430627 SPTBN4Q9H254 2564 aa8.57□□□□□ -1.04
CDK12-201ENST00000430627 F8P00451 2351 aa8.56□□□□□ -1.04
CDK12-201ENST00000430627 OXTP01178 125 aa8.56□□□□□ -1.04
CDK12-201ENST00000430627 S4R3F8 94 aa8.56□□□□□ -1.04
CDK12-201ENST00000430627 LITAFQ99732 161 aa8.56□□□□□ -1.04
CDK12-201ENST00000430627 UNC80Q8N2C7 3258 aa8.55□□□□□ -1.04
CDK12-201ENST00000430627 FAM218AQ96MZ4 157 aa8.55□□□□□ -1.04
CDK12-201ENST00000430627 KCNQ1DNQ9H478 68 aa8.55□□□□□ -1.04
CDK12-201ENST00000430627 COX8CQ7Z4L0 72 aa8.55□□□□□ -1.04
CDK12-201ENST00000430627 KRTAP1-1Q07627 177 aa8.54□□□□□ -1.04
CDK12-201ENST00000430627 A0A1B0GW54 56 aa8.54□□□□□ -1.04
CDK12-201ENST00000430627 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.54□□□□□ -1.04
CDK12-201ENST00000430627 DNAH14Q0VDD8 3507 aa8.54□□□□□ -1.04
CDK12-201ENST00000430627 A0A096LNT2 108 aa8.54□□□□□ -1.04
CDK12-201ENST00000430627 XIRP2A4UGR9 3374 aa8.53□□□□□ -1.04
CDK12-201ENST00000430627 CSAG1Q6PB30 78 aa8.52□□□□□ -1.04
CDK12-201ENST00000430627 CNBPP62633 177 aaKnown RBP8.52□□□□□ -1.05
CDK12-201ENST00000430627 COA5Q86WW8 74 aa8.52□□□□□ -1.05
CDK12-201ENST00000430627 UQCR11O14957 56 aa8.51□□□□□ -1.05
CDK12-201ENST00000430627 USP9XQ93008 2570 aaPredicted RBP8.51□□□□□ -1.05
CDK12-201ENST00000430627 CDC42SE1Q9NRR8 79 aa8.5□□□□□ -1.05
CDK12-201ENST00000430627 SMCPP49901 116 aaPredicted RBP8.5□□□□□ -1.05
CDK12-201ENST00000430627 MIR22HGQ0VDD5 57 aa8.49□□□□□ -1.05
CDK12-201ENST00000430627 LAMA2P24043 3122 aaKnown RBP8.49□□□□□ -1.05
CDK12-201ENST00000430627 ANKRD11Q6UB99 2663 aaPredicted RBP8.49□□□□□ -1.05
CDK12-201ENST00000430627 PRR15Q8IV56 129 aa8.47□□□□□ -1.05
CDK12-201ENST00000430627 CDH23Q9H251 3354 aa8.47□□□□□ -1.05
CDK12-201ENST00000430627 PRRC2CQ9Y520 2896 aaKnown RBP8.47□□□□□ -1.05
CDK12-201ENST00000430627 LUZP6Q538Z0 58 aa8.46□□□□□ -1.05
CDK12-201ENST00000430627 TLN2Q9Y4G6 2542 aa8.46□□□□□ -1.06
CDK12-201ENST00000430627 LOC110117498A0A087WWA1 95 aa8.46□□□□□ -1.06
CDK12-201ENST00000430627 FAM104AQ969W3 186 aa8.46□□□□□ -1.06
CDK12-201ENST00000430627 PRR34Q9NV39 138 aa8.44□□□□□ -1.06
CDK12-201ENST00000430627 R4GN34 69 aa8.44□□□□□ -1.06
CDK12-201ENST00000430627 C4orf26Q17RF5 130 aa8.44□□□□□ -1.06
CDK12-201ENST00000430627 MTORP42345 2549 aa8.43□□□□□ -1.06
CDK12-201ENST00000430627 LCA10Q71F78 164 aa8.43□□□□□ -1.06
CDK12-201ENST00000430627 POLQO75417 2590 aa8.43□□□□□ -1.06
CDK12-201ENST00000430627 ERC2-IT1O76042 136 aa8.42□□□□□ -1.06
CDK12-201ENST00000430627 RPS28P62857 69 aaKnown RBP8.41□□□□□ -1.06
CDK12-201ENST00000430627 A8MUN3 132 aa8.41□□□□□ -1.06
CDK12-201ENST00000430627 GIG44P09565 113 aaPredicted RBP8.41□□□□□ -1.06
CDK12-201ENST00000430627 PKD1L2Q7Z442 2459 aa8.41□□□□□ -1.06
CDK12-201ENST00000430627 CFAP54Q96N23 3096 aa8.4□□□□□ -1.06
CDK12-201ENST00000430627 CEP295Q9C0D2 2601 aa8.4□□□□□ -1.07
CDK12-201ENST00000430627 SZT2Q5T011 3432 aa8.4□□□□□ -1.07
CDK12-201ENST00000430627 Q8N377 158 aa8.39□□□□□ -1.07
CDK12-201ENST00000430627 CHD7Q9P2D1 2997 aa8.39□□□□□ -1.07
CDK12-201ENST00000430627 HTTP42858 3142 aa8.39□□□□□ -1.07
CDK12-201ENST00000430627 EPG5Q9HCE0 2579 aa8.39□□□□□ -1.07
CDK12-201ENST00000430627 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
CDK12-201ENST00000430627 PRO0461Q9UI25 63 aa8.37□□□□□ -1.07
CDK12-201ENST00000430627 RANBP2P49792 3224 aaKnown RBP8.37□□□□□ -1.07
CDK12-201ENST00000430627 FLNBO75369 2602 aaKnown RBP8.36□□□□□ -1.07
CDK12-201ENST00000430627 ANKRD17O75179 2603 aaKnown RBP8.36□□□□□ -1.07
CDK12-201ENST00000430627 KRTAP10-2P60368 255 aa8.34□□□□□ -1.07
CDK12-201ENST00000430627 FAM229BQ4G0N7 80 aa8.33□□□□□ -1.08
CDK12-201ENST00000430627 CELSR3Q9NYQ7 3312 aa8.32□□□□□ -1.08
CDK12-201ENST00000430627 PCSK5Q92824 1860 aa8.31□□□□□ -1.08
CDK12-201ENST00000430627 CD164Q04900 197 aa8.31□□□□□ -1.08
CDK12-201ENST00000430627 PLAC8Q9NZF1 115 aa8.3□□□□□ -1.08
CDK12-201ENST00000430627 ZCCHC13Q8WW36 166 aaKnown RBP8.29□□□□□ -1.08
CDK12-201ENST00000430627 PRUNE2Q8WUY3 3088 aa8.28□□□□□ -1.08
CDK12-201ENST00000430627 HECTD1Q9ULT8 2610 aa8.28□□□□□ -1.08
CDK12-201ENST00000430627 M0QZ58 72 aa8.27□□□□□ -1.08
CDK12-201ENST00000430627 LINC01546A6NGU7 62 aa8.27□□□□□ -1.09
CDK12-201ENST00000430627 SETD2Q9BYW2 2564 aaPredicted RBP8.27□□□□□ -1.09
CDK12-201ENST00000430627 ACANP16112 2415 aa8.26□□□□□ -1.09
CDK12-201ENST00000430627 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
CDK12-201ENST00000430627 TRIOO75962 3097 aa8.22□□□□□ -1.09
CDK12-201ENST00000430627 A0A1W2PNM2 257 aa8.22□□□□□ -1.09
CDK12-201ENST00000430627 SPINK7P58062 85 aa8.21□□□□□ -1.09
CDK12-201ENST00000430627 VCANP13611 3396 aa8.21□□□□□ -1.1
CDK12-201ENST00000430627 H1FX-AS1Q4G0G2 97 aa8.21□□□□□ -1.1
CDK12-201ENST00000430627 FREM2Q5SZK8 3169 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms