RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 DPM2O94777 84 aa9.14□□□□□ -0.95
VARS-216ENST00000428445 TSPEAR-AS2P59090 65 aa9.14□□□□□ -0.95
VARS-216ENST00000428445 XP32Q5T750 250 aa9.14□□□□□ -0.95
VARS-216ENST00000428445 TRGC2P03986 189 aa9.12□□□□□ -0.95
VARS-216ENST00000428445 LGALS3P17931 250 aaKnown RBP9.12□□□□□ -0.95
VARS-216ENST00000428445 HINT1P49773 126 aaPredicted RBP9.12□□□□□ -0.95
VARS-216ENST00000428445 IGKCP01834 107 aa9.11□□□□□ -0.95
VARS-216ENST00000428445 TRAV23DV6A0A075B6W5 121 aa9.1□□□□□ -0.95
VARS-216ENST00000428445 KRTAP19-2Q3LHN2 52 aa9.1□□□□□ -0.95
VARS-216ENST00000428445 C9orf153Q5TBE3 101 aa9.1□□□□□ -0.95
VARS-216ENST00000428445 ST20-AS1Q8NBB2 130 aa9.1□□□□□ -0.95
VARS-216ENST00000428445 ZNF73O43830 326 aaPredicted RBP9.09□□□□□ -0.95
VARS-216ENST00000428445 SERF1AO75920 110 aa9.09□□□□□ -0.95
VARS-216ENST00000428445 LINC00310P59036 64 aa9.08□□□□□ -0.96
VARS-216ENST00000428445 SLC25A34Q6PIV7 304 aa9.07□□□□□ -0.96
VARS-216ENST00000428445 EIF4EBP3O60516 100 aaPredicted RBP9.06□□□□□ -0.96
VARS-216ENST00000428445 FABP4P15090 132 aa9.06□□□□□ -0.96
VARS-216ENST00000428445 NPC2P61916 151 aa9.06□□□□□ -0.96
VARS-216ENST00000428445 A0A0J9YXY3 114 aa9.05□□□□□ -0.96
VARS-216ENST00000428445 E9PLD3 99 aa9.05□□□□□ -0.96
VARS-216ENST00000428445 MT1HP80294 61 aa9.05□□□□□ -0.96
VARS-216ENST00000428445 HRCT1Q6UXD1 115 aa9.05□□□□□ -0.96
VARS-216ENST00000428445 SPRR1BP22528 89 aa9.04□□□□□ -0.96
VARS-216ENST00000428445 PCOTHQ58A44 107 aa9.04□□□□□ -0.96
VARS-216ENST00000428445 ADAMTSL4-AS1Q5T5F5 129 aa9.04□□□□□ -0.96
VARS-216ENST00000428445 SOSTDC1Q6X4U4 206 aa9.04□□□□□ -0.96
VARS-216ENST00000428445 DHRS4-AS1Q9P1J3 65 aa9.04□□□□□ -0.96
VARS-216ENST00000428445 C9orf92A6NGG3 77 aa9.03□□□□□ -0.96
VARS-216ENST00000428445 PMCHL2Q9BQD1 86 aa9.03□□□□□ -0.96
VARS-216ENST00000428445 SPANXCQ9NY87 97 aa9.03□□□□□ -0.96
VARS-216ENST00000428445 LIMD2Q9BT23 127 aa9.02□□□□□ -0.97
VARS-216ENST00000428445 IGLV8-61A0A075B6I0 122 aa9.01□□□□□ -0.97
VARS-216ENST00000428445 TIMM17BO60830 172 aa9.01□□□□□ -0.97
VARS-216ENST00000428445 LINC00518Q8N0U6 118 aa8.99□□□□□ -0.97
VARS-216ENST00000428445 LINC00308Q8TCZ7 52 aa8.99□□□□□ -0.97
VARS-216ENST00000428445 LAMTOR3Q9UHA4 124 aa8.99□□□□□ -0.97
VARS-216ENST00000428445 OR13C6PQ8NH95 151 aa8.98□□□□□ -0.97
VARS-216ENST00000428445 SPANXDQ9BXN6 97 aa8.98□□□□□ -0.97
VARS-216ENST00000428445 COLCA2A8K830 154 aa8.97□□□□□ -0.97
VARS-216ENST00000428445 CD164Q04900 197 aa8.97□□□□□ -0.97
VARS-216ENST00000428445 LITAFQ99732 161 aa8.97□□□□□ -0.97
VARS-216ENST00000428445 SYS1-DBNDD2H3BUS1 97 aa8.95□□□□□ -0.98
VARS-216ENST00000428445 TRBV7-6A0A0J9YX20 115 aa8.94□□□□□ -0.98
VARS-216ENST00000428445 ELOF1P60002 83 aaKnown RBP8.93□□□□□ -0.98
VARS-216ENST00000428445 H7C2G1 150 aa8.92□□□□□ -0.98
VARS-216ENST00000428445 LORP23490 312 aaPredicted RBP8.92□□□□□ -0.98
VARS-216ENST00000428445 COX7BP24311 80 aa8.92□□□□□ -0.98
VARS-216ENST00000428445 TAL2Q16559 108 aa8.92□□□□□ -0.98
VARS-216ENST00000428445 LINC01545Q5VT33 79 aa8.92□□□□□ -0.98
VARS-216ENST00000428445 Q5XG85 94 aa8.92□□□□□ -0.98
VARS-216ENST00000428445 PET117Q6UWS5 81 aa8.92□□□□□ -0.98
VARS-216ENST00000428445 PRO1933Q9H354 126 aa8.92□□□□□ -0.98
VARS-216ENST00000428445 TEX49A0A1B0GTD5 131 aa8.91□□□□□ -0.98
VARS-216ENST00000428445 KRTAP10-6P60371 365 aaPredicted RBP8.91□□□□□ -0.98
VARS-216ENST00000428445 COPS9Q8WXC6 57 aa8.91□□□□□ -0.98
VARS-216ENST00000428445 ZNF815PA8K554 130 aa8.9□□□□□ -0.98
VARS-216ENST00000428445 A0A0G2JQZ4 141 aa8.89□□□□□ -0.99
VARS-216ENST00000428445 AKR1D1P51857 326 aa8.89□□□□□ -0.99
VARS-216ENST00000428445 Q1RN00 199 aa8.89□□□□□ -0.99
VARS-216ENST00000428445 C6orf99Q4VX62 202 aa8.89□□□□□ -0.99
VARS-216ENST00000428445 DEFB105AQ8NG35 78 aa8.89□□□□□ -0.99
VARS-216ENST00000428445 CFC1BP0CG36 223 aa8.88□□□□□ -0.99
VARS-216ENST00000428445 FLGP20930 4061 aaPredicted RBP8.87□□□□□ -0.99
VARS-216ENST00000428445 A0A1B0GWB2 263 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 HIST1H2BKO60814 126 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 HIST1H2BJP06899 126 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 IFITM1P13164 125 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 HIST1H2BOP23527 126 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 HIST1H2BBP33778 126 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 HIST1H2BDP58876 126 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 HIST1H2BCP62807 126 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 HIST2H2BEQ16778 126 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.86□□□□□ -0.99
VARS-216ENST00000428445 Q6ZVH6 145 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 HIST1H2BHQ93079 126 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 HIST1H2BNQ99877 126 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 HIST1H2BMQ99879 126 aa8.86□□□□□ -0.99
VARS-216ENST00000428445 A4D1N5 150 aa8.85□□□□□ -0.99
VARS-216ENST00000428445 M0R2T5 61 aa8.84□□□□□ -0.99
VARS-216ENST00000428445 IGLV5-48A0A075B6I7 105 aa8.83□□□□□ -1
VARS-216ENST00000428445 SLC7A5P1Q8MH63 180 aa8.83□□□□□ -1
VARS-216ENST00000428445 C1orf195Q5TG92 126 aa8.82□□□□□ -1
VARS-216ENST00000428445 SCGB1D4Q6XE38 83 aa8.82□□□□□ -1
VARS-216ENST00000428445 SMIM29Q86T20 159 aa8.82□□□□□ -1
VARS-216ENST00000428445 TTTY13Q9BZ97 58 aa8.82□□□□□ -1
VARS-216ENST00000428445 C3orf79P0CE67 100 aa8.81□□□□□ -1
VARS-216ENST00000428445 NHP2Q9NX24 153 aaKnown RBP8.81□□□□□ -1
VARS-216ENST00000428445 A6NDN8 102 aa8.79□□□□□ -1
VARS-216ENST00000428445 TRAV13-2A0A0B4J235 113 aa8.78□□□□□ -1
VARS-216ENST00000428445 RPL37P61927 97 aaKnown RBP8.78□□□□□ -1
VARS-216ENST00000428445 COA6Q5JTJ3 125 aaKnown RBP8.78□□□□□ -1
VARS-216ENST00000428445 C20orf202A1L168 122 aa8.77□□□□□ -1.01
VARS-216ENST00000428445 TCL1BO95988 128 aa8.77□□□□□ -1.01
VARS-216ENST00000428445 COX6B2Q6YFQ2 88 aa8.77□□□□□ -1.01
VARS-216ENST00000428445 KRTDAPP60985 99 aa8.75□□□□□ -1.01
VARS-216ENST00000428445 MUSTN1Q8IVN3 82 aa8.75□□□□□ -1.01
VARS-216ENST00000428445 SNRPEP62304 92 aaKnown RBP8.73□□□□□ -1.01
VARS-216ENST00000428445 VAMP3Q15836 100 aa8.73□□□□□ -1.01
VARS-216ENST00000428445 ANKRD39Q53RE8 183 aa8.71□□□□□ -1.02
VARS-216ENST00000428445 SMIM11BQ8TCY0 68 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms