RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 TRGV2A0A075B6R0 118 aa3.4□□□□□ -1.86
RIF1-203ENST00000428287 IGLV1-51P01701 117 aa3.4□□□□□ -1.86
RIF1-203ENST00000428287 KCNQ1DNQ9H478 68 aa3.4□□□□□ -1.86
RIF1-203ENST00000428287 VPREB1P12018 145 aa3.4□□□□□ -1.86
RIF1-203ENST00000428287 TRGV4A0A0C4DH28 118 aa3.4□□□□□ -1.87
RIF1-203ENST00000428287 DSCR9P59020 149 aa3.4□□□□□ -1.87
RIF1-203ENST00000428287 C9orf116Q5BN46 136 aaPredicted RBP3.4□□□□□ -1.87
RIF1-203ENST00000428287 UNQ6190/PRO20217Q6UXQ8 127 aa3.4□□□□□ -1.87
RIF1-203ENST00000428287 LINC00269Q8N2A0 174 aa3.4□□□□□ -1.87
RIF1-203ENST00000428287 SPANXA2-OT1Q8N9U9 137 aa3.4□□□□□ -1.87
RIF1-203ENST00000428287 PHF5AQ7RTV0 110 aaKnown RBP3.39□□□□□ -1.87
RIF1-203ENST00000428287 KRTAP4-16G5E9R7 235 aaPredicted RBP3.39□□□□□ -1.87
RIF1-203ENST00000428287 ZNF73O43830 326 aaPredicted RBP3.39□□□□□ -1.87
RIF1-203ENST00000428287 C10orf25Q5T742 122 aa3.39□□□□□ -1.87
RIF1-203ENST00000428287 C18orf65Q6ZTR6 163 aa3.39□□□□□ -1.87
RIF1-203ENST00000428287 LOC101927531A0A1B0GV80 90 aa3.39□□□□□ -1.87
RIF1-203ENST00000428287 CYSRT1A8MQ03 144 aa3.39□□□□□ -1.87
RIF1-203ENST00000428287 DAD1P61803 113 aa3.39□□□□□ -1.87
RIF1-203ENST00000428287 Q8N377 158 aa3.39□□□□□ -1.87
RIF1-203ENST00000428287 Q8NBF4 154 aa3.38□□□□□ -1.87
RIF1-203ENST00000428287 SPAG11BQ08648 103 aa3.38□□□□□ -1.87
RIF1-203ENST00000428287 LYRM9A8MSI8 78 aa3.38□□□□□ -1.87
RIF1-203ENST00000428287 LINC01356Q8N9X3 169 aa3.38□□□□□ -1.87
RIF1-203ENST00000428287 CHCHD10Q8WYQ3 142 aaPredicted RBP3.38□□□□□ -1.87
RIF1-203ENST00000428287 TRAV22A0A0B4J277 110 aa3.38□□□□□ -1.87
RIF1-203ENST00000428287 SPRR1AP35321 89 aa3.38□□□□□ -1.87
RIF1-203ENST00000428287 Q8N9L7 120 aa3.37□□□□□ -1.87
RIF1-203ENST00000428287 PSCAO43653 123 aa3.37□□□□□ -1.87
RIF1-203ENST00000428287 LINC00588Q9Y4M8 146 aa3.37□□□□□ -1.87
RIF1-203ENST00000428287 ETDCA0A1B0GVM5 59 aa3.37□□□□□ -1.87
RIF1-203ENST00000428287 MPLKIPQ8TAP9 179 aa3.37□□□□□ -1.87
RIF1-203ENST00000428287 GYPEP15421 78 aa3.37□□□□□ -1.87
RIF1-203ENST00000428287 DSCR10P59022 87 aa3.37□□□□□ -1.87
RIF1-203ENST00000428287 Q8N9P0 234 aaPredicted RBP3.37□□□□□ -1.87
RIF1-203ENST00000428287 HIGD2AQ9BW72 106 aa3.36□□□□□ -1.87
RIF1-203ENST00000428287 C6orf48Q9UBA6 75 aa3.36□□□□□ -1.87
RIF1-203ENST00000428287 IGKV3OR2-268A0A0C4DH90 116 aa3.36□□□□□ -1.87
RIF1-203ENST00000428287 EGFEM1PQ0D2K5 195 aa3.36□□□□□ -1.87
RIF1-203ENST00000428287 A0A1W2PNM2 257 aa3.36□□□□□ -1.87
RIF1-203ENST00000428287 REG3AQ06141 175 aa3.36□□□□□ -1.87
RIF1-203ENST00000428287 LIMD2Q9BT23 127 aa3.36□□□□□ -1.87
RIF1-203ENST00000428287 ATP11AUNQ6ZP68 121 aa3.36□□□□□ -1.87
RIF1-203ENST00000428287 SYCNQ0VAF6 134 aa3.35□□□□□ -1.87
RIF1-203ENST00000428287 KPRPQ5T749 579 aaPredicted RBP3.35□□□□□ -1.87
RIF1-203ENST00000428287 Q5VV11 94 aa3.35□□□□□ -1.87
RIF1-203ENST00000428287 KRTAP26-1Q6PEX3 210 aa3.35□□□□□ -1.87
RIF1-203ENST00000428287 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.35□□□□□ -1.87
RIF1-203ENST00000428287 ANGP03950 147 aaKnown RBP3.35□□□□□ -1.87
RIF1-203ENST00000428287 KLK12Q9UKR0 248 aa3.35□□□□□ -1.87
RIF1-203ENST00000428287 Q9BRP9 147 aa3.34□□□□□ -1.87
RIF1-203ENST00000428287 H3BPC8 53 aa3.34□□□□□ -1.87
RIF1-203ENST00000428287 SCXQ7RTU7 201 aa3.34□□□□□ -1.87
RIF1-203ENST00000428287 RNASE1P07998 156 aaKnown RBP3.34□□□□□ -1.87
RIF1-203ENST00000428287 M0R378 163 aa3.34□□□□□ -1.87
RIF1-203ENST00000428287 LELP1Q5T871 98 aa3.34□□□□□ -1.87
RIF1-203ENST00000428287 KRTAP29-1A8MX34 341 aaPredicted RBP3.34□□□□□ -1.88
RIF1-203ENST00000428287 XAGE1AQ9HD64 81 aa3.33□□□□□ -1.88
RIF1-203ENST00000428287 CNBPP62633 177 aaKnown RBP3.33□□□□□ -1.88
RIF1-203ENST00000428287 HCG22E2RYF7 251 aa3.33□□□□□ -1.88
RIF1-203ENST00000428287 C9orf163Q8N9P6 203 aa3.33□□□□□ -1.88
RIF1-203ENST00000428287 CCL19Q99731 98 aa3.33□□□□□ -1.88
RIF1-203ENST00000428287 X6R8D5 127 aa3.33□□□□□ -1.88
RIF1-203ENST00000428287 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
RIF1-203ENST00000428287 PLA2G2DQ9UNK4 145 aa3.33□□□□□ -1.88
RIF1-203ENST00000428287 C16orf90A8MZG2 172 aa3.32□□□□□ -1.88
RIF1-203ENST00000428287 WFDC10AQ9H1F0 79 aa3.32□□□□□ -1.88
RIF1-203ENST00000428287 IGLV10-54A0A075B6I4 117 aa3.32□□□□□ -1.88
RIF1-203ENST00000428287 PLAC8Q9NZF1 115 aa3.32□□□□□ -1.88
RIF1-203ENST00000428287 IGKV2D-24A0A075B6R9 120 aa3.31□□□□□ -1.88
RIF1-203ENST00000428287 A8MU10 97 aa3.31□□□□□ -1.88
RIF1-203ENST00000428287 UBE2BP63146 152 aa3.31□□□□□ -1.88
RIF1-203ENST00000428287 CLPSL2Q6UWE3 100 aa3.31□□□□□ -1.88
RIF1-203ENST00000428287 SMIM29Q86T20 159 aa3.31□□□□□ -1.88
RIF1-203ENST00000428287 Q75L30 129 aa3.31□□□□□ -1.88
RIF1-203ENST00000428287 A8MUN3 132 aa3.31□□□□□ -1.88
RIF1-203ENST00000428287 C3orf84H3BNL1 204 aa3.31□□□□□ -1.88
RIF1-203ENST00000428287 TLX1NBP0CAT3 122 aa3.31□□□□□ -1.88
RIF1-203ENST00000428287 IGLV8-61A0A075B6I0 122 aa3.3□□□□□ -1.88
RIF1-203ENST00000428287 DEFB130BP0DP73 79 aa3.3□□□□□ -1.88
RIF1-203ENST00000428287 DEFB130AP0DP74 79 aa3.3□□□□□ -1.88
RIF1-203ENST00000428287 A0A096LPF7 62 aa3.3□□□□□ -1.88
RIF1-203ENST00000428287 UBE2AP49459 152 aa3.3□□□□□ -1.88
RIF1-203ENST00000428287 Q6ZRX8 168 aa3.3□□□□□ -1.88
RIF1-203ENST00000428287 IGLV5-37A0A075B6J1 123 aa3.3□□□□□ -1.88
RIF1-203ENST00000428287 C1orf137Q5JT78 98 aa3.3□□□□□ -1.88
RIF1-203ENST00000428287 PSPHP1O15172 72 aa3.3□□□□□ -1.88
RIF1-203ENST00000428287 LCA10Q71F78 164 aa3.3□□□□□ -1.88
RIF1-203ENST00000428287 ST20-AS1Q8NBB2 130 aa3.3□□□□□ -1.88
RIF1-203ENST00000428287 H3BNG1 76 aa3.29□□□□□ -1.88
RIF1-203ENST00000428287 K7EQZ3 153 aa3.29□□□□□ -1.88
RIF1-203ENST00000428287 ALMS1Q8TCU4 4167 aa3.29□□□□□ -1.88
RIF1-203ENST00000428287 LINC00208Q96KT6 92 aa3.29□□□□□ -1.88
RIF1-203ENST00000428287 ASB16-AS1Q495Z4 193 aa3.29□□□□□ -1.88
RIF1-203ENST00000428287 Q8NAQ8 132 aa3.29□□□□□ -1.88
RIF1-203ENST00000428287 DHRS4-AS1Q9P1J3 65 aa3.29□□□□□ -1.88
RIF1-203ENST00000428287 HECTD4Q9Y4D8 3996 aa3.28□□□□□ -1.88
RIF1-203ENST00000428287 C15orf56Q8N910 161 aa3.28□□□□□ -1.88
RIF1-203ENST00000428287 DNAH7Q8WXX0 4024 aa3.28□□□□□ -1.88
RIF1-203ENST00000428287 A6NN06 94 aa3.28□□□□□ -1.88
RIF1-203ENST00000428287 B9D2Q9BPU9 175 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms