RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 NDUFC2O95298 119 aa12.17□□□□□ -0.46
HSPG2-205ENST00000427897 NPC2P61916 151 aa12.17□□□□□ -0.46
HSPG2-205ENST00000427897 UBR4Q5T4S7 5183 aa12.16□□□□□ -0.46
HSPG2-205ENST00000427897 TRBV10-3A0A0K0K1G6 114 aa12.16□□□□□ -0.46
HSPG2-205ENST00000427897 IFITM1P13164 125 aa12.16□□□□□ -0.46
HSPG2-205ENST00000427897 KCNQ1DNQ9H478 68 aa12.16□□□□□ -0.46
HSPG2-205ENST00000427897 ZNF706Q9Y5V0 76 aaPredicted RBP12.16□□□□□ -0.46
HSPG2-205ENST00000427897 TRBV10-2A0A0K0K1G8 114 aa12.15□□□□□ -0.46
HSPG2-205ENST00000427897 S100A7L2Q5SY68 101 aa12.15□□□□□ -0.46
HSPG2-205ENST00000427897 SOSTDC1Q6X4U4 206 aa12.15□□□□□ -0.46
HSPG2-205ENST00000427897 LINC00337Q8N6G1 96 aa12.15□□□□□ -0.46
HSPG2-205ENST00000427897 PPDPFQ9H3Y8 114 aa12.15□□□□□ -0.46
HSPG2-205ENST00000427897 SPANXB1Q9NS25 103 aaPredicted RBP12.15□□□□□ -0.46
HSPG2-205ENST00000427897 DDTP30046 118 aa12.14□□□□□ -0.47
HSPG2-205ENST00000427897 KRTAP13-2Q52LG2 175 aa12.14□□□□□ -0.47
HSPG2-205ENST00000427897 SLC25A34Q6PIV7 304 aa12.14□□□□□ -0.47
HSPG2-205ENST00000427897 C14orf144Q96I85 54 aa12.14□□□□□ -0.47
HSPG2-205ENST00000427897 LINC00304Q8N9R0 145 aa12.12□□□□□ -0.47
HSPG2-205ENST00000427897 EIF4EBP3O60516 100 aaPredicted RBP12.11□□□□□ -0.47
HSPG2-205ENST00000427897 SMCR5Q8TEV8 140 aa12.11□□□□□ -0.47
HSPG2-205ENST00000427897 SPRR1AP35321 89 aa12.1□□□□□ -0.47
HSPG2-205ENST00000427897 LINC00518Q8N0U6 118 aa12.09□□□□□ -0.47
HSPG2-205ENST00000427897 SPRR4Q96PI1 79 aa12.09□□□□□ -0.47
HSPG2-205ENST00000427897 SMIM6P0DI80 62 aa12.08□□□□□ -0.48
HSPG2-205ENST00000427897 MUSTN1Q8IVN3 82 aa12.08□□□□□ -0.48
HSPG2-205ENST00000427897 HIGD1BQ9P298 99 aa12.08□□□□□ -0.48
HSPG2-205ENST00000427897 LRP2P98164 4655 aa12.07□□□□□ -0.48
HSPG2-205ENST00000427897 C4orf48Q5BLP8 95 aa12.06□□□□□ -0.48
HSPG2-205ENST00000427897 C3orf22Q8N5N4 141 aa12.06□□□□□ -0.48
HSPG2-205ENST00000427897 HIST1H4GQ99525 98 aa12.06□□□□□ -0.48
HSPG2-205ENST00000427897 CBY1Q9Y3M2 126 aa12.06□□□□□ -0.48
HSPG2-205ENST00000427897 B5MCH6 92 aa12.05□□□□□ -0.48
HSPG2-205ENST00000427897 KRTAP4-16G5E9R7 235 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-205ENST00000427897 HINT1P49773 126 aaPredicted RBP12.04□□□□□ -0.48
HSPG2-205ENST00000427897 TRAV23DV6A0A075B6W5 121 aa12.03□□□□□ -0.48
HSPG2-205ENST00000427897 LOC105371267A0A1B0GV96 52 aa12.03□□□□□ -0.48
HSPG2-205ENST00000427897 IGLV6-57P01721 117 aa12.03□□□□□ -0.48
HSPG2-205ENST00000427897 OR13C6PQ8NH95 151 aa12.03□□□□□ -0.48
HSPG2-205ENST00000427897 GAGE2AQ6NT46 116 aa12.01□□□□□ -0.49
HSPG2-205ENST00000427897 UQCR10Q9UDW1 63 aa12.01□□□□□ -0.49
HSPG2-205ENST00000427897 SPAG11AQ6PDA7 123 aa12□□□□□ -0.49
HSPG2-205ENST00000427897 C2orf91Q6ZV80 131 aa12□□□□□ -0.49
HSPG2-205ENST00000427897 CTAG1AP78358 180 aa11.99□□□□□ -0.49
HSPG2-205ENST00000427897 Q6ZRX8 168 aa11.99□□□□□ -0.49
HSPG2-205ENST00000427897 RETNLBQ9BQ08 111 aa11.99□□□□□ -0.49
HSPG2-205ENST00000427897 TAL2Q16559 108 aa11.98□□□□□ -0.49
HSPG2-205ENST00000427897 TRAV13-2A0A0B4J235 113 aa11.97□□□□□ -0.49
HSPG2-205ENST00000427897 ZNF73O43830 326 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-205ENST00000427897 A4D1N5 150 aa11.96□□□□□ -0.49
HSPG2-205ENST00000427897 A6NDN8 102 aa11.95□□□□□ -0.5
HSPG2-205ENST00000427897 ERC2-IT1O76042 136 aa11.95□□□□□ -0.5
HSPG2-205ENST00000427897 Q9BRP9 147 aa11.95□□□□□ -0.5
HSPG2-205ENST00000427897 IGLV9-49A0A0B4J1Y8 123 aa11.94□□□□□ -0.5
HSPG2-205ENST00000427897 Q8NBF4 154 aa11.94□□□□□ -0.5
HSPG2-205ENST00000427897 LPAP08519 4548 aa11.94□□□□□ -0.5
HSPG2-205ENST00000427897 LINC00483Q53H64 154 aa11.93□□□□□ -0.5
HSPG2-205ENST00000427897 TMEM238LA0A1B0GVL6 79 aa11.91□□□□□ -0.5
HSPG2-205ENST00000427897 A6NJY4 79 aa11.91□□□□□ -0.5
HSPG2-205ENST00000427897 HSD52Q0P140 79 aa11.91□□□□□ -0.5
HSPG2-205ENST00000427897 CEND1Q8N111 149 aa11.91□□□□□ -0.5
HSPG2-205ENST00000427897 MOBPQ13875 183 aa11.9□□□□□ -0.5
HSPG2-205ENST00000427897 C12orf57Q99622 126 aa11.9□□□□□ -0.5
HSPG2-205ENST00000427897 IGLV7-46A0A075B6I9 117 aa11.89□□□□□ -0.51
HSPG2-205ENST00000427897 PRO1933Q9H354 126 aa11.89□□□□□ -0.51
HSPG2-205ENST00000427897 SSBP3-AS1Q7Z2R9 100 aa11.88□□□□□ -0.51
HSPG2-205ENST00000427897 SPINK1P00995 79 aa11.87□□□□□ -0.51
HSPG2-205ENST00000427897 C9orf153Q5TBE3 101 aa11.86□□□□□ -0.51
HSPG2-205ENST00000427897 RAB37Q96AX2 223 aa11.86□□□□□ -0.51
HSPG2-205ENST00000427897 CDIP1Q9H305 208 aa11.86□□□□□ -0.51
HSPG2-205ENST00000427897 TSTD3H0UI37 97 aa11.85□□□□□ -0.51
HSPG2-205ENST00000427897 DHRS4-AS1Q9P1J3 65 aa11.85□□□□□ -0.51
HSPG2-205ENST00000427897 A0A0B4J2C4 111 aa11.84□□□□□ -0.51
HSPG2-205ENST00000427897 TRBV7-6A0A0J9YX20 115 aa11.84□□□□□ -0.51
HSPG2-205ENST00000427897 COX7BP24311 80 aa11.84□□□□□ -0.51
HSPG2-205ENST00000427897 C6orf99Q4VX62 202 aa11.84□□□□□ -0.51
HSPG2-205ENST00000427897 CFC1BP0CG36 223 aa11.83□□□□□ -0.52
HSPG2-205ENST00000427897 CFC1P0CG37 223 aa11.83□□□□□ -0.52
HSPG2-205ENST00000427897 ST20-AS1Q8NBB2 130 aa11.83□□□□□ -0.52
HSPG2-205ENST00000427897 RNF213Q63HN8 5207 aa11.82□□□□□ -0.52
HSPG2-205ENST00000427897 FXYD2P54710 66 aa11.82□□□□□ -0.52
HSPG2-205ENST00000427897 SMIM11BQ8TCY0 68 aa11.82□□□□□ -0.52
HSPG2-205ENST00000427897 ELOF1P60002 83 aaKnown RBP11.81□□□□□ -0.52
HSPG2-205ENST00000427897 A0A1B0GWB2 263 aa11.8□□□□□ -0.52
HSPG2-205ENST00000427897 VAMP3Q15836 100 aa11.8□□□□□ -0.52
HSPG2-205ENST00000427897 TPRXLQ17RH7 258 aa11.8□□□□□ -0.52
HSPG2-205ENST00000427897 FP248Q71RG6 208 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-205ENST00000427897 PRO1854Q9UHT4 67 aa11.78□□□□□ -0.52
HSPG2-205ENST00000427897 DEFB105AQ8NG35 78 aa11.76□□□□□ -0.53
HSPG2-205ENST00000427897 NHP2Q9NX24 153 aaKnown RBP11.76□□□□□ -0.53
HSPG2-205ENST00000427897 LAMTOR3Q9UHA4 124 aa11.76□□□□□ -0.53
HSPG2-205ENST00000427897 H7C2G1 150 aa11.75□□□□□ -0.53
HSPG2-205ENST00000427897 M0R143 59 aa11.75□□□□□ -0.53
HSPG2-205ENST00000427897 Q1RN00 199 aa11.74□□□□□ -0.53
HSPG2-205ENST00000427897 BVES-AS1Q5T3Y7 98 aa11.74□□□□□ -0.53
HSPG2-205ENST00000427897 RPS29P62273 56 aaKnown RBP11.73□□□□□ -0.53
HSPG2-205ENST00000427897 SLC25A20O43772 301 aa11.72□□□□□ -0.53
HSPG2-205ENST00000427897 A0A0U1RQV1 116 aa11.71□□□□□ -0.53
HSPG2-205ENST00000427897 SPRR1BP22528 89 aa11.7□□□□□ -0.54
HSPG2-205ENST00000427897 Q8N377 158 aa11.69□□□□□ -0.54
HSPG2-205ENST00000427897 TEX49A0A1B0GTD5 131 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms