RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ZNF861PO60384 105 aa3.87□□□□□ -1.79
HERC4-206ENST00000427635 ATRQ13535 2644 aa3.87□□□□□ -1.79
HERC4-206ENST00000427635 A0A087WVE0 104 aa3.87□□□□□ -1.79
HERC4-206ENST00000427635 TRANK1O15050 2925 aa3.87□□□□□ -1.79
HERC4-206ENST00000427635 ERC2-IT1O76042 136 aa3.86□□□□□ -1.79
HERC4-206ENST00000427635 KRTAP10-11P60412 298 aa3.86□□□□□ -1.79
HERC4-206ENST00000427635 MGAM2Q2M2H8 2515 aa3.86□□□□□ -1.79
HERC4-206ENST00000427635 CRIP3Q6Q6R5 217 aa3.86□□□□□ -1.79
HERC4-206ENST00000427635 A8MWP4 228 aa3.86□□□□□ -1.79
HERC4-206ENST00000427635 IGLV6-57P01721 117 aa3.86□□□□□ -1.79
HERC4-206ENST00000427635 TEP1Q99973 2627 aaKnown RBP3.86□□□□□ -1.79
HERC4-206ENST00000427635 USP9YO00507 2555 aaPredicted RBP3.86□□□□□ -1.79
HERC4-206ENST00000427635 FP248Q71RG6 208 aaPredicted RBP3.85□□□□□ -1.79
HERC4-206ENST00000427635 LINC00483Q53H64 154 aa3.85□□□□□ -1.79
HERC4-206ENST00000427635 SETD2Q9BYW2 2564 aaPredicted RBP3.85□□□□□ -1.79
HERC4-206ENST00000427635 OCR1Q9BZK8 76 aa3.84□□□□□ -1.79
HERC4-206ENST00000427635 CSNK1G2-AS1Q8NCQ2 148 aa3.84□□□□□ -1.79
HERC4-206ENST00000427635 COL4A2P08572 1712 aa3.84□□□□□ -1.79
HERC4-206ENST00000427635 IGLV7-43P04211 117 aa3.84□□□□□ -1.79
HERC4-206ENST00000427635 HRES1P13985 223 aa3.84□□□□□ -1.8
HERC4-206ENST00000427635 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.8
HERC4-206ENST00000427635 SORL1Q92673 2214 aa3.84□□□□□ -1.8
HERC4-206ENST00000427635 IGLV7-46A0A075B6I9 117 aa3.83□□□□□ -1.8
HERC4-206ENST00000427635 Q1T7F1 81 aa3.83□□□□□ -1.8
HERC4-206ENST00000427635 LINC01600Q96MT4 127 aa3.83□□□□□ -1.8
HERC4-206ENST00000427635 TRBV7-4A0A0J9YYF1 115 aa3.83□□□□□ -1.8
HERC4-206ENST00000427635 AGRNO00468 2067 aa3.83□□□□□ -1.8
HERC4-206ENST00000427635 NOTCH1P46531 2555 aa3.83□□□□□ -1.8
HERC4-206ENST00000427635 PSORS1C2Q9UIG4 136 aa3.83□□□□□ -1.8
HERC4-206ENST00000427635 FAM168BA1KXE4 195 aa3.82□□□□□ -1.8
HERC4-206ENST00000427635 SMCPP49901 116 aaPredicted RBP3.82□□□□□ -1.8
HERC4-206ENST00000427635 Q6ZQT0 140 aa3.82□□□□□ -1.8
HERC4-206ENST00000427635 C9orf129Q5T035 196 aaKnown RBP3.82□□□□□ -1.8
HERC4-206ENST00000427635 ZNF575Q86XF7 245 aa3.81□□□□□ -1.8
HERC4-206ENST00000427635 LINC00846Q9NV44 126 aa3.81□□□□□ -1.8
HERC4-206ENST00000427635 EML5Q05BV3 1969 aa3.81□□□□□ -1.8
HERC4-206ENST00000427635 C10orf142B7Z368 130 aa3.81□□□□□ -1.8
HERC4-206ENST00000427635 CDC42SE1Q9NRR8 79 aa3.81□□□□□ -1.8
HERC4-206ENST00000427635 A0A0C4DFX4 3053 aa3.81□□□□□ -1.8
HERC4-206ENST00000427635 HCFC1P51610 2035 aa3.81□□□□□ -1.8
HERC4-206ENST00000427635 IGLV1-50A0A075B6I6 118 aa3.81□□□□□ -1.8
HERC4-206ENST00000427635 K7EQZ3 153 aa3.81□□□□□ -1.8
HERC4-206ENST00000427635 URB1-AS1Q96HZ7 61 aa3.8□□□□□ -1.8
HERC4-206ENST00000427635 GOLGB1Q14789 3259 aaKnown RBP3.8□□□□□ -1.8
HERC4-206ENST00000427635 LOC110117498A0A087WWA1 95 aa3.8□□□□□ -1.8
HERC4-206ENST00000427635 UQCR11O14957 56 aa3.8□□□□□ -1.8
HERC4-206ENST00000427635 C8orf17Q9NRJ1 99 aa3.8□□□□□ -1.8
HERC4-206ENST00000427635 A0A1B0GVX0 72 aa3.79□□□□□ -1.8
HERC4-206ENST00000427635 CASC10Q5T4H9 136 aa3.79□□□□□ -1.8
HERC4-206ENST00000427635 COL27A1Q8IZC6 1860 aaPredicted RBP3.78□□□□□ -1.8
HERC4-206ENST00000427635 A0A0D9SG42 100 aa3.78□□□□□ -1.8
HERC4-206ENST00000427635 H7BZZ5 65 aa3.78□□□□□ -1.8
HERC4-206ENST00000427635 CFAP46Q8IYW2 2715 aa3.78□□□□□ -1.8
HERC4-206ENST00000427635 WDR87Q6ZQQ6 2873 aa3.78□□□□□ -1.8
HERC4-206ENST00000427635 NOTCH2NLQ7Z3S9 236 aa3.78□□□□□ -1.8
HERC4-206ENST00000427635 IGLV5-48A0A075B6I7 105 aa3.77□□□□□ -1.81
HERC4-206ENST00000427635 GCN1Q92616 2671 aaKnown RBP3.77□□□□□ -1.81
HERC4-206ENST00000427635 MIR22HGQ0VDD5 57 aa3.77□□□□□ -1.81
HERC4-206ENST00000427635 LINC00310P59036 64 aa3.76□□□□□ -1.81
HERC4-206ENST00000427635 COA5Q86WW8 74 aa3.76□□□□□ -1.81
HERC4-206ENST00000427635 UTRNP46939 3433 aa3.76□□□□□ -1.81
HERC4-206ENST00000427635 KLKP1Q107X0 134 aa3.76□□□□□ -1.81
HERC4-206ENST00000427635 KCNQ1DNQ9H478 68 aa3.76□□□□□ -1.81
HERC4-206ENST00000427635 USP24Q9UPU5 2620 aa3.75□□□□□ -1.81
HERC4-206ENST00000427635 IGFL1Q6UW32 110 aa3.75□□□□□ -1.81
HERC4-206ENST00000427635 C15orf56Q8N910 161 aa3.75□□□□□ -1.81
HERC4-206ENST00000427635 CENPFP49454 3210 aa3.75□□□□□ -1.81
HERC4-206ENST00000427635 ASB16-AS1Q495Z4 193 aa3.75□□□□□ -1.81
HERC4-206ENST00000427635 A6NN06 94 aa3.74□□□□□ -1.81
HERC4-206ENST00000427635 ANKRD17O75179 2603 aaKnown RBP3.74□□□□□ -1.81
HERC4-206ENST00000427635 LINC01546A6NGU7 62 aa3.74□□□□□ -1.81
HERC4-206ENST00000427635 TLX1NBP0CAT3 122 aa3.74□□□□□ -1.81
HERC4-206ENST00000427635 SPRR4Q96PI1 79 aa3.73□□□□□ -1.81
HERC4-206ENST00000427635 ANAPC11Q9NYG5 84 aa3.73□□□□□ -1.81
HERC4-206ENST00000427635 ARHGAP32A7KAX9 2087 aa3.73□□□□□ -1.81
HERC4-206ENST00000427635 KRTAP10-3P60369 221 aa3.73□□□□□ -1.81
HERC4-206ENST00000427635 LINC00612Q8N6U2 182 aa3.72□□□□□ -1.81
HERC4-206ENST00000427635 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
HERC4-206ENST00000427635 S4R3F8 94 aa3.72□□□□□ -1.81
HERC4-206ENST00000427635 CHD6Q8TD26 2715 aa3.72□□□□□ -1.81
HERC4-206ENST00000427635 PTPRBP23467 1997 aa3.72□□□□□ -1.81
HERC4-206ENST00000427635 FAM104AQ969W3 186 aa3.72□□□□□ -1.81
HERC4-206ENST00000427635 Q8N1X5 172 aa3.71□□□□□ -1.81
HERC4-206ENST00000427635 MUC4Q99102 2169 aa3.71□□□□□ -1.82
HERC4-206ENST00000427635 FAM229BQ4G0N7 80 aa3.71□□□□□ -1.82
HERC4-206ENST00000427635 Q5VSD8 79 aa3.7□□□□□ -1.82
HERC4-206ENST00000427635 PLAC4Q8WY50 150 aa3.7□□□□□ -1.82
HERC4-206ENST00000427635 CYSTM1Q9H1C7 97 aa3.7□□□□□ -1.82
HERC4-206ENST00000427635 CSAG1Q6PB30 78 aa3.7□□□□□ -1.82
HERC4-206ENST00000427635 A0A1W2PNN7 141 aa3.7□□□□□ -1.82
HERC4-206ENST00000427635 ADM2Q7Z4H4 148 aa3.7□□□□□ -1.82
HERC4-206ENST00000427635 NBEAL1Q6ZS30 2694 aa3.69□□□□□ -1.82
HERC4-206ENST00000427635 STAB1Q9NY15 2570 aa3.68□□□□□ -1.82
HERC4-206ENST00000427635 PRR34Q9NV39 138 aa3.68□□□□□ -1.82
HERC4-206ENST00000427635 A0A096LNJ9 63 aa3.68□□□□□ -1.82
HERC4-206ENST00000427635 PCNTO95613 3336 aa3.67□□□□□ -1.82
HERC4-206ENST00000427635 LCE6AA0A183 80 aa3.66□□□□□ -1.82
HERC4-206ENST00000427635 Q8N377 158 aa3.65□□□□□ -1.82
HERC4-206ENST00000427635 Q5VV11 94 aa3.65□□□□□ -1.83
HERC4-206ENST00000427635 PLXNB1O43157 2135 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms