RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 C7orf33Q8WU49 177 aa6.93□□□□□ -1.3
VPS37A-202ENST00000425020 TRAV7A0A075B6U4 112 aa6.93□□□□□ -1.3
VPS37A-202ENST00000425020 SPTSSBQ8NFR3 76 aa6.92□□□□□ -1.3
VPS37A-202ENST00000425020 LINC00208Q96KT6 92 aa6.91□□□□□ -1.3
VPS37A-202ENST00000425020 ST20-AS1Q8NBB2 130 aa6.91□□□□□ -1.3
VPS37A-202ENST00000425020 C22orf24Q9Y442 160 aa6.91□□□□□ -1.3
VPS37A-202ENST00000425020 A0A0G2JQZ4 141 aa6.9□□□□□ -1.31
VPS37A-202ENST00000425020 A0A1W2PNN7 141 aa6.9□□□□□ -1.31
VPS37A-202ENST00000425020 MRPL55Q7Z7F7 128 aaKnown RBP6.9□□□□□ -1.31
VPS37A-202ENST00000425020 FAM168BA1KXE4 195 aa6.9□□□□□ -1.31
VPS37A-202ENST00000425020 SPENQ96T58 3664 aaKnown RBP6.89□□□□□ -1.31
VPS37A-202ENST00000425020 Q6ZRP5 223 aa6.89□□□□□ -1.31
VPS37A-202ENST00000425020 KRTAP1-3Q8IUG1 177 aa6.89□□□□□ -1.31
VPS37A-202ENST00000425020 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
VPS37A-202ENST00000425020 REG3GQ6UW15 175 aa6.89□□□□□ -1.31
VPS37A-202ENST00000425020 TMEM254Q8TBM7 123 aa6.89□□□□□ -1.31
VPS37A-202ENST00000425020 LINC01561Q8N1V8 128 aa6.88□□□□□ -1.31
VPS37A-202ENST00000425020 TM2D3Q9BRN9 247 aa6.88□□□□□ -1.31
VPS37A-202ENST00000425020 KRTAP24-1Q3LI83 254 aa6.88□□□□□ -1.31
VPS37A-202ENST00000425020 KMT2BQ9UMN6 2715 aaPredicted RBP6.87□□□□□ -1.31
VPS37A-202ENST00000425020 Q6ZQT0 140 aa6.87□□□□□ -1.31
VPS37A-202ENST00000425020 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
VPS37A-202ENST00000425020 IL17DQ8TAD2 202 aa6.86□□□□□ -1.31
VPS37A-202ENST00000425020 LY6G6CO95867 125 aa6.86□□□□□ -1.31
VPS37A-202ENST00000425020 CHTF8P0CG12 524 aa6.86□□□□□ -1.31
VPS37A-202ENST00000425020 C4orf26Q17RF5 130 aa6.86□□□□□ -1.31
VPS37A-202ENST00000425020 SMIM29Q86T20 159 aa6.86□□□□□ -1.31
VPS37A-202ENST00000425020 C2orf48Q96LS8 159 aa6.86□□□□□ -1.31
VPS37A-202ENST00000425020 Q9BRP9 147 aa6.86□□□□□ -1.31
VPS37A-202ENST00000425020 PSPHP1O15172 72 aa6.85□□□□□ -1.31
VPS37A-202ENST00000425020 CHKB-CPT1BH3BT56 60 aa6.85□□□□□ -1.31
VPS37A-202ENST00000425020 PCOTHQ58A44 107 aa6.85□□□□□ -1.31
VPS37A-202ENST00000425020 SERTAD4-AS1Q5TG53 156 aa6.84□□□□□ -1.31
VPS37A-202ENST00000425020 PRYO14603 147 aa6.84□□□□□ -1.32
VPS37A-202ENST00000425020 CRYGAP11844 174 aa6.84□□□□□ -1.32
VPS37A-202ENST00000425020 LINC01556Q5JQF7 62 aa6.83□□□□□ -1.32
VPS37A-202ENST00000425020 VPREB1P12018 145 aa6.83□□□□□ -1.32
VPS37A-202ENST00000425020 ELOF1P60002 83 aaKnown RBP6.83□□□□□ -1.32
VPS37A-202ENST00000425020 RETNLBQ9BQ08 111 aa6.83□□□□□ -1.32
VPS37A-202ENST00000425020 KRTAP1-1Q07627 177 aa6.82□□□□□ -1.32
VPS37A-202ENST00000425020 LINC00588Q9Y4M8 146 aa6.82□□□□□ -1.32
VPS37A-202ENST00000425020 NDUFC1O43677 76 aa6.82□□□□□ -1.32
VPS37A-202ENST00000425020 SMIM26A0A096LP01 95 aa6.81□□□□□ -1.32
VPS37A-202ENST00000425020 RPL37AP61513 92 aaKnown RBP6.81□□□□□ -1.32
VPS37A-202ENST00000425020 IGHV6-1A0A0B4J1U7 121 aa6.81□□□□□ -1.32
VPS37A-202ENST00000425020 IGLV6-57P01721 117 aa6.8□□□□□ -1.32
VPS37A-202ENST00000425020 KRTAP10-11P60412 298 aa6.8□□□□□ -1.32
VPS37A-202ENST00000425020 PHF5AQ7RTV0 110 aaKnown RBP6.8□□□□□ -1.32
VPS37A-202ENST00000425020 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
VPS37A-202ENST00000425020 CASC10Q5T4H9 136 aa6.8□□□□□ -1.32
VPS37A-202ENST00000425020 CIRBP-AS1Q8TBR5 109 aa6.8□□□□□ -1.32
VPS37A-202ENST00000425020 SERP1Q9Y6X1 66 aa6.8□□□□□ -1.32
VPS37A-202ENST00000425020 TRBV7-6A0A0J9YX20 115 aa6.79□□□□□ -1.32
VPS37A-202ENST00000425020 CASC2Q6XLA1 102 aa6.78□□□□□ -1.32
VPS37A-202ENST00000425020 CXCL6P80162 114 aa6.78□□□□□ -1.32
VPS37A-202ENST00000425020 Q6ZRX8 168 aa6.77□□□□□ -1.33
VPS37A-202ENST00000425020 C15orf56Q8N910 161 aa6.77□□□□□ -1.33
VPS37A-202ENST00000425020 SVIPQ8NHG7 77 aa6.77□□□□□ -1.33
VPS37A-202ENST00000425020 Q8NDZ9 215 aa6.76□□□□□ -1.33
VPS37A-202ENST00000425020 LINC00476Q8WZB0 136 aa6.76□□□□□ -1.33
VPS37A-202ENST00000425020 PRR34Q9NV39 138 aa6.76□□□□□ -1.33
VPS37A-202ENST00000425020 A6NED7 52 aa6.75□□□□□ -1.33
VPS37A-202ENST00000425020 HCG22E2RYF7 251 aa6.75□□□□□ -1.33
VPS37A-202ENST00000425020 LOC110117498A0A087WWA1 95 aa6.74□□□□□ -1.33
VPS37A-202ENST00000425020 LINC00528Q8N1L1 170 aa6.74□□□□□ -1.33
VPS37A-202ENST00000425020 H0Y9P7 68 aa6.74□□□□□ -1.33
VPS37A-202ENST00000425020 LINC00612Q8N6U2 182 aa6.74□□□□□ -1.33
VPS37A-202ENST00000425020 DNAH10OSP0CZ25 163 aa6.73□□□□□ -1.33
VPS37A-202ENST00000425020 Q8NBF4 154 aa6.73□□□□□ -1.33
VPS37A-202ENST00000425020 LINC00474Q9P2X8 69 aa6.73□□□□□ -1.33
VPS37A-202ENST00000425020 MDFIQ99750 246 aa6.73□□□□□ -1.33
VPS37A-202ENST00000425020 K7EQZ3 153 aa6.72□□□□□ -1.33
VPS37A-202ENST00000425020 CSMD2Q7Z408 3487 aa6.72□□□□□ -1.33
VPS37A-202ENST00000425020 ERC2-IT1O76042 136 aa6.72□□□□□ -1.33
VPS37A-202ENST00000425020 Q8N377 158 aa6.72□□□□□ -1.33
VPS37A-202ENST00000425020 GVQW2A0A096LPI5 108 aaPredicted RBP6.71□□□□□ -1.34
VPS37A-202ENST00000425020 EPM2AB3EWF7 344 aa6.71□□□□□ -1.34
VPS37A-202ENST00000425020 PRR15LQ9BU68 103 aa6.71□□□□□ -1.34
VPS37A-202ENST00000425020 ATP5EP56381 51 aaPredicted RBP6.71□□□□□ -1.34
VPS37A-202ENST00000425020 CYSTM1Q9H1C7 97 aa6.7□□□□□ -1.34
VPS37A-202ENST00000425020 IGLV5-52A0A0A0MRZ9 124 aa6.7□□□□□ -1.34
VPS37A-202ENST00000425020 TRBV7-4A0A0J9YYF1 115 aa6.7□□□□□ -1.34
VPS37A-202ENST00000425020 MOBPQ13875 183 aa6.7□□□□□ -1.34
VPS37A-202ENST00000425020 TENM4Q6N022 2769 aa6.69□□□□□ -1.34
VPS37A-202ENST00000425020 FBN1P35555 2871 aaKnown RBP6.69□□□□□ -1.34
VPS37A-202ENST00000425020 H3BNG1 76 aa6.68□□□□□ -1.34
VPS37A-202ENST00000425020 C1orf64Q8NEQ6 169 aa6.68□□□□□ -1.34
VPS37A-202ENST00000425020 PDZD2O15018 2839 aa6.68□□□□□ -1.34
VPS37A-202ENST00000425020 ANAPC11Q9NYG5 84 aa6.68□□□□□ -1.34
VPS37A-202ENST00000425020 K7EIL1 84 aa6.67□□□□□ -1.34
VPS37A-202ENST00000425020 C1orf195Q5TG92 126 aa6.67□□□□□ -1.34
VPS37A-202ENST00000425020 IGLV1-50A0A075B6I6 118 aa6.66□□□□□ -1.34
VPS37A-202ENST00000425020 KCNQ1DNQ9H478 68 aa6.66□□□□□ -1.34
VPS37A-202ENST00000425020 NUPR2A6NF83 97 aa6.66□□□□□ -1.34
VPS37A-202ENST00000425020 SPINK1P00995 79 aa6.65□□□□□ -1.34
VPS37A-202ENST00000425020 PMAIP1Q13794 54 aa6.65□□□□□ -1.34
VPS37A-202ENST00000425020 OBSCN-AS1Q96MR7 158 aa6.65□□□□□ -1.34
VPS37A-202ENST00000425020 H7BZZ5 65 aa6.64□□□□□ -1.35
VPS37A-202ENST00000425020 A0A1W2PNM2 257 aa6.64□□□□□ -1.35
VPS37A-202ENST00000425020 RPS28P62857 69 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms