RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ELOF1P60002 83 aaKnown RBP7.19□□□□□ -1.26
PTCH1-206ENST00000421141 LINC00612Q8N6U2 182 aa7.18□□□□□ -1.26
PTCH1-206ENST00000421141 RETNLBQ9BQ08 111 aa7.18□□□□□ -1.26
PTCH1-206ENST00000421141 SPEGQ15772 3267 aa7.18□□□□□ -1.26
PTCH1-206ENST00000421141 MYO15AQ9UKN7 3530 aa7.18□□□□□ -1.26
PTCH1-206ENST00000421141 FAM240AA0A1B0GVK7 77 aa7.17□□□□□ -1.26
PTCH1-206ENST00000421141 UQCRQO14949 82 aa7.17□□□□□ -1.26
PTCH1-206ENST00000421141 PRR34Q9NV39 138 aa7.17□□□□□ -1.26
PTCH1-206ENST00000421141 NBEAQ8NFP9 2946 aa7.17□□□□□ -1.26
PTCH1-206ENST00000421141 ATP5EP56381 51 aaPredicted RBP7.17□□□□□ -1.26
PTCH1-206ENST00000421141 DEFB116Q30KQ4 102 aa7.17□□□□□ -1.26
PTCH1-206ENST00000421141 LINC00476Q8WZB0 136 aa7.17□□□□□ -1.26
PTCH1-206ENST00000421141 FAM168BA1KXE4 195 aa7.16□□□□□ -1.26
PTCH1-206ENST00000421141 WIPF1O43516 503 aa7.16□□□□□ -1.26
PTCH1-206ENST00000421141 MT-ATP8P03928 68 aa7.15□□□□□ -1.26
PTCH1-206ENST00000421141 A0A0U1RQV1 116 aa7.15□□□□□ -1.26
PTCH1-206ENST00000421141 COL12A1Q99715 3063 aa7.15□□□□□ -1.27
PTCH1-206ENST00000421141 FREM2Q5SZK8 3169 aa7.15□□□□□ -1.27
PTCH1-206ENST00000421141 A0A1B0GW54 56 aa7.14□□□□□ -1.27
PTCH1-206ENST00000421141 HCG22E2RYF7 251 aa7.14□□□□□ -1.27
PTCH1-206ENST00000421141 LINC00313P59037 77 aa7.13□□□□□ -1.27
PTCH1-206ENST00000421141 NOTCH1P46531 2555 aa7.13□□□□□ -1.27
PTCH1-206ENST00000421141 SERP2Q8N6R1 65 aa7.13□□□□□ -1.27
PTCH1-206ENST00000421141 C15orf56Q8N910 161 aa7.13□□□□□ -1.27
PTCH1-206ENST00000421141 KALRNO60229 2985 aa7.11□□□□□ -1.27
PTCH1-206ENST00000421141 SMR3BP02814 79 aaPredicted RBP7.11□□□□□ -1.27
PTCH1-206ENST00000421141 C9orf163Q8N9P6 203 aa7.11□□□□□ -1.27
PTCH1-206ENST00000421141 SNURFQ9Y675 71 aa7.11□□□□□ -1.27
PTCH1-206ENST00000421141 ZNF861PO60384 105 aa7.11□□□□□ -1.27
PTCH1-206ENST00000421141 IGLV6-57P01721 117 aa7.11□□□□□ -1.27
PTCH1-206ENST00000421141 ZNF575Q86XF7 245 aa7.11□□□□□ -1.27
PTCH1-206ENST00000421141 ATMQ13315 3056 aa7.11□□□□□ -1.27
PTCH1-206ENST00000421141 LINC00208Q96KT6 92 aa7.1□□□□□ -1.27
PTCH1-206ENST00000421141 ADGRG4Q8IZF6 3080 aa7.1□□□□□ -1.27
PTCH1-206ENST00000421141 CXCL6P80162 114 aa7.1□□□□□ -1.27
PTCH1-206ENST00000421141 NBEAL1Q6ZS30 2694 aa7.1□□□□□ -1.27
PTCH1-206ENST00000421141 Q6Q795 121 aa7.1□□□□□ -1.27
PTCH1-206ENST00000421141 ATP11AUNQ6ZP68 121 aa7.1□□□□□ -1.27
PTCH1-206ENST00000421141 H0Y9P7 68 aa7.1□□□□□ -1.27
PTCH1-206ENST00000421141 SPAG11AQ6PDA7 123 aa7.1□□□□□ -1.27
PTCH1-206ENST00000421141 LINC00304Q8N9R0 145 aa7.1□□□□□ -1.27
PTCH1-206ENST00000421141 V9GYY9 64 aa7.1□□□□□ -1.27
PTCH1-206ENST00000421141 IGKV2D-30A0A075B6S6 120 aa7.09□□□□□ -1.27
PTCH1-206ENST00000421141 IGKV2-30P06310 120 aa7.09□□□□□ -1.27
PTCH1-206ENST00000421141 VPREB1P12018 145 aa7.09□□□□□ -1.27
PTCH1-206ENST00000421141 SERTAD4-AS1Q5TG53 156 aa7.09□□□□□ -1.27
PTCH1-206ENST00000421141 CRYBG3Q68DQ2 2970 aa7.09□□□□□ -1.27
PTCH1-206ENST00000421141 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
PTCH1-206ENST00000421141 TRAV7A0A075B6U4 112 aa7.09□□□□□ -1.28
PTCH1-206ENST00000421141 ITPR1Q14643 2758 aa7.08□□□□□ -1.28
PTCH1-206ENST00000421141 ZZEF1O43149 2961 aa7.08□□□□□ -1.28
PTCH1-206ENST00000421141 CNBPP62633 177 aaKnown RBP7.08□□□□□ -1.28
PTCH1-206ENST00000421141 TLX1NBP0CAT3 122 aa7.08□□□□□ -1.28
PTCH1-206ENST00000421141 IGLV1-50A0A075B6I6 118 aa7.07□□□□□ -1.28
PTCH1-206ENST00000421141 SOSTDC1Q6X4U4 206 aa7.07□□□□□ -1.28
PTCH1-206ENST00000421141 hDV103S1A0JD37 113 aa7.06□□□□□ -1.28
PTCH1-206ENST00000421141 KCNQ1DNQ9H478 68 aa7.06□□□□□ -1.28
PTCH1-206ENST00000421141 PLA2G2DQ9UNK4 145 aa7.06□□□□□ -1.28
PTCH1-206ENST00000421141 UBR5O95071 2799 aaPredicted RBP7.06□□□□□ -1.28
PTCH1-206ENST00000421141 LINC00528Q8N1L1 170 aa7.06□□□□□ -1.28
PTCH1-206ENST00000421141 ST20-AS1Q8NBB2 130 aa7.05□□□□□ -1.28
PTCH1-206ENST00000421141 Q96NJ1 140 aa7.05□□□□□ -1.28
PTCH1-206ENST00000421141 C7orf65Q6ZTY9 151 aa7.04□□□□□ -1.28
PTCH1-206ENST00000421141 CDIP1Q9H305 208 aa7.04□□□□□ -1.28
PTCH1-206ENST00000421141 LOC400499M0QZD8 3231 aa7.03□□□□□ -1.28
PTCH1-206ENST00000421141 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
PTCH1-206ENST00000421141 WDFY3Q8IZQ1 3526 aa7.03□□□□□ -1.28
PTCH1-206ENST00000421141 COX7CP15954 63 aa7.02□□□□□ -1.29
PTCH1-206ENST00000421141 C9orf129Q5T035 196 aaKnown RBP7.02□□□□□ -1.29
PTCH1-206ENST00000421141 SSBP3-AS1Q7Z2R9 100 aa7.02□□□□□ -1.29
PTCH1-206ENST00000421141 APCP25054 2843 aa7.01□□□□□ -1.29
PTCH1-206ENST00000421141 TRBV7-4A0A0J9YYF1 115 aa7.01□□□□□ -1.29
PTCH1-206ENST00000421141 TNP2Q05952 138 aa7.01□□□□□ -1.29
PTCH1-206ENST00000421141 CFAP47Q6ZTR5 3102 aa7.01□□□□□ -1.29
PTCH1-206ENST00000421141 PCOTHQ58A44 107 aa7.01□□□□□ -1.29
PTCH1-206ENST00000421141 PSORS1C2Q9UIG4 136 aa7.01□□□□□ -1.29
PTCH1-206ENST00000421141 LOC110117498A0A087WWA1 95 aa7□□□□□ -1.29
PTCH1-206ENST00000421141 LINC00846Q9NV44 126 aa7□□□□□ -1.29
PTCH1-206ENST00000421141 NSD1Q96L73 2696 aaPredicted RBP7□□□□□ -1.29
PTCH1-206ENST00000421141 SPINK1P00995 79 aa7□□□□□ -1.29
PTCH1-206ENST00000421141 COX6B2Q6YFQ2 88 aa6.99□□□□□ -1.29
PTCH1-206ENST00000421141 C8orf87E5RJ46 101 aa6.99□□□□□ -1.29
PTCH1-206ENST00000421141 FAM218AQ96MZ4 157 aa6.99□□□□□ -1.29
PTCH1-206ENST00000421141 TACC2O95359 2948 aa6.98□□□□□ -1.29
PTCH1-206ENST00000421141 NBPF19A0A087WUL8 3843 aa6.98□□□□□ -1.29
PTCH1-206ENST00000421141 C1orf64Q8NEQ6 169 aa6.98□□□□□ -1.29
PTCH1-206ENST00000421141 NBEAL2Q6ZNJ1 2754 aa6.98□□□□□ -1.29
PTCH1-206ENST00000421141 Q6ZQT0 140 aa6.98□□□□□ -1.29
PTCH1-206ENST00000421141 FLG2Q5D862 2391 aaPredicted RBP6.97□□□□□ -1.29
PTCH1-206ENST00000421141 HIVEP1P15822 2718 aa6.96□□□□□ -1.3
PTCH1-206ENST00000421141 A6NED7 52 aa6.96□□□□□ -1.3
PTCH1-206ENST00000421141 A0A1W2PNN7 141 aa6.95□□□□□ -1.3
PTCH1-206ENST00000421141 ASPMQ8IZT6 3477 aa6.95□□□□□ -1.3
PTCH1-206ENST00000421141 DMDP11532 3685 aa6.95□□□□□ -1.3
PTCH1-206ENST00000421141 A0A087WVE0 104 aa6.95□□□□□ -1.3
PTCH1-206ENST00000421141 LITAFQ99732 161 aa6.94□□□□□ -1.3
PTCH1-206ENST00000421141 SMIM29Q86T20 159 aa6.94□□□□□ -1.3
PTCH1-206ENST00000421141 A8MWP4 228 aa6.94□□□□□ -1.3
PTCH1-206ENST00000421141 TRBV7-7A0A0K0K1E9 115 aa6.93□□□□□ -1.3
PTCH1-206ENST00000421141 ASH1LQ9NR48 2969 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms