RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 KRTAP1-4P0C5Y4 121 aa6.33□□□□□ -1.4
RFC1-203ENST00000418436 RPL28P46779 137 aaKnown RBP6.33□□□□□ -1.4
RFC1-203ENST00000418436 ATOH7Q8N100 152 aa6.33□□□□□ -1.4
RFC1-203ENST00000418436 TTTY13Q9BZ97 58 aa6.33□□□□□ -1.4
RFC1-203ENST00000418436 TMEM126AQ9H061 195 aa6.33□□□□□ -1.4
RFC1-203ENST00000418436 ZNF815PA8K554 130 aa6.32□□□□□ -1.4
RFC1-203ENST00000418436 TMEM238C9JI98 176 aa6.32□□□□□ -1.4
RFC1-203ENST00000418436 NDUFC2O95298 119 aa6.32□□□□□ -1.4
RFC1-203ENST00000418436 SOSTDC1Q6X4U4 206 aa6.32□□□□□ -1.4
RFC1-203ENST00000418436 TRBV10-2A0A0K0K1G8 114 aa6.31□□□□□ -1.4
RFC1-203ENST00000418436 NCR3O14931 201 aa6.31□□□□□ -1.4
RFC1-203ENST00000418436 MIEN1Q9BRT3 115 aa6.31□□□□□ -1.4
RFC1-203ENST00000418436 KCNQ1DNQ9H478 68 aa6.3□□□□□ -1.4
RFC1-203ENST00000418436 TRBV10-3A0A0K0K1G6 114 aa6.29□□□□□ -1.4
RFC1-203ENST00000418436 PRYO14603 147 aa6.29□□□□□ -1.4
RFC1-203ENST00000418436 SPRR1AP35321 89 aa6.29□□□□□ -1.4
RFC1-203ENST00000418436 UBE2AP49459 152 aa6.29□□□□□ -1.4
RFC1-203ENST00000418436 KRTAP5-3Q6L8H2 238 aa6.29□□□□□ -1.4
RFC1-203ENST00000418436 FAM19A1Q7Z5A9 133 aa6.29□□□□□ -1.4
RFC1-203ENST00000418436 PCP2Q8IVA1 136 aa6.29□□□□□ -1.4
RFC1-203ENST00000418436 LINC00308Q8TCZ7 52 aa6.29□□□□□ -1.4
RFC1-203ENST00000418436 SPANXB1Q9NS25 103 aaPredicted RBP6.29□□□□□ -1.4
RFC1-203ENST00000418436 KRTAP4-16G5E9R7 235 aaPredicted RBP6.28□□□□□ -1.4
RFC1-203ENST00000418436 NPC2P61916 151 aa6.28□□□□□ -1.4
RFC1-203ENST00000418436 PRLHP81277 87 aa6.28□□□□□ -1.4
RFC1-203ENST00000418436 LINC00337Q8N6G1 96 aa6.28□□□□□ -1.4
RFC1-203ENST00000418436 PRR26Q8N8Z3 221 aa6.28□□□□□ -1.4
RFC1-203ENST00000418436 IGLV6-57P01721 117 aa6.27□□□□□ -1.41
RFC1-203ENST00000418436 DDTP30046 118 aa6.27□□□□□ -1.41
RFC1-203ENST00000418436 SPANXDQ9BXN6 97 aa6.27□□□□□ -1.41
RFC1-203ENST00000418436 SPANXCQ9NY87 97 aa6.27□□□□□ -1.41
RFC1-203ENST00000418436 SCGB1D4Q6XE38 83 aa6.26□□□□□ -1.41
RFC1-203ENST00000418436 PPDPFQ9H3Y8 114 aa6.26□□□□□ -1.41
RFC1-203ENST00000418436 HSBP1L1C9JCN9 74 aa6.25□□□□□ -1.41
RFC1-203ENST00000418436 SCGB1D1O95968 90 aa6.25□□□□□ -1.41
RFC1-203ENST00000418436 Q6ZVH6 145 aa6.25□□□□□ -1.41
RFC1-203ENST00000418436 IFITM1P13164 125 aa6.24□□□□□ -1.41
RFC1-203ENST00000418436 RPL13AP40429 203 aaKnown RBP6.24□□□□□ -1.41
RFC1-203ENST00000418436 S100A12P80511 92 aa6.24□□□□□ -1.41
RFC1-203ENST00000418436 S100A7L2Q5SY68 101 aa6.24□□□□□ -1.41
RFC1-203ENST00000418436 B5MCH6 92 aa6.23□□□□□ -1.41
RFC1-203ENST00000418436 HMCN2Q8NDA2 5059 aa6.22□□□□□ -1.41
RFC1-203ENST00000418436 TRAV23DV6A0A075B6W5 121 aa6.22□□□□□ -1.41
RFC1-203ENST00000418436 A0A087X002 238 aa6.22□□□□□ -1.41
RFC1-203ENST00000418436 ETDCA0A1B0GVM5 59 aa6.22□□□□□ -1.41
RFC1-203ENST00000418436 FAM229BQ4G0N7 80 aa6.22□□□□□ -1.41
RFC1-203ENST00000418436 LINC00518Q8N0U6 118 aa6.22□□□□□ -1.41
RFC1-203ENST00000418436 COPS9Q8WXC6 57 aa6.22□□□□□ -1.41
RFC1-203ENST00000418436 HIGD2AQ9BW72 106 aa6.22□□□□□ -1.41
RFC1-203ENST00000418436 CRYGAP11844 174 aa6.21□□□□□ -1.42
RFC1-203ENST00000418436 JOSD1Q15040 202 aaPredicted RBP6.21□□□□□ -1.42
RFC1-203ENST00000418436 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
RFC1-203ENST00000418436 MUSTN1Q8IVN3 82 aa6.21□□□□□ -1.42
RFC1-203ENST00000418436 SMCR5Q8TEV8 140 aa6.21□□□□□ -1.42
RFC1-203ENST00000418436 ANAPC11Q9NYG5 84 aa6.21□□□□□ -1.42
RFC1-203ENST00000418436 ZNF73O43830 326 aaPredicted RBP6.2□□□□□ -1.42
RFC1-203ENST00000418436 Q6ZRX8 168 aa6.2□□□□□ -1.42
RFC1-203ENST00000418436 SPRR4Q96PI1 79 aa6.2□□□□□ -1.42
RFC1-203ENST00000418436 CBY1Q9Y3M2 126 aa6.2□□□□□ -1.42
RFC1-203ENST00000418436 COX8AP10176 69 aa6.19□□□□□ -1.42
RFC1-203ENST00000418436 KRTAP13-2Q52LG2 175 aa6.19□□□□□ -1.42
RFC1-203ENST00000418436 OR13C6PQ8NH95 151 aa6.19□□□□□ -1.42
RFC1-203ENST00000418436 Q9BRP9 147 aa6.19□□□□□ -1.42
RFC1-203ENST00000418436 DLEU1O43261 78 aa6.18□□□□□ -1.42
RFC1-203ENST00000418436 ZNF706Q9Y5V0 76 aaPredicted RBP6.18□□□□□ -1.42
RFC1-203ENST00000418436 ERC2-IT1O76042 136 aa6.17□□□□□ -1.42
RFC1-203ENST00000418436 TYMSOSQ8TAI1 123 aa6.17□□□□□ -1.42
RFC1-203ENST00000418436 LINC00483Q53H64 154 aa6.16□□□□□ -1.42
RFC1-203ENST00000418436 PAM16Q9Y3D7 125 aa6.16□□□□□ -1.42
RFC1-203ENST00000418436 HINT1P49773 126 aaPredicted RBP6.15□□□□□ -1.42
RFC1-203ENST00000418436 SPATA45Q537H7 98 aa6.15□□□□□ -1.42
RFC1-203ENST00000418436 VAMP8Q9BV40 100 aa6.15□□□□□ -1.42
RFC1-203ENST00000418436 TRAV13-2A0A0B4J235 113 aa6.14□□□□□ -1.43
RFC1-203ENST00000418436 TRBV7-6A0A0J9YX20 115 aa6.14□□□□□ -1.43
RFC1-203ENST00000418436 A6NDN8 102 aa6.14□□□□□ -1.43
RFC1-203ENST00000418436 C6orf99Q4VX62 202 aa6.14□□□□□ -1.43
RFC1-203ENST00000418436 PYY3Q5JQD4 70 aa6.14□□□□□ -1.43
RFC1-203ENST00000418436 C14orf144Q96I85 54 aa6.14□□□□□ -1.43
RFC1-203ENST00000418436 A4D1N5 150 aa6.13□□□□□ -1.43
RFC1-203ENST00000418436 ELOF1P60002 83 aaKnown RBP6.13□□□□□ -1.43
RFC1-203ENST00000418436 C3orf22Q8N5N4 141 aa6.13□□□□□ -1.43
RFC1-203ENST00000418436 HIGD1BQ9P298 99 aa6.13□□□□□ -1.43
RFC1-203ENST00000418436 COX7BP24311 80 aa6.12□□□□□ -1.43
RFC1-203ENST00000418436 GAGE2AQ6NT46 116 aa6.12□□□□□ -1.43
RFC1-203ENST00000418436 HIST1H4GQ99525 98 aa6.12□□□□□ -1.43
RFC1-203ENST00000418436 DHRS4-AS1Q9P1J3 65 aa6.12□□□□□ -1.43
RFC1-203ENST00000418436 SLC25A34Q6PIV7 304 aa6.11□□□□□ -1.43
RFC1-203ENST00000418436 C2orf91Q6ZV80 131 aa6.11□□□□□ -1.43
RFC1-203ENST00000418436 LINC00304Q8N9R0 145 aa6.11□□□□□ -1.43
RFC1-203ENST00000418436 A0A1B0GWB2 263 aa6.1□□□□□ -1.43
RFC1-203ENST00000418436 CTAG1AP78358 180 aa6.1□□□□□ -1.43
RFC1-203ENST00000418436 ST20-AS1Q8NBB2 130 aa6.1□□□□□ -1.43
RFC1-203ENST00000418436 SMIM11BQ8TCY0 68 aa6.1□□□□□ -1.43
RFC1-203ENST00000418436 SPRR1BP22528 89 aa6.09□□□□□ -1.43
RFC1-203ENST00000418436 TSPAN13O95857 204 aa6.08□□□□□ -1.44
RFC1-203ENST00000418436 TAL2Q16559 108 aa6.07□□□□□ -1.44
RFC1-203ENST00000418436 SPAG11AQ6PDA7 123 aa6.07□□□□□ -1.44
RFC1-203ENST00000418436 SSBP3-AS1Q7Z2R9 100 aa6.06□□□□□ -1.44
RFC1-203ENST00000418436 Q8NBF4 154 aa6.06□□□□□ -1.44
RFC1-203ENST00000418436 C12orf57Q99622 126 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms