RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 PPDPFQ9H3Y8 114 aa4.99□□□□□ -1.61
MDC1-203ENST00000417033 APOBP04114 4563 aaKnown RBP4.98□□□□□ -1.61
MDC1-203ENST00000417033 IGLV1-50A0A075B6I6 118 aa4.98□□□□□ -1.61
MDC1-203ENST00000417033 TRBV10-2A0A0K0K1G8 114 aa4.98□□□□□ -1.61
MDC1-203ENST00000417033 IGLV6-57P01721 117 aa4.98□□□□□ -1.61
MDC1-203ENST00000417033 CFC1BP0CG36 223 aa4.98□□□□□ -1.61
MDC1-203ENST00000417033 CFC1P0CG37 223 aa4.98□□□□□ -1.61
MDC1-203ENST00000417033 BVES-AS1Q5T3Y7 98 aa4.98□□□□□ -1.61
MDC1-203ENST00000417033 OR13C6PQ8NH95 151 aa4.98□□□□□ -1.61
MDC1-203ENST00000417033 PSORS1C2Q9UIG4 136 aa4.98□□□□□ -1.61
MDC1-203ENST00000417033 PCP4L1A6NKN8 68 aa4.97□□□□□ -1.61
MDC1-203ENST00000417033 KRTAP10-4P60372 401 aaPredicted RBP4.97□□□□□ -1.61
MDC1-203ENST00000417033 LBHQ53QV2 105 aaPredicted RBP4.97□□□□□ -1.61
MDC1-203ENST00000417033 COPS9Q8WXC6 57 aa4.97□□□□□ -1.61
MDC1-203ENST00000417033 KIAA1109Q2LD37 5005 aa4.97□□□□□ -1.61
MDC1-203ENST00000417033 A6NDN8 102 aa4.96□□□□□ -1.62
MDC1-203ENST00000417033 RPL13AP40429 203 aaKnown RBP4.96□□□□□ -1.62
MDC1-203ENST00000417033 RPL37AP61513 92 aaKnown RBP4.96□□□□□ -1.62
MDC1-203ENST00000417033 S100A7L2Q5SY68 101 aa4.96□□□□□ -1.62
MDC1-203ENST00000417033 NHP2Q9NX24 153 aaKnown RBP4.96□□□□□ -1.62
MDC1-203ENST00000417033 TRAV23DV6A0A075B6W5 121 aa4.95□□□□□ -1.62
MDC1-203ENST00000417033 A0A0B4J2C4 111 aa4.95□□□□□ -1.62
MDC1-203ENST00000417033 H7C2G1 150 aa4.95□□□□□ -1.62
MDC1-203ENST00000417033 BATFQ16520 125 aa4.95□□□□□ -1.62
MDC1-203ENST00000417033 C1orf137Q5JT78 98 aa4.95□□□□□ -1.62
MDC1-203ENST00000417033 Q5VSD8 79 aa4.95□□□□□ -1.62
MDC1-203ENST00000417033 KRTAP4-5Q9BYR2 181 aa4.95□□□□□ -1.62
MDC1-203ENST00000417033 TMEM126AQ9H061 195 aa4.95□□□□□ -1.62
MDC1-203ENST00000417033 TRAV13-2A0A0B4J235 113 aa4.94□□□□□ -1.62
MDC1-203ENST00000417033 A0A1B0GWB2 263 aa4.94□□□□□ -1.62
MDC1-203ENST00000417033 PRYO14603 147 aa4.94□□□□□ -1.62
MDC1-203ENST00000417033 SPRR1AP35321 89 aa4.94□□□□□ -1.62
MDC1-203ENST00000417033 PRLHP81277 87 aa4.94□□□□□ -1.62
MDC1-203ENST00000417033 REG3GQ6UW15 175 aa4.94□□□□□ -1.62
MDC1-203ENST00000417033 SMIM11BQ8TCY0 68 aa4.94□□□□□ -1.62
MDC1-203ENST00000417033 KCNQ1DNQ9H478 68 aa4.94□□□□□ -1.62
MDC1-203ENST00000417033 KRTAP4-16G5E9R7 235 aaPredicted RBP4.93□□□□□ -1.62
MDC1-203ENST00000417033 M0R143 59 aa4.93□□□□□ -1.62
MDC1-203ENST00000417033 BCE1O60756 84 aa4.93□□□□□ -1.62
MDC1-203ENST00000417033 Q8N1X5 172 aa4.93□□□□□ -1.62
MDC1-203ENST00000417033 RAB37Q96AX2 223 aa4.93□□□□□ -1.62
MDC1-203ENST00000417033 HSPG2P98160 4391 aa4.93□□□□□ -1.62
MDC1-203ENST00000417033 ZNF73O43830 326 aaPredicted RBP4.92□□□□□ -1.62
MDC1-203ENST00000417033 IGLV7-43P04211 117 aa4.92□□□□□ -1.62
MDC1-203ENST00000417033 C6orf99Q4VX62 202 aa4.92□□□□□ -1.62
MDC1-203ENST00000417033 FAM19A1Q7Z5A9 133 aa4.92□□□□□ -1.62
MDC1-203ENST00000417033 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
MDC1-203ENST00000417033 NAA38Q9BRA0 125 aaKnown RBP4.92□□□□□ -1.62
MDC1-203ENST00000417033 SNHG12Q9BXW3 62 aa4.92□□□□□ -1.62
MDC1-203ENST00000417033 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
MDC1-203ENST00000417033 TSPAN13O95857 204 aa4.91□□□□□ -1.62
MDC1-203ENST00000417033 DIRC1Q969H9 104 aa4.91□□□□□ -1.62
MDC1-203ENST00000417033 PRO1854Q9UHT4 67 aa4.91□□□□□ -1.62
MDC1-203ENST00000417033 ETDCA0A1B0GVM5 59 aa4.9□□□□□ -1.63
MDC1-203ENST00000417033 UBE2AP49459 152 aa4.9□□□□□ -1.63
MDC1-203ENST00000417033 Q1RN00 199 aa4.9□□□□□ -1.63
MDC1-203ENST00000417033 Q9BRP9 147 aa4.9□□□□□ -1.63
MDC1-203ENST00000417033 TRIAP1O43715 76 aa4.89□□□□□ -1.63
MDC1-203ENST00000417033 ERC2-IT1O76042 136 aa4.89□□□□□ -1.63
MDC1-203ENST00000417033 RPL28P46779 137 aaKnown RBP4.89□□□□□ -1.63
MDC1-203ENST00000417033 Q6ZRX8 168 aa4.89□□□□□ -1.63
MDC1-203ENST00000417033 SMCR5Q8TEV8 140 aa4.89□□□□□ -1.63
MDC1-203ENST00000417033 FAT1Q14517 4588 aa4.89□□□□□ -1.63
MDC1-203ENST00000417033 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
MDC1-203ENST00000417033 ZNF861PO60384 105 aa4.88□□□□□ -1.63
MDC1-203ENST00000417033 COX7BP24311 80 aa4.88□□□□□ -1.63
MDC1-203ENST00000417033 ELOF1P60002 83 aaKnown RBP4.88□□□□□ -1.63
MDC1-203ENST00000417033 HIGD2AQ9BW72 106 aa4.88□□□□□ -1.63
MDC1-203ENST00000417033 KRTAP3-1Q9BYR8 98 aa4.88□□□□□ -1.63
MDC1-203ENST00000417033 TAX1BP3O14907 124 aa4.87□□□□□ -1.63
MDC1-203ENST00000417033 FAM218AQ96MZ4 157 aa4.87□□□□□ -1.63
MDC1-203ENST00000417033 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
MDC1-203ENST00000417033 ST20-AS1Q8NBB2 130 aa4.86□□□□□ -1.63
MDC1-203ENST00000417033 CLEC2BQ92478 149 aa4.86□□□□□ -1.63
MDC1-203ENST00000417033 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
MDC1-203ENST00000417033 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
MDC1-203ENST00000417033 H0Y9J4 135 aa4.85□□□□□ -1.63
MDC1-203ENST00000417033 PSMB2P49721 201 aa4.85□□□□□ -1.63
MDC1-203ENST00000417033 ANAPC11Q9NYG5 84 aa4.85□□□□□ -1.63
MDC1-203ENST00000417033 CBY1Q9Y3M2 126 aa4.85□□□□□ -1.63
MDC1-203ENST00000417033 FLG2Q5D862 2391 aaPredicted RBP4.85□□□□□ -1.63
MDC1-203ENST00000417033 TRBV7-6A0A0J9YX20 115 aa4.84□□□□□ -1.63
MDC1-203ENST00000417033 H3BUT2 72 aa4.84□□□□□ -1.63
MDC1-203ENST00000417033 SPINK6Q6UWN8 80 aa4.84□□□□□ -1.63
MDC1-203ENST00000417033 LINC00575Q6W349 94 aa4.84□□□□□ -1.63
MDC1-203ENST00000417033 KRTAP1-4P0C5Y4 121 aa4.83□□□□□ -1.64
MDC1-203ENST00000417033 INAFM2P0DMQ5 153 aa4.83□□□□□ -1.64
MDC1-203ENST00000417033 UBR4Q5T4S7 5183 aa4.82□□□□□ -1.64
MDC1-203ENST00000417033 VPS13BQ7Z7G8 4022 aa4.82□□□□□ -1.64
MDC1-203ENST00000417033 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
MDC1-203ENST00000417033 VAMP3Q15836 100 aa4.82□□□□□ -1.64
MDC1-203ENST00000417033 COL5A1-AS1Q5SY13 56 aa4.82□□□□□ -1.64
MDC1-203ENST00000417033 SPRR4Q96PI1 79 aa4.82□□□□□ -1.64
MDC1-203ENST00000417033 DHRS4-AS1Q9P1J3 65 aa4.82□□□□□ -1.64
MDC1-203ENST00000417033 HERC1Q15751 4861 aa4.82□□□□□ -1.64
MDC1-203ENST00000417033 LINC01547P58512 204 aaPredicted RBP4.81□□□□□ -1.64
MDC1-203ENST00000417033 GAGE2AQ6NT46 116 aa4.81□□□□□ -1.64
MDC1-203ENST00000417033 A0A087X002 238 aa4.8□□□□□ -1.64
MDC1-203ENST00000417033 hADV29S1A0JD25 119 aa4.8□□□□□ -1.64
MDC1-203ENST00000417033 H0YGX0 51 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms