RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 IGSF10Q6WRI0 2623 aa10.43□□□□□ -0.74
PHRF1-203ENST00000416188 GVQW2A0A096LPI5 108 aaPredicted RBP10.43□□□□□ -0.74
PHRF1-203ENST00000416188 DSPP15924 2871 aaKnown RBP10.42□□□□□ -0.74
PHRF1-203ENST00000416188 LOC110117498A0A087WWA1 95 aa10.41□□□□□ -0.74
PHRF1-203ENST00000416188 C4orf26Q17RF5 130 aa10.41□□□□□ -0.74
PHRF1-203ENST00000416188 COL6A5A8TX70 2615 aa10.41□□□□□ -0.74
PHRF1-203ENST00000416188 TP53AIP1Q9HCN2 124 aa10.41□□□□□ -0.74
PHRF1-203ENST00000416188 A0A1B0GW54 56 aa10.41□□□□□ -0.74
PHRF1-203ENST00000416188 APLNQ9ULZ1 77 aa10.4□□□□□ -0.74
PHRF1-203ENST00000416188 VPREB1P12018 145 aa10.39□□□□□ -0.75
PHRF1-203ENST00000416188 TYMSOSQ8TAI1 123 aa10.39□□□□□ -0.75
PHRF1-203ENST00000416188 C7orf65Q6ZTY9 151 aa10.39□□□□□ -0.75
PHRF1-203ENST00000416188 FAM168BA1KXE4 195 aa10.38□□□□□ -0.75
PHRF1-203ENST00000416188 A0A087WTM6 91 aa10.38□□□□□ -0.75
PHRF1-203ENST00000416188 AKAP13Q12802 2813 aa10.37□□□□□ -0.75
PHRF1-203ENST00000416188 BCE1O60756 84 aa10.37□□□□□ -0.75
PHRF1-203ENST00000416188 CHD6Q8TD26 2715 aa10.37□□□□□ -0.75
PHRF1-203ENST00000416188 EIF4EBP3O60516 100 aaPredicted RBP10.37□□□□□ -0.75
PHRF1-203ENST00000416188 SMR3BP02814 79 aaPredicted RBP10.36□□□□□ -0.75
PHRF1-203ENST00000416188 TEX15Q9BXT5 2789 aa10.36□□□□□ -0.75
PHRF1-203ENST00000416188 IGLV6-57P01721 117 aa10.36□□□□□ -0.75
PHRF1-203ENST00000416188 RPS28P62857 69 aaKnown RBP10.35□□□□□ -0.75
PHRF1-203ENST00000416188 PRO0628Q9UI54 55 aa10.35□□□□□ -0.75
PHRF1-203ENST00000416188 SERTAD4-AS1Q5TG53 156 aa10.34□□□□□ -0.75
PHRF1-203ENST00000416188 TRAV22A0A0B4J277 110 aa10.32□□□□□ -0.76
PHRF1-203ENST00000416188 WDFY4Q6ZS81 3184 aa10.32□□□□□ -0.76
PHRF1-203ENST00000416188 A0A1B0GU69 56 aa10.32□□□□□ -0.76
PHRF1-203ENST00000416188 LINC00612Q8N6U2 182 aa10.32□□□□□ -0.76
PHRF1-203ENST00000416188 ACYP2P14621 99 aa10.32□□□□□ -0.76
PHRF1-203ENST00000416188 CASC10Q5T4H9 136 aa10.31□□□□□ -0.76
PHRF1-203ENST00000416188 LINC00313P59037 77 aa10.31□□□□□ -0.76
PHRF1-203ENST00000416188 SPAG11AQ6PDA7 123 aa10.3□□□□□ -0.76
PHRF1-203ENST00000416188 TRBV7-4A0A0J9YYF1 115 aa10.29□□□□□ -0.76
PHRF1-203ENST00000416188 GCN1Q92616 2671 aaKnown RBP10.28□□□□□ -0.76
PHRF1-203ENST00000416188 IGLV1-50A0A075B6I6 118 aa10.27□□□□□ -0.77
PHRF1-203ENST00000416188 CR1P17927 2039 aa10.26□□□□□ -0.77
PHRF1-203ENST00000416188 H3BPC8 53 aa10.26□□□□□ -0.77
PHRF1-203ENST00000416188 KCNQ1DNQ9H478 68 aa10.26□□□□□ -0.77
PHRF1-203ENST00000416188 PRR34Q9NV39 138 aa10.26□□□□□ -0.77
PHRF1-203ENST00000416188 LINC00528Q8N1L1 170 aa10.25□□□□□ -0.77
PHRF1-203ENST00000416188 K7EQZ3 153 aa10.25□□□□□ -0.77
PHRF1-203ENST00000416188 WIPF1O43516 503 aa10.23□□□□□ -0.77
PHRF1-203ENST00000416188 C15orf56Q8N910 161 aa10.23□□□□□ -0.77
PHRF1-203ENST00000416188 C9orf163Q8N9P6 203 aa10.22□□□□□ -0.77
PHRF1-203ENST00000416188 Q96NJ1 140 aa10.22□□□□□ -0.77
PHRF1-203ENST00000416188 A8MWP4 228 aa10.21□□□□□ -0.77
PHRF1-203ENST00000416188 TRIOO75962 3097 aa10.2□□□□□ -0.78
PHRF1-203ENST00000416188 ZNF575Q86XF7 245 aa10.2□□□□□ -0.78
PHRF1-203ENST00000416188 CFAP54Q96N23 3096 aa10.2□□□□□ -0.78
PHRF1-203ENST00000416188 IGLV8-61A0A075B6I0 122 aa10.19□□□□□ -0.78
PHRF1-203ENST00000416188 TNP2Q05952 138 aa10.18□□□□□ -0.78
PHRF1-203ENST00000416188 IGFL1Q6UW32 110 aa10.18□□□□□ -0.78
PHRF1-203ENST00000416188 C9orf129Q5T035 196 aaKnown RBP10.17□□□□□ -0.78
PHRF1-203ENST00000416188 MRPL34Q9BQ48 92 aaKnown RBP10.16□□□□□ -0.78
PHRF1-203ENST00000416188 A0A0G2JQZ4 141 aa10.16□□□□□ -0.78
PHRF1-203ENST00000416188 A0A1W2PNN7 141 aa10.16□□□□□ -0.78
PHRF1-203ENST00000416188 UNC80Q8N2C7 3258 aa10.16□□□□□ -0.78
PHRF1-203ENST00000416188 LOC101927531A0A1B0GV80 90 aa10.15□□□□□ -0.78
PHRF1-203ENST00000416188 Q8N377 158 aa10.15□□□□□ -0.78
PHRF1-203ENST00000416188 ATP11AUNQ6ZP68 121 aa10.15□□□□□ -0.79
PHRF1-203ENST00000416188 C8orf87E5RJ46 101 aa10.13□□□□□ -0.79
PHRF1-203ENST00000416188 LAMA2P24043 3122 aaKnown RBP10.12□□□□□ -0.79
PHRF1-203ENST00000416188 ZNF861PO60384 105 aa10.12□□□□□ -0.79
PHRF1-203ENST00000416188 XIRP2A4UGR9 3374 aa10.12□□□□□ -0.79
PHRF1-203ENST00000416188 NOTCH1P46531 2555 aa10.12□□□□□ -0.79
PHRF1-203ENST00000416188 LINC00304Q8N9R0 145 aa10.1□□□□□ -0.79
PHRF1-203ENST00000416188 PRR15Q8IV56 129 aa10.09□□□□□ -0.79
PHRF1-203ENST00000416188 DSCR10P59022 87 aa10.08□□□□□ -0.8
PHRF1-203ENST00000416188 ANAPC11Q9NYG5 84 aa10.08□□□□□ -0.8
PHRF1-203ENST00000416188 C8orf17Q9NRJ1 99 aa10.07□□□□□ -0.8
PHRF1-203ENST00000416188 ERC2-IT1O76042 136 aa10.07□□□□□ -0.8
PHRF1-203ENST00000416188 CNBPP62633 177 aaKnown RBP10.07□□□□□ -0.8
PHRF1-203ENST00000416188 CDH23Q9H251 3354 aa10.06□□□□□ -0.8
PHRF1-203ENST00000416188 TLX1NBP0CAT3 122 aa10.06□□□□□ -0.8
PHRF1-203ENST00000416188 COA5Q86WW8 74 aa10.06□□□□□ -0.8
PHRF1-203ENST00000416188 NBEAL1Q6ZS30 2694 aa10.05□□□□□ -0.8
PHRF1-203ENST00000416188 IGLV7-43P04211 117 aa10.05□□□□□ -0.8
PHRF1-203ENST00000416188 SSBP3-AS1Q7Z2R9 100 aa10.05□□□□□ -0.8
PHRF1-203ENST00000416188 A8MUN3 132 aa10.04□□□□□ -0.8
PHRF1-203ENST00000416188 PSORS1C2Q9UIG4 136 aa10.04□□□□□ -0.8
PHRF1-203ENST00000416188 MAP1AP78559 2803 aaPredicted RBP10.04□□□□□ -0.8
PHRF1-203ENST00000416188 COX6B2Q6YFQ2 88 aa10.03□□□□□ -0.8
PHRF1-203ENST00000416188 LINC01600Q96MT4 127 aa10.03□□□□□ -0.8
PHRF1-203ENST00000416188 KLKP1Q107X0 134 aa10.03□□□□□ -0.8
PHRF1-203ENST00000416188 PLA2G2DQ9UNK4 145 aa10.02□□□□□ -0.81
PHRF1-203ENST00000416188 A0A1B0GVX0 72 aa10.02□□□□□ -0.81
PHRF1-203ENST00000416188 OBSCN-AS1Q96MR7 158 aa10.02□□□□□ -0.81
PHRF1-203ENST00000416188 H7BZZ5 65 aa10□□□□□ -0.81
PHRF1-203ENST00000416188 UBR5O95071 2799 aaPredicted RBP9.99□□□□□ -0.81
PHRF1-203ENST00000416188 LCE6AA0A183 80 aa9.99□□□□□ -0.81
PHRF1-203ENST00000416188 C9orf92A6NGG3 77 aa9.98□□□□□ -0.81
PHRF1-203ENST00000416188 A0A1W2PNM2 257 aa9.97□□□□□ -0.81
PHRF1-203ENST00000416188 SZT2Q5T011 3432 aa9.97□□□□□ -0.81
PHRF1-203ENST00000416188 FLNCQ14315 2725 aa9.96□□□□□ -0.81
PHRF1-203ENST00000416188 SPRR4Q96PI1 79 aa9.93□□□□□ -0.82
PHRF1-203ENST00000416188 UQCR11O14957 56 aa9.92□□□□□ -0.82
PHRF1-203ENST00000416188 TNRC18O15417 2968 aaPredicted RBP9.9□□□□□ -0.82
PHRF1-203ENST00000416188 CYP4F30PQ9H0H9 118 aa9.9□□□□□ -0.82
PHRF1-203ENST00000416188 VPS13AQ96RL7 3174 aa9.89□□□□□ -0.83
PHRF1-203ENST00000416188 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms