RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 PACRGQ96M98 296 aaPredicted RBP2.66□□□□□ -1.98
CSTF1-202ENST00000415828 TP73-AS1Q9UF72 201 aa2.66□□□□□ -1.98
CSTF1-202ENST00000415828 DSTQ03001 7570 aaKnown RBP2.65□□□□□ -1.98
CSTF1-202ENST00000415828 A0A087WX48 190 aa2.65□□□□□ -1.99
CSTF1-202ENST00000415828 TRAV8-6A0A0B4J262 113 aa2.65□□□□□ -1.99
CSTF1-202ENST00000415828 XCL1P47992 114 aa2.65□□□□□ -1.99
CSTF1-202ENST00000415828 COX6A2Q02221 97 aa2.65□□□□□ -1.99
CSTF1-202ENST00000415828 UBE2WQ96B02 151 aa2.65□□□□□ -1.99
CSTF1-202ENST00000415828 CST9LQ9H4G1 147 aa2.65□□□□□ -1.99
CSTF1-202ENST00000415828 HSPB8Q9UJY1 196 aa2.65□□□□□ -1.99
CSTF1-202ENST00000415828 IGLV4-69A0A075B6H9 119 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 IGKV2-24A0A0C4DH68 120 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 C11orf86A6NJI1 115 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.64□□□□□ -1.99
CSTF1-202ENST00000415828 SYS1-DBNDD2H3BUS1 97 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 CCL25O15444 150 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 SPINK8P0C7L1 97 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 UBE2D1P51668 147 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 ENHOQ6UWT2 76 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 C5orf38Q86SI9 138 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 LINC00526Q96FQ7 95 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 TMEM141Q96I45 108 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 MAP1LC3CQ9BXW4 147 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 CDC42SE2Q9NRR3 84 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 SPANXA1Q9NS26 97 aa2.64□□□□□ -1.99
CSTF1-202ENST00000415828 MRPL35Q9NZE8 188 aaKnown RBP2.64□□□□□ -1.99
CSTF1-202ENST00000415828 CHTOPQ9Y3Y2 248 aaKnown RBP2.64□□□□□ -1.99
CSTF1-202ENST00000415828 LINC00959A0A1B0GUT2 108 aa2.63□□□□□ -1.99
CSTF1-202ENST00000415828 MT2AP02795 61 aa2.63□□□□□ -1.99
CSTF1-202ENST00000415828 MT1FP04733 61 aa2.63□□□□□ -1.99
CSTF1-202ENST00000415828 TLX1NBP0CAT3 122 aa2.63□□□□□ -1.99
CSTF1-202ENST00000415828 PMVKQ15126 192 aa2.63□□□□□ -1.99
CSTF1-202ENST00000415828 TMEM97Q5BJF2 176 aa2.63□□□□□ -1.99
CSTF1-202ENST00000415828 PYY3Q5JQD4 70 aa2.63□□□□□ -1.99
CSTF1-202ENST00000415828 TMEM170BQ5T4T1 132 aa2.63□□□□□ -1.99
CSTF1-202ENST00000415828 MRPL52Q86TS9 123 aaKnown RBP2.63□□□□□ -1.99
CSTF1-202ENST00000415828 LINC00469Q8N7U9 141 aa2.63□□□□□ -1.99
CSTF1-202ENST00000415828 AMELXQ99217 191 aa2.63□□□□□ -1.99
CSTF1-202ENST00000415828 TIMM17AQ99595 171 aa2.63□□□□□ -1.99
CSTF1-202ENST00000415828 TTTY13Q9BZ97 58 aa2.63□□□□□ -1.99
CSTF1-202ENST00000415828 CRPP02741 224 aa2.62□□□□□ -1.99
CSTF1-202ENST00000415828 ZNF22P17026 224 aaPredicted RBP2.62□□□□□ -1.99
CSTF1-202ENST00000415828 TSPEAR-AS2P59090 65 aa2.62□□□□□ -1.99
CSTF1-202ENST00000415828 MRPS36P82909 103 aaKnown RBP2.62□□□□□ -1.99
CSTF1-202ENST00000415828 LINC01545Q5VT33 79 aa2.62□□□□□ -1.99
CSTF1-202ENST00000415828 LINC00337Q8N6G1 96 aa2.62□□□□□ -1.99
CSTF1-202ENST00000415828 C2orf88Q9BSF0 95 aa2.62□□□□□ -1.99
CSTF1-202ENST00000415828 TIMM21Q9BVV7 248 aa2.62□□□□□ -1.99
CSTF1-202ENST00000415828 PRO1933Q9H354 126 aa2.62□□□□□ -1.99
CSTF1-202ENST00000415828 CDKN2A-AS1Q9UH64 79 aa2.62□□□□□ -1.99
CSTF1-202ENST00000415828 IGKV2D-26A0A0A0MRZ7 120 aa2.61□□□□□ -1.99
CSTF1-202ENST00000415828 F8VRH5 84 aa2.61□□□□□ -1.99
CSTF1-202ENST00000415828 K7EMI3 77 aa2.61□□□□□ -1.99
CSTF1-202ENST00000415828 DPM2O94777 84 aa2.61□□□□□ -1.99
CSTF1-202ENST00000415828 IGKCP01834 107 aa2.61□□□□□ -1.99
CSTF1-202ENST00000415828 IGLC3P0DOY3 106 aa2.61□□□□□ -1.99
CSTF1-202ENST00000415828 ZNF25P17030 456 aaPredicted RBP2.61□□□□□ -1.99
CSTF1-202ENST00000415828 JOSD1Q15040 202 aaPredicted RBP2.61□□□□□ -1.99
CSTF1-202ENST00000415828 DEFB116Q30KQ4 102 aa2.61□□□□□ -1.99
CSTF1-202ENST00000415828 KRTAP26-1Q6PEX3 210 aa2.61□□□□□ -1.99
CSTF1-202ENST00000415828 PP632Q6XCG6 107 aa2.61□□□□□ -1.99
CSTF1-202ENST00000415828 RMI2Q96E14 147 aa2.61□□□□□ -1.99
CSTF1-202ENST00000415828 TOMM7Q9P0U1 55 aa2.61□□□□□ -1.99
CSTF1-202ENST00000415828 TRAV12-1A0A0B4J245 112 aa2.6□□□□□ -1.99
CSTF1-202ENST00000415828 TMEM223A0PJW6 202 aa2.6□□□□□ -1.99
CSTF1-202ENST00000415828 C20orf202A1L168 122 aa2.6□□□□□ -1.99
CSTF1-202ENST00000415828 G0S2P27469 103 aa2.6□□□□□ -1.99
CSTF1-202ENST00000415828 SPATA45Q537H7 98 aa2.6□□□□□ -1.99
CSTF1-202ENST00000415828 C1orf137Q5JT78 98 aa2.6□□□□□ -1.99
CSTF1-202ENST00000415828 C2orf82Q6UX34 121 aa2.6□□□□□ -1.99
CSTF1-202ENST00000415828 ORAOV1Q8WV07 137 aa2.6□□□□□ -1.99
CSTF1-202ENST00000415828 DIRC1Q969H9 104 aa2.6□□□□□ -1.99
CSTF1-202ENST00000415828 ZNF625Q96I27 306 aaPredicted RBP2.6□□□□□ -1.99
CSTF1-202ENST00000415828 C14orf144Q96I85 54 aa2.6□□□□□ -1.99
CSTF1-202ENST00000415828 IGKV2-28A0A075B6P5 120 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 A0A096LNI7 61 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 TINCRA0A1B0GVN0 87 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 A0A1B0GVX0 72 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 COX7A2LO14548 114 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 IGKV2D-28P01615 120 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 SPRR2EP22531 72 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 SPRR2BP35325 72 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 SPRR2AP35326 72 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 PKIAP61925 76 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 SPAG11BQ08648 103 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 SMAGPQ0VAQ4 97 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 C9orf116Q5BN46 136 aaPredicted RBP2.59□□□□□ -1.99
CSTF1-202ENST00000415828 COX6B2Q6YFQ2 88 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 C15orf56Q8N910 161 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 PLEKHB2Q96CS7 222 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 C12orf57Q99622 126 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 VAMP8Q9BV40 100 aa2.59□□□□□ -1.99
CSTF1-202ENST00000415828 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
CSTF1-202ENST00000415828 SMIM26A0A096LP01 95 aa2.58□□□□□ -2
CSTF1-202ENST00000415828 IGHV3OR16-9A0A0B4J2B5 98 aa2.58□□□□□ -2
CSTF1-202ENST00000415828 A6NDN8 102 aa2.58□□□□□ -2
CSTF1-202ENST00000415828 PLNP26678 52 aa2.58□□□□□ -2
CSTF1-202ENST00000415828 NPC2P61916 151 aa2.58□□□□□ -2
CSTF1-202ENST00000415828 HERVK_113P63121 156 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms