RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 KRTAP7-1Q8IUC3 87 aa6.45□□□□□ -1.38
SS18-203ENST00000415083 H7BZZ5 65 aa6.44□□□□□ -1.38
SS18-203ENST00000415083 SERTAD4-AS1Q5TG53 156 aa6.44□□□□□ -1.38
SS18-203ENST00000415083 TM2D3Q9BRN9 247 aa6.44□□□□□ -1.38
SS18-203ENST00000415083 MAST4O15021 2626 aa6.44□□□□□ -1.38
SS18-203ENST00000415083 COX7BP24311 80 aa6.44□□□□□ -1.38
SS18-203ENST00000415083 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.44□□□□□ -1.38
SS18-203ENST00000415083 CAMK2N2Q96S95 79 aa6.43□□□□□ -1.38
SS18-203ENST00000415083 F8P00451 2351 aa6.43□□□□□ -1.38
SS18-203ENST00000415083 DYNC2H1Q8NCM8 4307 aaKnown RBP6.43□□□□□ -1.38
SS18-203ENST00000415083 TRAV7A0A075B6U4 112 aa6.43□□□□□ -1.38
SS18-203ENST00000415083 CASC10Q5T4H9 136 aa6.43□□□□□ -1.38
SS18-203ENST00000415083 F8WEM9 126 aa6.42□□□□□ -1.38
SS18-203ENST00000415083 EGFEM1PQ0D2K5 195 aa6.42□□□□□ -1.38
SS18-203ENST00000415083 NDUFC2-KCTD14E9PQ53 114 aa6.42□□□□□ -1.38
SS18-203ENST00000415083 H3BNG1 76 aa6.41□□□□□ -1.38
SS18-203ENST00000415083 M0R378 163 aa6.41□□□□□ -1.38
SS18-203ENST00000415083 SRRM2Q9UQ35 2752 aaKnown RBP6.4□□□□□ -1.38
SS18-203ENST00000415083 FAM168BA1KXE4 195 aa6.4□□□□□ -1.39
SS18-203ENST00000415083 CXCL6P80162 114 aa6.4□□□□□ -1.39
SS18-203ENST00000415083 DEFB105AQ8NG35 78 aa6.4□□□□□ -1.39
SS18-203ENST00000415083 BAHCC1Q9P281 2608 aa6.4□□□□□ -1.39
SS18-203ENST00000415083 NBEAL1Q6ZS30 2694 aa6.39□□□□□ -1.39
SS18-203ENST00000415083 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
SS18-203ENST00000415083 NOTCH1P46531 2555 aa6.39□□□□□ -1.39
SS18-203ENST00000415083 Q8N377 158 aa6.39□□□□□ -1.39
SS18-203ENST00000415083 EPM2AB3EWF7 344 aa6.38□□□□□ -1.39
SS18-203ENST00000415083 C3orf84H3BNL1 204 aa6.38□□□□□ -1.39
SS18-203ENST00000415083 Q9BRP9 147 aa6.38□□□□□ -1.39
SS18-203ENST00000415083 LINC00474Q9P2X8 69 aa6.38□□□□□ -1.39
SS18-203ENST00000415083 BPY2O14599 106 aa6.38□□□□□ -1.39
SS18-203ENST00000415083 C7orf33Q8WU49 177 aa6.38□□□□□ -1.39
SS18-203ENST00000415083 LINC01556Q5JQF7 62 aa6.37□□□□□ -1.39
SS18-203ENST00000415083 KCNQ1DNQ9H478 68 aa6.37□□□□□ -1.39
SS18-203ENST00000415083 PLECQ15149 4684 aaKnown RBP6.37□□□□□ -1.39
SS18-203ENST00000415083 IGKV4-1P06312 121 aa6.37□□□□□ -1.39
SS18-203ENST00000415083 KLKP1Q107X0 134 aa6.36□□□□□ -1.39
SS18-203ENST00000415083 LINC00336Q6ZUF6 198 aa6.36□□□□□ -1.39
SS18-203ENST00000415083 SERP1Q9Y6X1 66 aa6.36□□□□□ -1.39
SS18-203ENST00000415083 NREPQ16612 68 aa6.35□□□□□ -1.39
SS18-203ENST00000415083 IGKV2D-24A0A075B6R9 120 aa6.35□□□□□ -1.39
SS18-203ENST00000415083 PDE6GP18545 87 aa6.35□□□□□ -1.39
SS18-203ENST00000415083 BCE1O60756 84 aa6.34□□□□□ -1.39
SS18-203ENST00000415083 SYCNQ0VAF6 134 aa6.34□□□□□ -1.39
SS18-203ENST00000415083 FP248Q71RG6 208 aaPredicted RBP6.34□□□□□ -1.39
SS18-203ENST00000415083 ST20-AS1Q8NBB2 130 aa6.34□□□□□ -1.39
SS18-203ENST00000415083 RPL37AP8A6NKH3 93 aa6.34□□□□□ -1.4
SS18-203ENST00000415083 TNP2Q05952 138 aa6.34□□□□□ -1.4
SS18-203ENST00000415083 C1orf43Q9BWL3 253 aa6.34□□□□□ -1.4
SS18-203ENST00000415083 DEFB131BA0A096LNP1 70 aa6.33□□□□□ -1.4
SS18-203ENST00000415083 ERC2-IT1O76042 136 aa6.33□□□□□ -1.4
SS18-203ENST00000415083 DNAH10OSP0CZ25 163 aa6.33□□□□□ -1.4
SS18-203ENST00000415083 IGLV5-48A0A075B6I7 105 aa6.33□□□□□ -1.4
SS18-203ENST00000415083 A0A1W2PNM2 257 aa6.33□□□□□ -1.4
SS18-203ENST00000415083 H3BQ85 93 aa6.33□□□□□ -1.4
SS18-203ENST00000415083 TMEM254Q8TBM7 123 aa6.33□□□□□ -1.4
SS18-203ENST00000415083 LINC00588Q9Y4M8 146 aa6.32□□□□□ -1.4
SS18-203ENST00000415083 SPRR1AP35321 89 aa6.32□□□□□ -1.4
SS18-203ENST00000415083 KRTAP24-1Q3LI83 254 aa6.32□□□□□ -1.4
SS18-203ENST00000415083 MPLKIPQ8TAP9 179 aa6.32□□□□□ -1.4
SS18-203ENST00000415083 IGLV1-50A0A075B6I6 118 aa6.31□□□□□ -1.4
SS18-203ENST00000415083 TLX1NBP0CAT3 122 aa6.31□□□□□ -1.4
SS18-203ENST00000415083 HECTD4Q9Y4D8 3996 aa6.31□□□□□ -1.4
SS18-203ENST00000415083 TENM2Q9NT68 2774 aa6.31□□□□□ -1.4
SS18-203ENST00000415083 FAM229BQ4G0N7 80 aa6.31□□□□□ -1.4
SS18-203ENST00000415083 OCR1Q9BZK8 76 aa6.31□□□□□ -1.4
SS18-203ENST00000415083 FRAS1Q86XX4 4008 aa6.3□□□□□ -1.4
SS18-203ENST00000415083 A0A0G2JQZ4 141 aa6.3□□□□□ -1.4
SS18-203ENST00000415083 A0A1W2PNN7 141 aa6.3□□□□□ -1.4
SS18-203ENST00000415083 Q6ZRX8 168 aa6.3□□□□□ -1.4
SS18-203ENST00000415083 C11orf45Q8TAV5 145 aa6.3□□□□□ -1.4
SS18-203ENST00000415083 HIGD2AQ9BW72 106 aa6.3□□□□□ -1.4
SS18-203ENST00000415083 COL6A5A8TX70 2615 aa6.3□□□□□ -1.4
SS18-203ENST00000415083 PRB2P02812 416 aaPredicted RBP6.29□□□□□ -1.4
SS18-203ENST00000415083 PLA2G2DQ9UNK4 145 aa6.29□□□□□ -1.4
SS18-203ENST00000415083 IGLV5-37A0A075B6J1 123 aa6.29□□□□□ -1.4
SS18-203ENST00000415083 FAM30AQ9NZY2 134 aa6.29□□□□□ -1.4
SS18-203ENST00000415083 SMIM26A0A096LP01 95 aa6.28□□□□□ -1.4
SS18-203ENST00000415083 LRCOL1A6NCL2 159 aa6.28□□□□□ -1.4
SS18-203ENST00000415083 SMIM29Q86T20 159 aa6.28□□□□□ -1.4
SS18-203ENST00000415083 F8WDY8 70 aa6.27□□□□□ -1.41
SS18-203ENST00000415083 KRTAP1-5Q9BYS1 174 aa6.27□□□□□ -1.41
SS18-203ENST00000415083 PKIGQ9Y2B9 76 aa6.27□□□□□ -1.41
SS18-203ENST00000415083 STARD9Q9P2P6 4700 aa6.27□□□□□ -1.41
SS18-203ENST00000415083 NKAPP1Q8N9T2 125 aa6.27□□□□□ -1.41
SS18-203ENST00000415083 A0A0U1RQV1 116 aa6.25□□□□□ -1.41
SS18-203ENST00000415083 KRTAP11-1Q8IUC1 163 aa6.25□□□□□ -1.41
SS18-203ENST00000415083 DSCR10P59022 87 aa6.25□□□□□ -1.41
SS18-203ENST00000415083 BRK1Q8WUW1 75 aa6.25□□□□□ -1.41
SS18-203ENST00000415083 PRKDCP78527 4128 aaKnown RBP6.25□□□□□ -1.41
SS18-203ENST00000415083 PRYO14603 147 aa6.25□□□□□ -1.41
SS18-203ENST00000415083 MRAPQ8TCY5 172 aa6.25□□□□□ -1.41
SS18-203ENST00000415083 DNAH2Q9P225 4427 aa6.25□□□□□ -1.41
SS18-203ENST00000415083 NDUFC1O43677 76 aa6.24□□□□□ -1.41
SS18-203ENST00000415083 FUSP35637 526 aaKnown RBP eCLIP6.24□□□□□ -1.41
SS18-203ENST00000415083 SPRR4Q96PI1 79 aa6.24□□□□□ -1.41
SS18-203ENST00000415083 DNAH8Q96JB1 4490 aa6.23□□□□□ -1.41
SS18-203ENST00000415083 PRR4Q16378 134 aa6.23□□□□□ -1.41
SS18-203ENST00000415083 PRO0628Q9UI54 55 aa6.23□□□□□ -1.41
SS18-203ENST00000415083 STAB2Q8WWQ8 2551 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms