RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 IMUPQ9GZP8 106 aa15.77■□□□□ 0.12
VRK2-202ENST00000412104 IGLV1-50A0A075B6I6 118 aa15.76■□□□□ 0.11
VRK2-202ENST00000412104 NDUFV3P56181 108 aaKnown RBP15.76■□□□□ 0.11
VRK2-202ENST00000412104 LOC110117498A0A087WWA1 95 aa15.75■□□□□ 0.11
VRK2-202ENST00000412104 PRYO14603 147 aa15.75■□□□□ 0.11
VRK2-202ENST00000412104 Q6ZQT0 140 aa15.75■□□□□ 0.11
VRK2-202ENST00000412104 ANAPC13Q9BS18 74 aa15.74■□□□□ 0.11
VRK2-202ENST00000412104 MRPL55Q7Z7F7 128 aaKnown RBP15.73■□□□□ 0.11
VRK2-202ENST00000412104 DNAH10Q8IVF4 4471 aa15.73■□□□□ 0.11
VRK2-202ENST00000412104 NBDYA0A0U1RRE5 68 aa15.72■□□□□ 0.11
VRK2-202ENST00000412104 DSCR8Q96T75 97 aa15.71■□□□□ 0.11
VRK2-202ENST00000412104 DNAH7Q8WXX0 4024 aa15.7■□□□□ 0.1
VRK2-202ENST00000412104 KRTAP4-16G5E9R7 235 aaPredicted RBP15.7■□□□□ 0.1
VRK2-202ENST00000412104 SPRR1AP35321 89 aa15.7■□□□□ 0.1
VRK2-202ENST00000412104 C14orf177Q52M58 125 aa15.7■□□□□ 0.1
VRK2-202ENST00000412104 A0A096LNI7 61 aa15.7■□□□□ 0.1
VRK2-202ENST00000412104 Q6JHZ5 121 aa15.7■□□□□ 0.1
VRK2-202ENST00000412104 Q6ZRX8 168 aa15.69■□□□□ 0.1
VRK2-202ENST00000412104 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.68■□□□□ 0.1
VRK2-202ENST00000412104 C16orf90A8MZG2 172 aa15.68■□□□□ 0.1
VRK2-202ENST00000412104 B5MCH6 92 aa15.68■□□□□ 0.1
VRK2-202ENST00000412104 PLECQ15149 4684 aaKnown RBP15.66■□□□□ 0.1
VRK2-202ENST00000412104 IGKV2-24A0A0C4DH68 120 aa15.66■□□□□ 0.1
VRK2-202ENST00000412104 ETDCA0A1B0GVM5 59 aa15.66■□□□□ 0.1
VRK2-202ENST00000412104 PDE6GP18545 87 aa15.66■□□□□ 0.1
VRK2-202ENST00000412104 DHRS4-AS1Q9P1J3 65 aa15.65■□□□□ 0.1
VRK2-202ENST00000412104 PRKDCP78527 4128 aaKnown RBP15.65■□□□□ 0.1
VRK2-202ENST00000412104 IGKV3D-7A0A0C4DH55 119 aa15.64■□□□□ 0.09
VRK2-202ENST00000412104 TRBV7-4A0A0J9YYF1 115 aa15.64■□□□□ 0.09
VRK2-202ENST00000412104 Q9BRP9 147 aa15.64■□□□□ 0.09
VRK2-202ENST00000412104 M0R2N4 97 aa15.64■□□□□ 0.09
VRK2-202ENST00000412104 FAM236AA0A1B0GUQ0 79 aa15.63■□□□□ 0.09
VRK2-202ENST00000412104 FAM236BA0A1B0GV22 79 aa15.63■□□□□ 0.09
VRK2-202ENST00000412104 LRCOL1A6NCL2 159 aa15.63■□□□□ 0.09
VRK2-202ENST00000412104 TENM2Q9NT68 2774 aa15.63■□□□□ 0.09
VRK2-202ENST00000412104 Q6ZRN7 208 aaPredicted RBP15.61■□□□□ 0.09
VRK2-202ENST00000412104 UBL5Q9BZL1 73 aa15.6■□□□□ 0.09
VRK2-202ENST00000412104 A0A1W2PNN7 141 aa15.59■□□□□ 0.09
VRK2-202ENST00000412104 REG3GQ6UW15 175 aa15.58■□□□□ 0.09
VRK2-202ENST00000412104 DEFB105AQ8NG35 78 aa15.58■□□□□ 0.09
VRK2-202ENST00000412104 Q8N377 158 aa15.58■□□□□ 0.08
VRK2-202ENST00000412104 LINC01547P58512 204 aaPredicted RBP15.57■□□□□ 0.08
VRK2-202ENST00000412104 MEGF8Q7Z7M0 2845 aa15.57■□□□□ 0.08
VRK2-202ENST00000412104 STARD9Q9P2P6 4700 aa15.57■□□□□ 0.08
VRK2-202ENST00000412104 ATP5EP2Q5VTU8 51 aa15.56■□□□□ 0.08
VRK2-202ENST00000412104 C9orf163Q8N9P6 203 aa15.55■□□□□ 0.08
VRK2-202ENST00000412104 CHTF8P0CG12 524 aa15.54■□□□□ 0.08
VRK2-202ENST00000412104 UBE2BP63146 152 aa15.52■□□□□ 0.07
VRK2-202ENST00000412104 ST20-AS1Q8NBB2 130 aa15.51■□□□□ 0.07
VRK2-202ENST00000412104 ERC2-IT1O76042 136 aa15.51■□□□□ 0.07
VRK2-202ENST00000412104 DNHD1Q96M86 4753 aa15.5■□□□□ 0.07
VRK2-202ENST00000412104 IGLV5-48A0A075B6I7 105 aa15.49■□□□□ 0.07
VRK2-202ENST00000412104 HIST1H4AP62805 103 aaKnown RBP15.49■□□□□ 0.07
VRK2-202ENST00000412104 Q6ZVQ6 151 aa15.49■□□□□ 0.07
VRK2-202ENST00000412104 PKIGQ9Y2B9 76 aa15.49■□□□□ 0.07
VRK2-202ENST00000412104 A0A087WVE0 104 aa15.48■□□□□ 0.07
VRK2-202ENST00000412104 C3orf22Q8N5N4 141 aa15.47■□□□□ 0.07
VRK2-202ENST00000412104 VPS13DQ5THJ4 4388 aa15.46■□□□□ 0.07
VRK2-202ENST00000412104 CCDC179H3BU77 68 aa15.45■□□□□ 0.06
VRK2-202ENST00000412104 PHF5AQ7RTV0 110 aaKnown RBP15.45■□□□□ 0.06
VRK2-202ENST00000412104 FAM19A1Q7Z5A9 133 aa15.44■□□□□ 0.06
VRK2-202ENST00000412104 PRLHP81277 87 aa15.42■□□□□ 0.06
VRK2-202ENST00000412104 TNP2Q05952 138 aa15.41■□□□□ 0.06
VRK2-202ENST00000412104 KRTAP11-1Q8IUC1 163 aa15.41■□□□□ 0.06
VRK2-202ENST00000412104 LINC00474Q9P2X8 69 aa15.41■□□□□ 0.06
VRK2-202ENST00000412104 HAMPP81172 84 aa15.4■□□□□ 0.06
VRK2-202ENST00000412104 A0A087WTM6 91 aa15.39■□□□□ 0.05
VRK2-202ENST00000412104 Q6ZR54 194 aa15.39■□□□□ 0.05
VRK2-202ENST00000412104 PANO1I0J062 215 aa15.38■□□□□ 0.05
VRK2-202ENST00000412104 ATOX1O00244 68 aa15.38■□□□□ 0.05
VRK2-202ENST00000412104 CXCL6P80162 114 aa15.35■□□□□ 0.05
VRK2-202ENST00000412104 C1orf137Q5JT78 98 aa15.33■□□□□ 0.05
VRK2-202ENST00000412104 HIGD2AQ9BW72 106 aa15.33■□□□□ 0.05
VRK2-202ENST00000412104 SMIM29Q86T20 159 aa15.33■□□□□ 0.04
VRK2-202ENST00000412104 C3orf84H3BNL1 204 aa15.31■□□□□ 0.04
VRK2-202ENST00000412104 SPACA4Q8TDM5 124 aa15.31■□□□□ 0.04
VRK2-202ENST00000412104 A0A1W2PNM2 257 aa15.3■□□□□ 0.04
VRK2-202ENST00000412104 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.3■□□□□ 0.04
VRK2-202ENST00000412104 FUSP35637 526 aaKnown RBP eCLIP15.29■□□□□ 0.04
VRK2-202ENST00000412104 H0Y9J4 135 aa15.29■□□□□ 0.04
VRK2-202ENST00000412104 DPH3Q96FX2 82 aa15.29■□□□□ 0.04
VRK2-202ENST00000412104 EPM2AB3EWF7 344 aa15.28■□□□□ 0.04
VRK2-202ENST00000412104 SCXQ7RTU7 201 aa15.27■□□□□ 0.04
VRK2-202ENST00000412104 RTL8CO15255 209 aa15.26■□□□□ 0.03
VRK2-202ENST00000412104 Q8NBF4 154 aa15.26■□□□□ 0.03
VRK2-202ENST00000412104 KMT2AQ03164 3969 aa15.26■□□□□ 0.03
VRK2-202ENST00000412104 NREPQ16612 68 aa15.25■□□□□ 0.03
VRK2-202ENST00000412104 F8WEM9 126 aa15.25■□□□□ 0.03
VRK2-202ENST00000412104 UQCRQO14949 82 aa15.25■□□□□ 0.03
VRK2-202ENST00000412104 COX7CP15954 63 aa15.25■□□□□ 0.03
VRK2-202ENST00000412104 KRTAP21-3Q3LHN1 58 aa15.25■□□□□ 0.03
VRK2-202ENST00000412104 A0A1B0GW54 56 aa15.24■□□□□ 0.03
VRK2-202ENST00000412104 LINC00476Q8WZB0 136 aa15.23■□□□□ 0.03
VRK2-202ENST00000412104 FBN3Q75N90 2809 aa15.23■□□□□ 0.03
VRK2-202ENST00000412104 UBE2AP49459 152 aa15.23■□□□□ 0.03
VRK2-202ENST00000412104 C1orf134Q5TEV5 83 aa15.23■□□□□ 0.03
VRK2-202ENST00000412104 LY6G6CO95867 125 aa15.22■□□□□ 0.03
VRK2-202ENST00000412104 BCE1O60756 84 aa15.21■□□□□ 0.02
VRK2-202ENST00000412104 SPRR4Q96PI1 79 aa15.21■□□□□ 0.02
VRK2-202ENST00000412104 SERP2Q8N6R1 65 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms