RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 KRTAP7-1Q8IUC3 87 aa13.35□□□□□ -0.27
TPM1-208ENST00000404484 A0A1B0GX51 115 aa13.34□□□□□ -0.27
TPM1-208ENST00000404484 C9JAW5 83 aa13.34□□□□□ -0.27
TPM1-208ENST00000404484 M0QXV9 152 aa13.34□□□□□ -0.27
TPM1-208ENST00000404484 KCNQ1DNQ9H478 68 aa13.34□□□□□ -0.27
TPM1-208ENST00000404484 DNAH5Q8TE73 4624 aa13.33□□□□□ -0.27
TPM1-208ENST00000404484 LINC00167Q96N53 147 aa13.33□□□□□ -0.28
TPM1-208ENST00000404484 PRO0461Q9UI25 63 aa13.33□□□□□ -0.28
TPM1-208ENST00000404484 PRYO14603 147 aa13.32□□□□□ -0.28
TPM1-208ENST00000404484 CHTF8P0CG12 524 aa13.32□□□□□ -0.28
TPM1-208ENST00000404484 FAM218AQ96MZ4 157 aa13.32□□□□□ -0.28
TPM1-208ENST00000404484 IGLV1-50A0A075B6I6 118 aa13.32□□□□□ -0.28
TPM1-208ENST00000404484 A0A1W2PNN7 141 aa13.32□□□□□ -0.28
TPM1-208ENST00000404484 DNAL4O96015 105 aa13.32□□□□□ -0.28
TPM1-208ENST00000404484 SLC25A20O43772 301 aa13.31□□□□□ -0.28
TPM1-208ENST00000404484 FUSP35637 526 aaKnown RBP eCLIP13.31□□□□□ -0.28
TPM1-208ENST00000404484 MTURNQ8N3F0 131 aa13.3□□□□□ -0.28
TPM1-208ENST00000404484 HERC2O95714 4834 aa13.29□□□□□ -0.28
TPM1-208ENST00000404484 A0A087WYN8 130 aa13.29□□□□□ -0.28
TPM1-208ENST00000404484 COX7BP24311 80 aa13.29□□□□□ -0.28
TPM1-208ENST00000404484 SPACA4Q8TDM5 124 aa13.29□□□□□ -0.28
TPM1-208ENST00000404484 H3BT86 120 aa13.28□□□□□ -0.28
TPM1-208ENST00000404484 RPL37AP8A6NKH3 93 aa13.28□□□□□ -0.28
TPM1-208ENST00000404484 ELOF1P60002 83 aaKnown RBP13.28□□□□□ -0.28
TPM1-208ENST00000404484 DPH3Q96FX2 82 aa13.28□□□□□ -0.28
TPM1-208ENST00000404484 LINC00575Q6W349 94 aa13.27□□□□□ -0.29
TPM1-208ENST00000404484 ANKRD29Q8N6D5 301 aa13.26□□□□□ -0.29
TPM1-208ENST00000404484 LINC01600Q96MT4 127 aa13.25□□□□□ -0.29
TPM1-208ENST00000404484 SMCPP49901 116 aaPredicted RBP13.24□□□□□ -0.29
TPM1-208ENST00000404484 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.24□□□□□ -0.29
TPM1-208ENST00000404484 RYR1P21817 5038 aa13.24□□□□□ -0.29
TPM1-208ENST00000404484 SPRR1AP35321 89 aa13.24□□□□□ -0.29
TPM1-208ENST00000404484 hADV29S1A0JD25 119 aa13.23□□□□□ -0.29
TPM1-208ENST00000404484 ETDCA0A1B0GVM5 59 aa13.22□□□□□ -0.29
TPM1-208ENST00000404484 EPM2AB3EWF7 344 aa13.22□□□□□ -0.29
TPM1-208ENST00000404484 PANO1I0J062 215 aa13.22□□□□□ -0.29
TPM1-208ENST00000404484 REG3GQ6UW15 175 aa13.22□□□□□ -0.29
TPM1-208ENST00000404484 UBE2BP63146 152 aa13.21□□□□□ -0.29
TPM1-208ENST00000404484 LINC00528Q8N1L1 170 aa13.2□□□□□ -0.3
TPM1-208ENST00000404484 HSPG2P98160 4391 aa13.2□□□□□ -0.3
TPM1-208ENST00000404484 BAALC-AS2P0C853 105 aa13.2□□□□□ -0.3
TPM1-208ENST00000404484 INAFM2P0DMQ5 153 aa13.2□□□□□ -0.3
TPM1-208ENST00000404484 PHF5AQ7RTV0 110 aaKnown RBP13.2□□□□□ -0.3
TPM1-208ENST00000404484 ORMDL1Q9P0S3 153 aa13.2□□□□□ -0.3
TPM1-208ENST00000404484 APOBP04114 4563 aaKnown RBP13.19□□□□□ -0.3
TPM1-208ENST00000404484 ETDBQ3ZM63 59 aa13.19□□□□□ -0.3
TPM1-208ENST00000404484 KRTAP4-16G5E9R7 235 aaPredicted RBP13.18□□□□□ -0.3
TPM1-208ENST00000404484 TEN1Q86WV5 123 aa13.18□□□□□ -0.3
TPM1-208ENST00000404484 GHRHP01286 108 aa13.17□□□□□ -0.3
TPM1-208ENST00000404484 Q6ZRX8 168 aa13.17□□□□□ -0.3
TPM1-208ENST00000404484 PLAC8Q9NZF1 115 aa13.17□□□□□ -0.3
TPM1-208ENST00000404484 B5MCH6 92 aa13.16□□□□□ -0.3
TPM1-208ENST00000404484 H3BQ85 93 aa13.16□□□□□ -0.3
TPM1-208ENST00000404484 CDK2AP2O75956 126 aa13.16□□□□□ -0.3
TPM1-208ENST00000404484 DHRS4-AS1Q9P1J3 65 aa13.16□□□□□ -0.3
TPM1-208ENST00000404484 KRTAP10-1P60331 282 aa13.15□□□□□ -0.3
TPM1-208ENST00000404484 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.15□□□□□ -0.3
TPM1-208ENST00000404484 OCIAD2Q56VL3 154 aa13.14□□□□□ -0.31
TPM1-208ENST00000404484 TMEM256-PLSCR3K7ERE1 68 aa13.12□□□□□ -0.31
TPM1-208ENST00000404484 Q6ZQY7 126 aa13.11□□□□□ -0.31
TPM1-208ENST00000404484 KRTAP17-1Q9BYP8 105 aa13.11□□□□□ -0.31
TPM1-208ENST00000404484 PPDPFLQ8WWR9 84 aa13.1□□□□□ -0.31
TPM1-208ENST00000404484 FAM19A1Q7Z5A9 133 aa13.09□□□□□ -0.31
TPM1-208ENST00000404484 J3QR89 54 aa13.07□□□□□ -0.32
TPM1-208ENST00000404484 K7ERU9 68 aa13.07□□□□□ -0.32
TPM1-208ENST00000404484 XGP55808 180 aa13.07□□□□□ -0.32
TPM1-208ENST00000404484 Q6ZSA8 131 aa13.07□□□□□ -0.32
TPM1-208ENST00000404484 Q9BRP9 147 aa13.07□□□□□ -0.32
TPM1-208ENST00000404484 H0Y9J4 135 aa13.06□□□□□ -0.32
TPM1-208ENST00000404484 KRTAP11-1Q8IUC1 163 aa13.06□□□□□ -0.32
TPM1-208ENST00000404484 BCE1O60756 84 aa13.05□□□□□ -0.32
TPM1-208ENST00000404484 DNAH8Q96JB1 4490 aa13.03□□□□□ -0.32
TPM1-208ENST00000404484 TEX49A0A1B0GTD5 131 aa13.03□□□□□ -0.32
TPM1-208ENST00000404484 FAM30AQ9NZY2 134 aa13.03□□□□□ -0.32
TPM1-208ENST00000404484 UBE2AP49459 152 aa13.02□□□□□ -0.33
TPM1-208ENST00000404484 KRTAP4-5Q9BYR2 181 aa13.02□□□□□ -0.33
TPM1-208ENST00000404484 PRLHP81277 87 aa13.01□□□□□ -0.33
TPM1-208ENST00000404484 JMJD7-PLA2G4BH0Y9G9 81 aa13□□□□□ -0.33
TPM1-208ENST00000404484 CIRBP-AS1Q8TBR5 109 aa13□□□□□ -0.33
TPM1-208ENST00000404484 SMCR5Q8TEV8 140 aa13□□□□□ -0.33
TPM1-208ENST00000404484 PCLOQ9Y6V0 5065 aa13□□□□□ -0.33
TPM1-208ENST00000404484 HAMPP81172 84 aa12.98□□□□□ -0.33
TPM1-208ENST00000404484 SCXQ7RTU7 201 aa12.98□□□□□ -0.33
TPM1-208ENST00000404484 Q8N1X5 172 aa12.98□□□□□ -0.33
TPM1-208ENST00000404484 HIGD2AQ9BW72 106 aa12.98□□□□□ -0.33
TPM1-208ENST00000404484 FAT1Q14517 4588 aa12.97□□□□□ -0.33
TPM1-208ENST00000404484 OBSCN-AS1Q96MR7 158 aa12.97□□□□□ -0.33
TPM1-208ENST00000404484 LAMTOR3Q9UHA4 124 aa12.97□□□□□ -0.33
TPM1-208ENST00000404484 PSORS1C2Q9UIG4 136 aa12.96□□□□□ -0.33
TPM1-208ENST00000404484 ABCA13Q86UQ4 5058 aa12.96□□□□□ -0.34
TPM1-208ENST00000404484 IGLV5-48A0A075B6I7 105 aa12.95□□□□□ -0.34
TPM1-208ENST00000404484 ERC2-IT1O76042 136 aa12.94□□□□□ -0.34
TPM1-208ENST00000404484 KRTAP13-1Q8IUC0 172 aa12.94□□□□□ -0.34
TPM1-208ENST00000404484 DEFB105AQ8NG35 78 aa12.93□□□□□ -0.34
TPM1-208ENST00000404484 C1orf137Q5JT78 98 aa12.92□□□□□ -0.34
TPM1-208ENST00000404484 SMR3BP02814 79 aaPredicted RBP12.91□□□□□ -0.34
TPM1-208ENST00000404484 NDUFV3P56181 108 aaKnown RBP12.91□□□□□ -0.34
TPM1-208ENST00000404484 LINC01547P58512 204 aaPredicted RBP12.91□□□□□ -0.34
TPM1-208ENST00000404484 Q8N377 158 aa12.91□□□□□ -0.34
TPM1-208ENST00000404484 ST20-AS1Q8NBB2 130 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms