RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 LPAP08519 4548 aa10.62□□□□□ -0.71
PTPRN2-204ENST00000404321 C3orf22Q8N5N4 141 aa10.62□□□□□ -0.71
PTPRN2-204ENST00000404321 LINC00308Q8TCZ7 52 aa10.62□□□□□ -0.71
PTPRN2-204ENST00000404321 B5MCH6 92 aa10.61□□□□□ -0.71
PTPRN2-204ENST00000404321 IGLV6-57P01721 117 aa10.61□□□□□ -0.71
PTPRN2-204ENST00000404321 ANKRD39Q53RE8 183 aa10.61□□□□□ -0.71
PTPRN2-204ENST00000404321 PPDPFQ9H3Y8 114 aa10.61□□□□□ -0.71
PTPRN2-204ENST00000404321 TIMM17BO60830 172 aa10.6□□□□□ -0.71
PTPRN2-204ENST00000404321 ZNF706Q9Y5V0 76 aaPredicted RBP10.6□□□□□ -0.71
PTPRN2-204ENST00000404321 RNF213Q63HN8 5207 aa10.59□□□□□ -0.71
PTPRN2-204ENST00000404321 LINC00304Q8N9R0 145 aa10.59□□□□□ -0.71
PTPRN2-204ENST00000404321 TRAV23DV6A0A075B6W5 121 aa10.58□□□□□ -0.72
PTPRN2-204ENST00000404321 ERC2-IT1O76042 136 aa10.58□□□□□ -0.72
PTPRN2-204ENST00000404321 HIST3H2BBQ8N257 126 aa10.57□□□□□ -0.72
PTPRN2-204ENST00000404321 SPANXCQ9NY87 97 aa10.57□□□□□ -0.72
PTPRN2-204ENST00000404321 PCP4L1A6NKN8 68 aa10.56□□□□□ -0.72
PTPRN2-204ENST00000404321 SCGB1D4Q6XE38 83 aa10.56□□□□□ -0.72
PTPRN2-204ENST00000404321 OR13C6PQ8NH95 151 aa10.56□□□□□ -0.72
PTPRN2-204ENST00000404321 HIST1H2BLQ99880 126 aa10.56□□□□□ -0.72
PTPRN2-204ENST00000404321 Q9BRP9 147 aa10.56□□□□□ -0.72
PTPRN2-204ENST00000404321 S100A2P29034 98 aa10.55□□□□□ -0.72
PTPRN2-204ENST00000404321 Q6ZRX8 168 aa10.55□□□□□ -0.72
PTPRN2-204ENST00000404321 ZNF73O43830 326 aaPredicted RBP10.54□□□□□ -0.72
PTPRN2-204ENST00000404321 GAGE2AQ6NT46 116 aa10.54□□□□□ -0.72
PTPRN2-204ENST00000404321 PCP2Q8IVA1 136 aa10.54□□□□□ -0.72
PTPRN2-204ENST00000404321 RETNLBQ9BQ08 111 aa10.53□□□□□ -0.72
PTPRN2-204ENST00000404321 LINC00483Q53H64 154 aa10.5□□□□□ -0.73
PTPRN2-204ENST00000404321 SPANXDQ9BXN6 97 aa10.5□□□□□ -0.73
PTPRN2-204ENST00000404321 CTAG1AP78358 180 aa10.49□□□□□ -0.73
PTPRN2-204ENST00000404321 JOSD1Q15040 202 aaPredicted RBP10.49□□□□□ -0.73
PTPRN2-204ENST00000404321 Q8NBF4 154 aa10.48□□□□□ -0.73
PTPRN2-204ENST00000404321 IGLV9-49A0A0B4J1Y8 123 aa10.47□□□□□ -0.73
PTPRN2-204ENST00000404321 HINT1P49773 126 aaPredicted RBP10.47□□□□□ -0.73
PTPRN2-204ENST00000404321 ST20-AS1Q8NBB2 130 aa10.47□□□□□ -0.73
PTPRN2-204ENST00000404321 MUSTN1Q8IVN3 82 aa10.46□□□□□ -0.74
PTPRN2-204ENST00000404321 CBY1Q9Y3M2 126 aa10.46□□□□□ -0.74
PTPRN2-204ENST00000404321 MOBPQ13875 183 aa10.45□□□□□ -0.74
PTPRN2-204ENST00000404321 C4orf48Q5BLP8 95 aa10.44□□□□□ -0.74
PTPRN2-204ENST00000404321 HSBP1L1C9JCN9 74 aa10.43□□□□□ -0.74
PTPRN2-204ENST00000404321 IFITM1P13164 125 aa10.43□□□□□ -0.74
PTPRN2-204ENST00000404321 C6orf99Q4VX62 202 aa10.43□□□□□ -0.74
PTPRN2-204ENST00000404321 SPAG11AQ6PDA7 123 aa10.43□□□□□ -0.74
PTPRN2-204ENST00000404321 PYY3Q5JQD4 70 aa10.42□□□□□ -0.74
PTPRN2-204ENST00000404321 COPS9Q8WXC6 57 aa10.42□□□□□ -0.74
PTPRN2-204ENST00000404321 A6NDN8 102 aa10.41□□□□□ -0.74
PTPRN2-204ENST00000404321 Q6ZVH6 145 aa10.41□□□□□ -0.74
PTPRN2-204ENST00000404321 SCGB1D1O95968 90 aa10.4□□□□□ -0.74
PTPRN2-204ENST00000404321 COX7BP24311 80 aa10.4□□□□□ -0.74
PTPRN2-204ENST00000404321 C9orf153Q5TBE3 101 aa10.39□□□□□ -0.75
PTPRN2-204ENST00000404321 DHRS4-AS1Q9P1J3 65 aa10.39□□□□□ -0.75
PTPRN2-204ENST00000404321 IGLV7-46A0A075B6I9 117 aa10.38□□□□□ -0.75
PTPRN2-204ENST00000404321 ELOF1P60002 83 aaKnown RBP10.38□□□□□ -0.75
PTPRN2-204ENST00000404321 SSBP3-AS1Q7Z2R9 100 aa10.36□□□□□ -0.75
PTPRN2-204ENST00000404321 SPINK1P00995 79 aa10.34□□□□□ -0.75
PTPRN2-204ENST00000404321 TSTD3H0UI37 97 aa10.33□□□□□ -0.76
PTPRN2-204ENST00000404321 DEFB105AQ8NG35 78 aa10.33□□□□□ -0.76
PTPRN2-204ENST00000404321 TRAV13-2A0A0B4J235 113 aa10.32□□□□□ -0.76
PTPRN2-204ENST00000404321 SMIM11BQ8TCY0 68 aa10.31□□□□□ -0.76
PTPRN2-204ENST00000404321 A0A1B0GWB2 263 aa10.3□□□□□ -0.76
PTPRN2-204ENST00000404321 SPRR1BP22528 89 aa10.3□□□□□ -0.76
PTPRN2-204ENST00000404321 TRBV7-6A0A0J9YX20 115 aa10.29□□□□□ -0.76
PTPRN2-204ENST00000404321 A4D1N5 150 aa10.29□□□□□ -0.76
PTPRN2-204ENST00000404321 TAL2Q16559 108 aa10.29□□□□□ -0.76
PTPRN2-204ENST00000404321 CDIP1Q9H305 208 aa10.29□□□□□ -0.76
PTPRN2-204ENST00000404321 TPRXLQ17RH7 258 aa10.28□□□□□ -0.76
PTPRN2-204ENST00000404321 Q1RN00 199 aa10.28□□□□□ -0.76
PTPRN2-204ENST00000404321 COX8AP10176 69 aa10.27□□□□□ -0.76
PTPRN2-204ENST00000404321 SLC25A34Q6PIV7 304 aa10.27□□□□□ -0.76
PTPRN2-204ENST00000404321 LAMTOR3Q9UHA4 124 aa10.27□□□□□ -0.76
PTPRN2-204ENST00000404321 MUC2Q02817 5179 aa10.27□□□□□ -0.77
PTPRN2-204ENST00000404321 FP248Q71RG6 208 aaPredicted RBP10.26□□□□□ -0.77
PTPRN2-204ENST00000404321 HRCT1Q6UXD1 115 aa10.26□□□□□ -0.77
PTPRN2-204ENST00000404321 Q8N377 158 aa10.26□□□□□ -0.77
PTPRN2-204ENST00000404321 HIST1H4GQ99525 98 aa10.26□□□□□ -0.77
PTPRN2-204ENST00000404321 TEX49A0A1B0GTD5 131 aa10.25□□□□□ -0.77
PTPRN2-204ENST00000404321 C14orf144Q96I85 54 aa10.25□□□□□ -0.77
PTPRN2-204ENST00000404321 PAM16Q9Y3D7 125 aa10.25□□□□□ -0.77
PTPRN2-204ENST00000404321 RPS29P62273 56 aaKnown RBP10.24□□□□□ -0.77
PTPRN2-204ENST00000404321 SLC25A20O43772 301 aa10.22□□□□□ -0.77
PTPRN2-204ENST00000404321 LINC01547P58512 204 aaPredicted RBP10.22□□□□□ -0.77
PTPRN2-204ENST00000404321 SPATA45Q537H7 98 aa10.22□□□□□ -0.77
PTPRN2-204ENST00000404321 PRO1933Q9H354 126 aa10.22□□□□□ -0.77
PTPRN2-204ENST00000404321 DLEU1O43261 78 aa10.2□□□□□ -0.78
PTPRN2-204ENST00000404321 VAMP3Q15836 100 aa10.2□□□□□ -0.78
PTPRN2-204ENST00000404321 KRTAP13-3Q3SY46 172 aa10.2□□□□□ -0.78
PTPRN2-204ENST00000404321 SMIM29Q86T20 159 aa10.2□□□□□ -0.78
PTPRN2-204ENST00000404321 VAMP8Q9BV40 100 aa10.2□□□□□ -0.78
PTPRN2-204ENST00000404321 IGLV5-48A0A075B6I7 105 aa10.19□□□□□ -0.78
PTPRN2-204ENST00000404321 NHP2Q9NX24 153 aaKnown RBP10.19□□□□□ -0.78
PTPRN2-204ENST00000404321 A0A0G2JQZ4 141 aa10.17□□□□□ -0.78
PTPRN2-204ENST00000404321 LINC00575Q6W349 94 aa10.16□□□□□ -0.78
PTPRN2-204ENST00000404321 H7C2G1 150 aa10.15□□□□□ -0.78
PTPRN2-204ENST00000404321 C2orf91Q6ZV80 131 aa10.14□□□□□ -0.79
PTPRN2-204ENST00000404321 MUC17Q685J3 4493 aa10.13□□□□□ -0.79
PTPRN2-204ENST00000404321 hADV29S1A0JD25 119 aa10.13□□□□□ -0.79
PTPRN2-204ENST00000404321 Q6ZQY7 126 aa10.13□□□□□ -0.79
PTPRN2-204ENST00000404321 LIMD2Q9BT23 127 aa10.13□□□□□ -0.79
PTPRN2-204ENST00000404321 HIGD1BQ9P298 99 aa10.13□□□□□ -0.79
PTPRN2-204ENST00000404321 CFC1BP0CG36 223 aa10.12□□□□□ -0.79
PTPRN2-204ENST00000404321 CFC1P0CG37 223 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms